| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is flgB [C]
Identifier: 86750886
GI number: 86750886
Start: 4311348
End: 4311785
Strand: Reverse
Name: flgB [C]
Synonym: RPB_3777
Alternate gene names: 86750886
Gene position: 4311785-4311348 (Counterclockwise)
Preceding gene: 86750889
Following gene: 86750885
Centisome position: 80.87
GC content: 65.53
Gene sequence:
>438_bases GTGGTGGCGACCGGGACGGAGGCGGCGATGGCGATCAATGATCTTCCGATGCTGGCGGCGCTGCGCACCAAGATGCAATG GCATCAGGAGCGCCAGAAAGTGCTGGCCGAGAACGTCTCGAACTCGGACACGCCGGGGTTCCAGCCGCGCGATCTGGTCG CGCCGAAATTCAATTCGGCCGGCCAGCTGACCGCCAGTTCCGCCGGCGGCGCGCTGCCGATGATGATGACGAGCGCGTCG CACATGAAAGCGCCCGGCGGCGCGGTTTCGTTTGCGGAGGATCGCCGCGCCGGATTCCAGACCCGTCCGGCCGGAAACGC CGTCAATCTCGAGGACCAGATGATGAAGGTCTCGGCCAACCAGATGGACTATGCCGCCGCGACCTCGCTCTACACCCGCA GTCTCGGCCTGCTGAAAACCGCAATCGGCAAGCGCTGA
Upstream 100 bases:
>100_bases AGACATTCGTAACGAAATCGCAAGCCTTTCGTAACCAATCTTAACCGGCCGTTAACCATACCCCCGGCAAATTCTGCCTA CTCCCCGGCGGAGTCGCAAA
Downstream 100 bases:
>100_bases CCCACGCCACCCGGGAGATTGAACCATGGCAGACGACGCAGGCGATTTTGCAAGGTCGATGGGCATTGCCACCTCCGGGC TGCGTGCCCAGGCCGGGCGG
Product: flagellar basal body rod protein FlgB
Products: NA
Alternate protein names: Flagellar Basal-Body Rod Protein FlgB; Flagellar Basal Body Rod Protein; Flagellar Basal-Body Rod Protein; Flagellar Basal-Body Rod Protein Flgb; Flagellar Basal Body Protein
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MVATGTEAAMAINDLPMLAALRTKMQWHQERQKVLAENVSNSDTPGFQPRDLVAPKFNSAGQLTASSAGGALPMMMTSAS HMKAPGGAVSFAEDRRAGFQTRPAGNAVNLEDQMMKVSANQMDYAAATSLYTRSLGLLKTAIGKR
Sequences:
>Translated_145_residues MVATGTEAAMAINDLPMLAALRTKMQWHQERQKVLAENVSNSDTPGFQPRDLVAPKFNSAGQLTASSAGGALPMMMTSAS HMKAPGGAVSFAEDRRAGFQTRPAGNAVNLEDQMMKVSANQMDYAAATSLYTRSLGLLKTAIGKR >Mature_145_residues MVATGTEAAMAINDLPMLAALRTKMQWHQERQKVLAENVSNSDTPGFQPRDLVAPKFNSAGQLTASSAGGALPMMMTSAS HMKAPGGAVSFAEDRRAGFQTRPAGNAVNLEDQMMKVSANQMDYAAATSLYTRSLGLLKTAIGKR
Specific function: Unknown
COG id: COG1815
COG function: function code N; Flagellar basal body protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15404; Mature: 15404
Theoretical pI: Translated: 10.31; Mature: 10.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 7.6 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 7.6 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVATGTEAAMAINDLPMLAALRTKMQWHQERQKVLAENVSNSDTPGFQPRDLVAPKFNSA CCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC GQLTASSAGGALPMMMTSASHMKAPGGAVSFAEDRRAGFQTRPAGNAVNLEDQMMKVSAN CCEEECCCCCCCHHHHHCHHHHCCCCCCCCCHHHHHCCCCCCCCCCEECHHHHHHHHHCC QMDYAAATSLYTRSLGLLKTAIGKR HHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MVATGTEAAMAINDLPMLAALRTKMQWHQERQKVLAENVSNSDTPGFQPRDLVAPKFNSA CCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC GQLTASSAGGALPMMMTSASHMKAPGGAVSFAEDRRAGFQTRPAGNAVNLEDQMMKVSAN CCEEECCCCCCCHHHHHCHHHHCCCCCCCCCHHHHHCCCCCCCCCCEECHHHHHHHHHCC QMDYAAATSLYTRSLGLLKTAIGKR HHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA