Definition | Rhodopseudomonas palustris HaA2, complete genome. |
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Accession | NC_007778 |
Length | 5,331,656 |
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The map label for this gene is ordL [H]
Identifier: 86750931
GI number: 86750931
Start: 4367646
End: 4369109
Strand: Reverse
Name: ordL [H]
Synonym: RPB_3822
Alternate gene names: 86750931
Gene position: 4369109-4367646 (Counterclockwise)
Preceding gene: 86750934
Following gene: 86750930
Centisome position: 81.95
GC content: 72.81
Gene sequence:
>1464_bases ATGACCCCTCCGGCGACAAGTGCGACCAATGGACCGGACCCGTTCGCGCCCGACACGGCGGCGAATCCGCACGCGCGGCT GACCTTCGACCTCGACGTCGACCTGTGCGTGATCGGCGCCGGCCTGGCCGGATTGTCGGTGGCGCTGGAGGCGGCGCAGC AGGGCCTCAGCGTCGCCGTGCTCGAAGCGCGGCGGGTCGGCTGGGGCGCGTCCGGCGCCACGCTCGGCAGCGTGATGCCG GGCTACGGCGTGCCGATCGGCGACCTGATCGAACGGATCGGCGTCGCCCACACGGGCGAATTGTGGACATTGTCGCGCGA GGGCATGGCGATCGTCCGCGCGCGCGCCACCGAGGAGACGATGCCGGGCATCGCGCTGACGACGGGCGCGCTCGAAGTCT CCAATGTCGATCTCGGCGACCGGCTGATCGATCGGTTGCAGACGCTCGGCGTCGATTTCGGCACCGCGGTCGAGGGCTGG CAGATCGAGCGCGTGCGCGACATGCTGCGGACCAACCGCTATTTCCACGGCATCCATTTTCCCGACGCGTTCCAGCTCGA TGGCCGCCGCTATGTTCGCGGGCTGGAGGCGATGGCGCGACGCGCCGGCGTCCGGATCTTCGAGGACACGCCGGCGCTCG GGATCGACTTCTCCGGCATCCGCAAGCGCGTGGCCACGCCGAACGCGCGGCTGCGCGCCTCCGACATCGTGCTCGCCGGC AATGTCGATCTCGGCGCGCCGTCGCCGCGGCTGACCGCGACGCTGCTGCCGATGTGGCGCGCCGCCGTGCTCACCGAGCC GCTCGGGGAGCGCCTGGCCGACGCGATCGCCTTTGCCGGCTCGATTGCCGATACCGACGGCGTCGATCACTACCGCATCG TCGGCGGCGACCGGCTGCTGTGGACCGGGCCGGAGACGACGTTCGAGGTCGCACCGAAGCGGCTCGAGGGCCTGATCCGG CGGCGGATCGCGGCGCTGTATCCGCAACTCGGCGCCGTGGCGATCGCGCAAAGCTGGAGCGGGGCGATCGGCCAGACCGT GCACGGCATGCCGCAGATCGGCGAATTGCGCCGCGGGCTGTGGGTGGCGAGCGGGTTCGGCCGACAGGGGCTGGCGACCA CCGCGATCGCCGGCCGGCTGATCGCGCAGGGCATCGTCCATGGCGACCAGCGCTGGCGGCTGTTCGATCCGTTCGAACTG GTCTGGGCCGGCGGCCGGATCGGCCGCGTTGTCGGCCAGGGCGTCAGCATCGTCGAACGCCGCGCCGCGATGACCGCGGG CCTGCTGGCGCGCTATCGCGAACGCGCCGCCGTGCGCAGCCGGCTCCGCGAGGAGCGGCTGCAGGCCGCCAACAGCCGCG TGCGAAGTGCCGGGGGGCAGCGGCGGGCTGACGCGCCGCCGCGGGATCGCGCCGAGCCCGGCGCACAGGACGCCCGCCGC GGTGAACCCGGCCCGATCGAGTGA
Upstream 100 bases:
>100_bases CGGCGCATGGATCCCTTCCGGCGGCGCGAGCTTGCGGATTAATCGAGAACCCGGGACAGGACAAGGTGACAAGCGCCCGG GCTGTCCGTAAGGAAACGTC
Downstream 100 bases:
>100_bases TCTTGCCGCAGCGCACGCCGCGCTTGCTCGCGACAATGTGAGCGCGCCGGCAGGGCGCTGATGTAACTTTGAGGGTGCCG CCTGCGTATCTCGGACCAAG
Product: FAD dependent oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 487; Mature: 486
Protein sequence:
>487_residues MTPPATSATNGPDPFAPDTAANPHARLTFDLDVDLCVIGAGLAGLSVALEAAQQGLSVAVLEARRVGWGASGATLGSVMP GYGVPIGDLIERIGVAHTGELWTLSREGMAIVRARATEETMPGIALTTGALEVSNVDLGDRLIDRLQTLGVDFGTAVEGW QIERVRDMLRTNRYFHGIHFPDAFQLDGRRYVRGLEAMARRAGVRIFEDTPALGIDFSGIRKRVATPNARLRASDIVLAG NVDLGAPSPRLTATLLPMWRAAVLTEPLGERLADAIAFAGSIADTDGVDHYRIVGGDRLLWTGPETTFEVAPKRLEGLIR RRIAALYPQLGAVAIAQSWSGAIGQTVHGMPQIGELRRGLWVASGFGRQGLATTAIAGRLIAQGIVHGDQRWRLFDPFEL VWAGGRIGRVVGQGVSIVERRAAMTAGLLARYRERAAVRSRLREERLQAANSRVRSAGGQRRADAPPRDRAEPGAQDARR GEPGPIE
Sequences:
>Translated_487_residues MTPPATSATNGPDPFAPDTAANPHARLTFDLDVDLCVIGAGLAGLSVALEAAQQGLSVAVLEARRVGWGASGATLGSVMP GYGVPIGDLIERIGVAHTGELWTLSREGMAIVRARATEETMPGIALTTGALEVSNVDLGDRLIDRLQTLGVDFGTAVEGW QIERVRDMLRTNRYFHGIHFPDAFQLDGRRYVRGLEAMARRAGVRIFEDTPALGIDFSGIRKRVATPNARLRASDIVLAG NVDLGAPSPRLTATLLPMWRAAVLTEPLGERLADAIAFAGSIADTDGVDHYRIVGGDRLLWTGPETTFEVAPKRLEGLIR RRIAALYPQLGAVAIAQSWSGAIGQTVHGMPQIGELRRGLWVASGFGRQGLATTAIAGRLIAQGIVHGDQRWRLFDPFEL VWAGGRIGRVVGQGVSIVERRAAMTAGLLARYRERAAVRSRLREERLQAANSRVRSAGGQRRADAPPRDRAEPGAQDARR GEPGPIE >Mature_486_residues TPPATSATNGPDPFAPDTAANPHARLTFDLDVDLCVIGAGLAGLSVALEAAQQGLSVAVLEARRVGWGASGATLGSVMPG YGVPIGDLIERIGVAHTGELWTLSREGMAIVRARATEETMPGIALTTGALEVSNVDLGDRLIDRLQTLGVDFGTAVEGWQ IERVRDMLRTNRYFHGIHFPDAFQLDGRRYVRGLEAMARRAGVRIFEDTPALGIDFSGIRKRVATPNARLRASDIVLAGN VDLGAPSPRLTATLLPMWRAAVLTEPLGERLADAIAFAGSIADTDGVDHYRIVGGDRLLWTGPETTFEVAPKRLEGLIRR RIAALYPQLGAVAIAQSWSGAIGQTVHGMPQIGELRRGLWVASGFGRQGLATTAIAGRLIAQGIVHGDQRWRLFDPFELV WAGGRIGRVVGQGVSIVERRAAMTAGLLARYRERAAVRSRLREERLQAANSRVRSAGGQRRADAPPRDRAEPGAQDARRG EPGPIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787559, Length=415, Percent_Identity=29.1566265060241, Blast_Score=121, Evalue=1e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006076 [H]
Pfam domain/function: PF01266 DAO [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 52198; Mature: 52067
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPPATSATNGPDPFAPDTAANPHARLTFDLDVDLCVIGAGLAGLSVALEAAQQGLSVAV CCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEECCCHHHHHHHHHHHHCCCEEEE LEARRVGWGASGATLGSVMPGYGVPIGDLIERIGVAHTGELWTLSREGMAIVRARATEET EHHHHCCCCCCCCHHHHCCCCCCCCHHHHHHHHCCCCCCCEEEECCCCEEEEEECCCHHH MPGIALTTGALEVSNVDLGDRLIDRLQTLGVDFGTAVEGWQIERVRDMLRTNRYFHGIHF CCCEEEEECCEEECCCCHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHCCCEEECCC PDAFQLDGRRYVRGLEAMARRAGVRIFEDTPALGIDFSGIRKRVATPNARLRASDIVLAG CCCEECCCHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHCCCCCCEEECCEEEEC NVDLGAPSPRLTATLLPMWRAAVLTEPLGERLADAIAFAGSIADTDGVDHYRIVGGDRLL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCEEE WTGPETTFEVAPKRLEGLIRRRIAALYPQLGAVAIAQSWSGAIGQTVHGMPQIGELRRGL ECCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHCE WVASGFGRQGLATTAIAGRLIAQGIVHGDQRWRLFDPFELVWAGGRIGRVVGQGVSIVER EEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCHHHEECCCHHHHHHHCCHHHHHH RAAMTAGLLARYRERAAVRSRLREERLQAANSRVRSAGGQRRADAPPRDRAEPGAQDARR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCC GEPGPIE CCCCCCC >Mature Secondary Structure TPPATSATNGPDPFAPDTAANPHARLTFDLDVDLCVIGAGLAGLSVALEAAQQGLSVAV CCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEECCCHHHHHHHHHHHHCCCEEEE LEARRVGWGASGATLGSVMPGYGVPIGDLIERIGVAHTGELWTLSREGMAIVRARATEET EHHHHCCCCCCCCHHHHCCCCCCCCHHHHHHHHCCCCCCCEEEECCCCEEEEEECCCHHH MPGIALTTGALEVSNVDLGDRLIDRLQTLGVDFGTAVEGWQIERVRDMLRTNRYFHGIHF CCCEEEEECCEEECCCCHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHCCCEEECCC PDAFQLDGRRYVRGLEAMARRAGVRIFEDTPALGIDFSGIRKRVATPNARLRASDIVLAG CCCEECCCHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHCCCCCCEEECCEEEEC NVDLGAPSPRLTATLLPMWRAAVLTEPLGERLADAIAFAGSIADTDGVDHYRIVGGDRLL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCEEE WTGPETTFEVAPKRLEGLIRRRIAALYPQLGAVAIAQSWSGAIGQTVHGMPQIGELRRGL ECCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHCE WVASGFGRQGLATTAIAGRLIAQGIVHGDQRWRLFDPFELVWAGGRIGRVVGQGVSIVER EEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCHHHEECCCHHHHHHHCCHHHHHH RAAMTAGLLARYRERAAVRSRLREERLQAANSRVRSAGGQRRADAPPRDRAEPGAQDARR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCC GEPGPIE CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]