Definition | Rhodopseudomonas palustris HaA2, complete genome. |
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Accession | NC_007778 |
Length | 5,331,656 |
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The map label for this gene is 86751012
Identifier: 86751012
GI number: 86751012
Start: 4456409
End: 4456669
Strand: Reverse
Name: 86751012
Synonym: RPB_3904
Alternate gene names: NA
Gene position: 4456669-4456409 (Counterclockwise)
Preceding gene: 86751013
Following gene: 86751011
Centisome position: 83.59
GC content: 59.77
Gene sequence:
>261_bases ATGAGCGAATTCGCAACCCTCAGTCTAACCCGGACCGTGATCGACGCGGCTGCCGACCGCGCCAGGCAGCAAGGGCTCAC GACCGAGGACTACGTGATGCAGGTTCTGCTGCGTGAATTGGAAATCGGACCGAATGAACTCATTCTCCTGGCTTACGATG CCGCTCGGCCAGGATCCGGATTCGTTCTTGACCGCGACAGCGATGAGAGCGACGACGACTATCAGGCGCGTTCTTCGACG CTCGACCGTCTCTTCCCCTGA
Upstream 100 bases:
>100_bases GGTTGCAGGTTCGAGTCCTGCCGGGCCCACCAAGCATACCCGCAGCAGTGTTCGCATTCGGATTCAATTCCACCTATATT GACCGGATTGGAGGTCGCTC
Downstream 100 bases:
>100_bases GCCATGAGAGCCGGTGACTACGTCCGGTGCAATTTTCCCTTCAGGGAGGTGGCCGGCCCCGGCCCATCGGCTCACATCGT CATCTGTATCGGCACCGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 86; Mature: 85
Protein sequence:
>86_residues MSEFATLSLTRTVIDAAADRARQQGLTTEDYVMQVLLRELEIGPNELILLAYDAARPGSGFVLDRDSDESDDDYQARSST LDRLFP
Sequences:
>Translated_86_residues MSEFATLSLTRTVIDAAADRARQQGLTTEDYVMQVLLRELEIGPNELILLAYDAARPGSGFVLDRDSDESDDDYQARSST LDRLFP >Mature_85_residues SEFATLSLTRTVIDAAADRARQQGLTTEDYVMQVLLRELEIGPNELILLAYDAARPGSGFVLDRDSDESDDDYQARSSTL DRLFP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9598; Mature: 9467
Theoretical pI: Translated: 3.95; Mature: 3.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEFATLSLTRTVIDAAADRARQQGLTTEDYVMQVLLRELEIGPNELILLAYDAARPGSG CCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCC FVLDRDSDESDDDYQARSSTLDRLFP EEEECCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure SEFATLSLTRTVIDAAADRARQQGLTTEDYVMQVLLRELEIGPNELILLAYDAARPGSG CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCC FVLDRDSDESDDDYQARSSTLDRLFP EEEECCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA