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The map label for this gene is flgC [H]

Identifier: 86750885

GI number: 86750885

Start: 4310897

End: 4311322

Strand: Reverse

Name: flgC [H]

Synonym: RPB_3776

Alternate gene names: 86750885

Gene position: 4311322-4310897 (Counterclockwise)

Preceding gene: 86750886

Following gene: 86750884

Centisome position: 80.86

GC content: 64.32

Gene sequence:

>426_bases
ATGGCAGACGACGCAGGCGATTTTGCAAGGTCGATGGGCATTGCCACCTCCGGGCTGCGTGCCCAGGCCGGGCGGATGCG
AGTGATCTCCGAAAATATCGCCAATGCGGATTCGACCGCGCAGAAGCCGGGCGGTGATCCGTATCGGCGCAAGGTGCCGA
CCTTCACCTCGGCGCTCGACCGCTCGCTCGACGCCCGCACTGTGGCGCTCGGCCGGGTCAAGCCGGACACCTCGGCGTTC
CGGCTGAAATACGAACCGACCAATCCGGCCGCCGACGCCGCCGGCAACGTCAAGTACCCGAACGTCAATTCGATGATCGA
AATGACCGACATGCGCAGCGCGCAGCGGTCCTACGAAGCCAACCTCAACGTCATCAGCGCGACGCGCCGGATGATCCAAC
GCACCCTCGATATCCTCAAGGCCTGA

Upstream 100 bases:

>100_bases
ATGGACTATGCCGCCGCGACCTCGCTCTACACCCGCAGTCTCGGCCTGCTGAAAACCGCAATCGGCAAGCGCTGACCCAC
GCCACCCGGGAGATTGAACC

Downstream 100 bases:

>100_bases
ACCGGGCCCGAGCCGGGAGACCACCCATGGCGTCACCGATTTCCGCAGCCAATGCCTATGCGAGCCTCGCCCGGCTCGCC
AATCCCGGCGGTGCCGGCAA

Product: flagellar basal body rod protein FlgC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 140

Protein sequence:

>141_residues
MADDAGDFARSMGIATSGLRAQAGRMRVISENIANADSTAQKPGGDPYRRKVPTFTSALDRSLDARTVALGRVKPDTSAF
RLKYEPTNPAADAAGNVKYPNVNSMIEMTDMRSAQRSYEANLNVISATRRMIQRTLDILKA

Sequences:

>Translated_141_residues
MADDAGDFARSMGIATSGLRAQAGRMRVISENIANADSTAQKPGGDPYRRKVPTFTSALDRSLDARTVALGRVKPDTSAF
RLKYEPTNPAADAAGNVKYPNVNSMIEMTDMRSAQRSYEANLNVISATRRMIQRTLDILKA
>Mature_140_residues
ADDAGDFARSMGIATSGLRAQAGRMRVISENIANADSTAQKPGGDPYRRKVPTFTSALDRSLDARTVALGRVKPDTSAFR
LKYEPTNPAADAAGNVKYPNVNSMIEMTDMRSAQRSYEANLNVISATRRMIQRTLDILKA

Specific function: Unknown

COG id: COG1558

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787314, Length=125, Percent_Identity=40.8, Blast_Score=86, Evalue=1e-18,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR006299 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 15340; Mature: 15208

Theoretical pI: Translated: 10.50; Mature: 10.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADDAGDFARSMGIATSGLRAQAGRMRVISENIANADSTAQKPGGDPYRRKVPTFTSALD
CCCCHHHHHHHHCCCCCCCHHCCCCHHHHHHHHCCCCCCCCCCCCCHHHHCCCHHHHHHH
RSLDARTVALGRVKPDTSAFRLKYEPTNPAADAAGNVKYPNVNSMIEMTDMRSAQRSYEA
CCCCCHHEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC
NLNVISATRRMIQRTLDILKA
CCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ADDAGDFARSMGIATSGLRAQAGRMRVISENIANADSTAQKPGGDPYRRKVPTFTSALD
CCCHHHHHHHHCCCCCCCHHCCCCHHHHHHHHCCCCCCCCCCCCCHHHHCCCHHHHHHH
RSLDARTVALGRVKPDTSAFRLKYEPTNPAADAAGNVKYPNVNSMIEMTDMRSAQRSYEA
CCCCCHHEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC
NLNVISATRRMIQRTLDILKA
CCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9858749; 11481430 [H]