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The map label for this gene is 86750929

Identifier: 86750929

GI number: 86750929

Start: 4365335

End: 4366828

Strand: Reverse

Name: 86750929

Synonym: RPB_3820

Alternate gene names: NA

Gene position: 4366828-4365335 (Counterclockwise)

Preceding gene: 86750930

Following gene: 86750926

Centisome position: 81.9

GC content: 67.74

Gene sequence:

>1494_bases
ATGGATCGAGTTTTGTCCCGGTGGGGGTTTTCCATCGGTCTGTCGGCGTTGGTCGTGGCCGCGCTGGTGTTGCCGGTGGT
GCTCGCTGCGTTGGTGTTTCCCACACCGCTCTACGACACCCGCGAACTGGTCGCCTGGGGCCGGCATTTTCCGCTGCTGA
CGCCTGTGCATCCGCCGATGATGGTGTGGGCCGGCGGCGCGGTGGATCGCCTGTTCGGGCCGTCCGGCACGGCGATCGTG
TTCGTCAACCAGATCTGCCTCGCGATCGGGCTCGGCTATCTCTACGCCACGCTACGGCTGCTGGTCGACCGGGCGATGGC
GGCCTACGTCCTGGCGCTCGCCGCGGCGTCGTTCTACGTCGTGTTCGCGCCGCTGTCGTGGGCGCTCAATGCCGACATCC
TGCAGCTCATGTCCTGGCCGGCGGTGCTGTATCACTTCCTGCGCGGGCGCAGCACCGATCGCTGGCTGCATTGGATCCTG
CTCGGCATCTGGGCGGCGATCGCGGCGCTGACGAAGTACAACGCCGCCGTGCTGTTCCTGGCGATGGCGGCGGGCATCGT
CGCGGTGCCGTCGGTTCGCGCCTGCCTGCGCCGGCCGGGGCCCTATGTGGCAGTGCTGGTCGGCGCGCTGTTGTTCCTGC
CGCACGCGATCGCGGCCTGGCGCTACGGCACCACCATCGCCTATGGCGAGCGGCATTTCACCGGCTTCGGTTCGGTTGCG
GACACCGCGCGGCGGCTCGGCCTGCTGGTCGCCGGCTATCTGCCGCTGCTGCTGCCCGGCGCGATCGTGCTGGCGATCGC
GGTCGGGCGGCGGATGATCGCGTGGCGGGTGCCGCGGTTTGCCGAGGCCAGTGACGAACTCAAGTTCATCGTCATCGTCA
ATGTCGCGATGTTCGCCGTGCTGGTGGTGCTGATCGCCGGCTGCGGTCTGGAATACATCGCCCGCTACGGCGCGCCATTC
GCCGAACTCGCGGTGCTGGCGCTGGCGCCGCTGTTCACCTGGAACGAGTCGCGGCGCGCCGTGGCGGTGCGCCAGACCGT
GCAGTCGCTCGGCGTGCTGTATGCTGTGCTCGCCGCCGGGGCTTCGGTCGTCTATCTGTTGTTCGCCTCGCATAGCGGGC
TGCAGGAGCCGACCGCGCAGGCGGCGCGCGTCATCCTTGCCGACTGGAACAGCAAGTACAAATGCGGTCCCGGTTACTAT
CTGGGCGACCGCCAGACCGTCTACGGCATCGGCATCGCCGCCGGCCCCGACGGCGATTCGATGACCATCAACTTCATTCC
GAAGGCGCGCTGGTTCGATACGGCGAAACTCGAAGCGAACGGCGCGGTGCTGGTCTACACGCTGCCGCAGGTCCCCGGCG
ATTTCGCCACGGCGTTTCCCGGTGCGACGATGTCCGAGGAAAAGCGCATCAGCGTGCCGGTGCTGCGCACCCACACCGGC
AAAACCAAGGACTACTTCTATCGCTTCGTCGCGCCGAAGGCGTGCACGGGCTGA

Upstream 100 bases:

>100_bases
AGGTTTTCAAGCCGCGAAAGCCTCCGGCTCGATTGACAAGGCTGCGCCACCTCGCATCTAACCGCCACAATTCAACATCT
GGAAATGTTGCGGCTGGCGG

Downstream 100 bases:

>100_bases
GGCCGGAGAGCCTTCGCTCACCGCGCGAGCGCGGACCATTTCTCGGCGGCGGCGATCGCGGCGGGACGCAGCGTATCGGC
CGGCAGGCCGCGGTGCAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 497; Mature: 497

Protein sequence:

>497_residues
MDRVLSRWGFSIGLSALVVAALVLPVVLAALVFPTPLYDTRELVAWGRHFPLLTPVHPPMMVWAGGAVDRLFGPSGTAIV
FVNQICLAIGLGYLYATLRLLVDRAMAAYVLALAAASFYVVFAPLSWALNADILQLMSWPAVLYHFLRGRSTDRWLHWIL
LGIWAAIAALTKYNAAVLFLAMAAGIVAVPSVRACLRRPGPYVAVLVGALLFLPHAIAAWRYGTTIAYGERHFTGFGSVA
DTARRLGLLVAGYLPLLLPGAIVLAIAVGRRMIAWRVPRFAEASDELKFIVIVNVAMFAVLVVLIAGCGLEYIARYGAPF
AELAVLALAPLFTWNESRRAVAVRQTVQSLGVLYAVLAAGASVVYLLFASHSGLQEPTAQAARVILADWNSKYKCGPGYY
LGDRQTVYGIGIAAGPDGDSMTINFIPKARWFDTAKLEANGAVLVYTLPQVPGDFATAFPGATMSEEKRISVPVLRTHTG
KTKDYFYRFVAPKACTG

Sequences:

>Translated_497_residues
MDRVLSRWGFSIGLSALVVAALVLPVVLAALVFPTPLYDTRELVAWGRHFPLLTPVHPPMMVWAGGAVDRLFGPSGTAIV
FVNQICLAIGLGYLYATLRLLVDRAMAAYVLALAAASFYVVFAPLSWALNADILQLMSWPAVLYHFLRGRSTDRWLHWIL
LGIWAAIAALTKYNAAVLFLAMAAGIVAVPSVRACLRRPGPYVAVLVGALLFLPHAIAAWRYGTTIAYGERHFTGFGSVA
DTARRLGLLVAGYLPLLLPGAIVLAIAVGRRMIAWRVPRFAEASDELKFIVIVNVAMFAVLVVLIAGCGLEYIARYGAPF
AELAVLALAPLFTWNESRRAVAVRQTVQSLGVLYAVLAAGASVVYLLFASHSGLQEPTAQAARVILADWNSKYKCGPGYY
LGDRQTVYGIGIAAGPDGDSMTINFIPKARWFDTAKLEANGAVLVYTLPQVPGDFATAFPGATMSEEKRISVPVLRTHTG
KTKDYFYRFVAPKACTG
>Mature_497_residues
MDRVLSRWGFSIGLSALVVAALVLPVVLAALVFPTPLYDTRELVAWGRHFPLLTPVHPPMMVWAGGAVDRLFGPSGTAIV
FVNQICLAIGLGYLYATLRLLVDRAMAAYVLALAAASFYVVFAPLSWALNADILQLMSWPAVLYHFLRGRSTDRWLHWIL
LGIWAAIAALTKYNAAVLFLAMAAGIVAVPSVRACLRRPGPYVAVLVGALLFLPHAIAAWRYGTTIAYGERHFTGFGSVA
DTARRLGLLVAGYLPLLLPGAIVLAIAVGRRMIAWRVPRFAEASDELKFIVIVNVAMFAVLVVLIAGCGLEYIARYGAPF
AELAVLALAPLFTWNESRRAVAVRQTVQSLGVLYAVLAAGASVVYLLFASHSGLQEPTAQAARVILADWNSKYKCGPGYY
LGDRQTVYGIGIAAGPDGDSMTINFIPKARWFDTAKLEANGAVLVYTLPQVPGDFATAFPGATMSEEKRISVPVLRTHTG
KTKDYFYRFVAPKACTG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53705; Mature: 53705

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRVLSRWGFSIGLSALVVAALVLPVVLAALVFPTPLYDTRELVAWGRHFPLLTPVHPPM
CCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCC
MVWAGGAVDRLFGPSGTAIVFVNQICLAIGLGYLYATLRLLVDRAMAAYVLALAAASFYV
EEEECCCHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VFAPLSWALNADILQLMSWPAVLYHFLRGRSTDRWLHWILLGIWAAIAALTKYNAAVLFL
HEEHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMAAGIVAVPSVRACLRRPGPYVAVLVGALLFLPHAIAAWRYGTTIAYGERHFTGFGSVA
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHH
DTARRLGLLVAGYLPLLLPGAIVLAIAVGRRMIAWRVPRFAEASDELKFIVIVNVAMFAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHHHH
LVVLIAGCGLEYIARYGAPFAELAVLALAPLFTWNESRRAVAVRQTVQSLGVLYAVLAAG
HHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCC
ASVVYLLFASHSGLQEPTAQAARVILADWNSKYKCGPGYYLGDRQTVYGIGIAAGPDGDS
HHHHHHHHHCCCCCCCHHHHHHEEEEECCCCCCCCCCCEEECCCCEEEEEEEEECCCCCC
MTINFIPKARWFDTAKLEANGAVLVYTLPQVPGDFATAFPGATMSEEKRISVPVLRTHTG
EEEEEECCCCCCCCEEEECCCEEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCEEECCCC
KTKDYFYRFVAPKACTG
CCHHHHHHEECCCCCCC
>Mature Secondary Structure
MDRVLSRWGFSIGLSALVVAALVLPVVLAALVFPTPLYDTRELVAWGRHFPLLTPVHPPM
CCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCC
MVWAGGAVDRLFGPSGTAIVFVNQICLAIGLGYLYATLRLLVDRAMAAYVLALAAASFYV
EEEECCCHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VFAPLSWALNADILQLMSWPAVLYHFLRGRSTDRWLHWILLGIWAAIAALTKYNAAVLFL
HEEHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMAAGIVAVPSVRACLRRPGPYVAVLVGALLFLPHAIAAWRYGTTIAYGERHFTGFGSVA
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHH
DTARRLGLLVAGYLPLLLPGAIVLAIAVGRRMIAWRVPRFAEASDELKFIVIVNVAMFAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHHHH
LVVLIAGCGLEYIARYGAPFAELAVLALAPLFTWNESRRAVAVRQTVQSLGVLYAVLAAG
HHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCC
ASVVYLLFASHSGLQEPTAQAARVILADWNSKYKCGPGYYLGDRQTVYGIGIAAGPDGDS
HHHHHHHHHCCCCCCCHHHHHHEEEEECCCCCCCCCCCEEECCCCEEEEEEEEECCCCCC
MTINFIPKARWFDTAKLEANGAVLVYTLPQVPGDFATAFPGATMSEEKRISVPVLRTHTG
EEEEEECCCCCCCCEEEECCCEEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCEEECCCC
KTKDYFYRFVAPKACTG
CCHHHHHHEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA