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The map label for this gene is 86750508

Identifier: 86750508

GI number: 86750508

Start: 3882765

End: 3883298

Strand: Direct

Name: 86750508

Synonym: RPB_3397

Alternate gene names: NA

Gene position: 3882765-3883298 (Clockwise)

Preceding gene: 86750507

Following gene: 86750509

Centisome position: 72.82

GC content: 69.48

Gene sequence:

>534_bases
GTGAGCCGGATCCTGCTGGTGCTCGCGGTGCTGATCGGGACCGCCGGCGCGGTGGTCGCCTATGGCGACCCCAAGCGCAT
CTCGGAAGCCGGCGATGCGATGTCGACGATGCTGAAGAAGCGCGTCGCGGCGGCGACCGCAGCGGCCGCCGGACATGGCC
GCGTCGTCCAGATCCCGCGCGGCACCGGCGGCGAATTCGCGGTGCGCGCCAAGGTCAACGGCGTCAACGCGGCGATGGTG
ATCGACACCGGCGCGACCTCGGTCGTGCTGACTTATGAGACCGCAAAGGCCGCCGGGCTGCCGCTCGAACTGCTGAATTT
CGACGTCGAGGTCGAGACCGCGGGCGGGCGCACCCGCGCCGCCAAGCTGTCGCTCGACAGCATCGCGATCGGCAAGCTGG
TGGAGCGCTCGGTGCCGGCGCTGGTGGTGCCGCGCGGCCAGATGAAGAGCAATCTGCTCGGCATGAGCTTCCTCGACCGG
CTGGAAAGCTGGGAAGTCCGCGCCGACCAGTTGCGGCTGCACGGTTATCCCTGA

Upstream 100 bases:

>100_bases
GAGCGGCGCGCCATCATGGCGGCGTTGCCGGAACGGATGGCCGAGGCCGGCCTGGAGCCGCCCAAGCCTCGCACGGATTG
CACCAGCTAGCAGGTGTCCC

Downstream 100 bases:

>100_bases
GCCGGTCGGAGGCCGCCGATCGCCGGTGGTCGCCGGTTTGATGGACAGCAATGCGCGTGAACCGAGCCGGCGCATTTGAA
CGGGCGACGGGGCGCGCATG

Product: hypothetical protein

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 177; Mature: 176

Protein sequence:

>177_residues
MSRILLVLAVLIGTAGAVVAYGDPKRISEAGDAMSTMLKKRVAAATAAAAGHGRVVQIPRGTGGEFAVRAKVNGVNAAMV
IDTGATSVVLTYETAKAAGLPLELLNFDVEVETAGGRTRAAKLSLDSIAIGKLVERSVPALVVPRGQMKSNLLGMSFLDR
LESWEVRADQLRLHGYP

Sequences:

>Translated_177_residues
MSRILLVLAVLIGTAGAVVAYGDPKRISEAGDAMSTMLKKRVAAATAAAAGHGRVVQIPRGTGGEFAVRAKVNGVNAAMV
IDTGATSVVLTYETAKAAGLPLELLNFDVEVETAGGRTRAAKLSLDSIAIGKLVERSVPALVVPRGQMKSNLLGMSFLDR
LESWEVRADQLRLHGYP
>Mature_176_residues
SRILLVLAVLIGTAGAVVAYGDPKRISEAGDAMSTMLKKRVAAATAAAAGHGRVVQIPRGTGGEFAVRAKVNGVNAAMVI
DTGATSVVLTYETAKAAGLPLELLNFDVEVETAGGRTRAAKLSLDSIAIGKLVERSVPALVVPRGQMKSNLLGMSFLDRL
ESWEVRADQLRLHGYP

Specific function: Unknown

COG id: COG3577

COG function: function code R; Predicted aspartyl protease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011969
- InterPro:   IPR021109
- InterPro:   IPR001969 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18510; Mature: 18379

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: PS00141 ASP_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRILLVLAVLIGTAGAVVAYGDPKRISEAGDAMSTMLKKRVAAATAAAAGHGRVVQIPR
CHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC
GTGGEFAVRAKVNGVNAAMVIDTGATSVVLTYETAKAAGLPLELLNFDVEVETAGGRTRA
CCCCCEEEEEEECCCEEEEEEECCCCEEEEEEECCCCCCCCHHHEEEEEEEECCCCCEEE
AKLSLDSIAIGKLVERSVPALVVPRGQMKSNLLGMSFLDRLESWEVRADQLRLHGYP
EEEEHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCC
>Mature Secondary Structure 
SRILLVLAVLIGTAGAVVAYGDPKRISEAGDAMSTMLKKRVAAATAAAAGHGRVVQIPR
HHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC
GTGGEFAVRAKVNGVNAAMVIDTGATSVVLTYETAKAAGLPLELLNFDVEVETAGGRTRA
CCCCCEEEEEEECCCEEEEEEECCCCEEEEEEECCCCCCCCHHHEEEEEEEECCCCCEEE
AKLSLDSIAIGKLVERSVPALVVPRGQMKSNLLGMSFLDRLESWEVRADQLRLHGYP
EEEEHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1917841 [H]