| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
Click here to switch to the map view.
The map label for this gene is cyaB [H]
Identifier: 86750509
GI number: 86750509
Start: 3883455
End: 3885443
Strand: Direct
Name: cyaB [H]
Synonym: RPB_3398
Alternate gene names: 86750509
Gene position: 3883455-3885443 (Clockwise)
Preceding gene: 86750508
Following gene: 86750512
Centisome position: 72.84
GC content: 66.42
Gene sequence:
>1989_bases ATGAAGTTCACCACCCGATTGATCCTGCTCGTCACCGTGCTGACGGTCGGCGCGACGCTCGTCACCGCCGCGCTGCTCAC CTGGACGACGCGCCGGGCCATCATCACCGAGGCGGAAGCCTCGGGCGAGATGGTCGCGCGGCTGCTGGCGCGCAGCGCCA GCCTCGCCAGCTCGATTCCGGCCGAGGTGGAATCGATGATCGCCGACGAGATGGTGGCGCAAGGCAACATTCTGGCGCAT TTCGTCGAGGCGGCGGAGCGCGCCGGCCTCGCGCCCGACGCGATCAATCGCCGGCTGAGGAGCATCACCGACGCGACCGT GTTGGACGAAATCTGGATCACCGACGACAAGGGCCATGCTTATCTGCACAGCATGCCGGGGATCGACTTCACCTTCAGCT CCTCGCCGCAGGTGCAGCCGCAAGCCTACGCGTTCTACGATCTGTTGACCGGCAAGCGGAAGGTGGTCGATCAGGAGGCG CGCAAGCGCGACATCGACAATCAGCATTTCAAATATGTCGGCGTCGGCGGCATCGACAAGCCGAGGATCATTCAGGTCGG GCGTAGCGCGAAACTGCTCGAGATGCTGACCGCGAAGGTCGGGCTGCCGCGGGCGGTGGAGAACCTGCTGGCAGACGGCG ACATCGACGCGGTGTGGGTGTTCGACCGCAAGCTCGACGCGATCGTCGGCCCCGGCGTCTACGGCGTCGAGCGCCACGAC GGTCCCAACAAACAAGAGCTGGGGCCGGTCGGCCTGGTGATTGCCGACGGCCAGACCCGGCACGTCGAGAGCCGGGAGAA CCTGAGCGTCATCGCGCCGGTTCACAACGACAAGAAGGAGATCGTCGGCGCCGCCTTGGTCCGCCTGCCGATGAACCGGG TGTGGGCGACAGTGCAGAGCCAGGCGGAGATCGCCGCGGCGACGGCATCCGCGATCGCGCTACTCGGCATTCTGCTGTCG ATCGGCGTCGCACGCCACCAGTCCGCGCCGCTGCGTCAGATCACCCGCGCCGCGTCGGCGCTGGAATCCCAGACCTTCGA GCCCGCGATGCTCGCGGCCGCCGCCGATCGCGGCGACGAACTCGGACAGTTGGCGCGGGTGTTCACCGGGATGGCCGGTC AGGTCGCGGCCCGCGAGGAGCATCTCGATTCGATGGTGAGGCAGCGGACCGCCGAACTCGAAGCCCGCACCCGCAGCCTC GAAGGCCTGTCGGCGGCGCTGTCGAAATATCTGTCGCCGCAGGTGTACTCCTCGATCTTCAGCGGCCATCAGGTCGCCGA GATCGCCTCGAAGCGCAAGAAACTGACGATCTTCCTGTCGGACATCGCCGACTTCACCGCCACCACCGACAAGCTCGAAT CCGAAGACCTGACGGCGATGCTCAACCGCTATCTCGCCGAGATGGCGCAGATCGCGCTGAAGCACGGCGCCACCATCGAC AAATATGTCGGCGACGCCGTGCTCGCCTTCTTCGGCGATCCGCAGAGCCGCGGCGTCAAGGAGGACGCCGTCGCCTGCGT GATGATGGCGATCGAGATGCAGACCAAGCTCAAGCAACTGGAGACGGAGTGGACGGCCGCGGGCGCGCAGCGGCCGTTCC GGGTGCGGATCGGCATCAACACCGGCTATTGCACCGTCGGCAATTTCGGCAGCCCCGACCGGATGGACTACACCATCATC GGCGGCGAGGTGAATCTCACCTCGCGGCTCGAACAGGCCTGCGAGCCGGGATCGATCCTGATCTCTCACGTCACCTGGTC GCTGGTGAACGATGTCATCGACGCGGAGGAGCGACCGGCGCTGACCGTGAAGGGCTTCGGCGAGTCGGTCCGTGCCTACG CGGTCCGCGGCCTCAAGGCCGCAACGCCGGCCGAGATCATTCGCAAGGAACTGCCCGGGATGCAGCTGTTCATCGACACC GCCGCCGCCGATCGCACCGAAGTCCGCGAGACCCTCGCCAAGGTGGTGGCGGAGCTCGACGAAGCGTGA
Upstream 100 bases:
>100_bases GTGAACCGAGCCGGCGCATTTGAACGGGCGACGGGGCGCGCATGATCCGAAACCTGGACGACCGAGTTTCGGAGGCGATC ATGCAACAACAGGTTGTTCG
Downstream 100 bases:
>100_bases GGATCACCCTCCCCTGCGAGGGGCGGGACAATCGCATTGAACATTTGCAGTCGCCGCGCGGCTCACCCTCCCCTGGAGGG GGAGGGTCGCTCGCGTCAGC
Product: adenylate/guanylate cyclase
Products: NA
Alternate protein names: ATP pyrophosphate-lyase 2; Adenylyl cyclase 2; AC2 [H]
Number of amino acids: Translated: 662; Mature: 662
Protein sequence:
>662_residues MKFTTRLILLVTVLTVGATLVTAALLTWTTRRAIITEAEASGEMVARLLARSASLASSIPAEVESMIADEMVAQGNILAH FVEAAERAGLAPDAINRRLRSITDATVLDEIWITDDKGHAYLHSMPGIDFTFSSSPQVQPQAYAFYDLLTGKRKVVDQEA RKRDIDNQHFKYVGVGGIDKPRIIQVGRSAKLLEMLTAKVGLPRAVENLLADGDIDAVWVFDRKLDAIVGPGVYGVERHD GPNKQELGPVGLVIADGQTRHVESRENLSVIAPVHNDKKEIVGAALVRLPMNRVWATVQSQAEIAAATASAIALLGILLS IGVARHQSAPLRQITRAASALESQTFEPAMLAAAADRGDELGQLARVFTGMAGQVAAREEHLDSMVRQRTAELEARTRSL EGLSAALSKYLSPQVYSSIFSGHQVAEIASKRKKLTIFLSDIADFTATTDKLESEDLTAMLNRYLAEMAQIALKHGATID KYVGDAVLAFFGDPQSRGVKEDAVACVMMAIEMQTKLKQLETEWTAAGAQRPFRVRIGINTGYCTVGNFGSPDRMDYTII GGEVNLTSRLEQACEPGSILISHVTWSLVNDVIDAEERPALTVKGFGESVRAYAVRGLKAATPAEIIRKELPGMQLFIDT AAADRTEVRETLAKVVAELDEA
Sequences:
>Translated_662_residues MKFTTRLILLVTVLTVGATLVTAALLTWTTRRAIITEAEASGEMVARLLARSASLASSIPAEVESMIADEMVAQGNILAH FVEAAERAGLAPDAINRRLRSITDATVLDEIWITDDKGHAYLHSMPGIDFTFSSSPQVQPQAYAFYDLLTGKRKVVDQEA RKRDIDNQHFKYVGVGGIDKPRIIQVGRSAKLLEMLTAKVGLPRAVENLLADGDIDAVWVFDRKLDAIVGPGVYGVERHD GPNKQELGPVGLVIADGQTRHVESRENLSVIAPVHNDKKEIVGAALVRLPMNRVWATVQSQAEIAAATASAIALLGILLS IGVARHQSAPLRQITRAASALESQTFEPAMLAAAADRGDELGQLARVFTGMAGQVAAREEHLDSMVRQRTAELEARTRSL EGLSAALSKYLSPQVYSSIFSGHQVAEIASKRKKLTIFLSDIADFTATTDKLESEDLTAMLNRYLAEMAQIALKHGATID KYVGDAVLAFFGDPQSRGVKEDAVACVMMAIEMQTKLKQLETEWTAAGAQRPFRVRIGINTGYCTVGNFGSPDRMDYTII GGEVNLTSRLEQACEPGSILISHVTWSLVNDVIDAEERPALTVKGFGESVRAYAVRGLKAATPAEIIRKELPGMQLFIDT AAADRTEVRETLAKVVAELDEA >Mature_662_residues MKFTTRLILLVTVLTVGATLVTAALLTWTTRRAIITEAEASGEMVARLLARSASLASSIPAEVESMIADEMVAQGNILAH FVEAAERAGLAPDAINRRLRSITDATVLDEIWITDDKGHAYLHSMPGIDFTFSSSPQVQPQAYAFYDLLTGKRKVVDQEA RKRDIDNQHFKYVGVGGIDKPRIIQVGRSAKLLEMLTAKVGLPRAVENLLADGDIDAVWVFDRKLDAIVGPGVYGVERHD GPNKQELGPVGLVIADGQTRHVESRENLSVIAPVHNDKKEIVGAALVRLPMNRVWATVQSQAEIAAATASAIALLGILLS IGVARHQSAPLRQITRAASALESQTFEPAMLAAAADRGDELGQLARVFTGMAGQVAAREEHLDSMVRQRTAELEARTRSL EGLSAALSKYLSPQVYSSIFSGHQVAEIASKRKKLTIFLSDIADFTATTDKLESEDLTAMLNRYLAEMAQIALKHGATID KYVGDAVLAFFGDPQSRGVKEDAVACVMMAIEMQTKLKQLETEWTAAGAQRPFRVRIGINTGYCTVGNFGSPDRMDYTII GGEVNLTSRLEQACEPGSILISHVTWSLVNDVIDAEERPALTVKGFGESVRAYAVRGLKAATPAEIIRKELPGMQLFIDT AAADRTEVRETLAKVVAELDEA
Specific function: Unknown
COG id: COG2114
COG function: function code T; Adenylate cyclase, family 3 (some proteins contain HAMP domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Caenorhabditis elegans, GI17534659, Length=256, Percent_Identity=26.171875, Blast_Score=76, Evalue=7e-14, Organism=Caenorhabditis elegans, GI193207841, Length=248, Percent_Identity=27.0161290322581, Blast_Score=65, Evalue=8e-11, Organism=Drosophila melanogaster, GI24585694, Length=167, Percent_Identity=27.5449101796407, Blast_Score=71, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001054 - InterPro: IPR011006 - InterPro: IPR001789 [H]
Pfam domain/function: PF00211 Guanylate_cyc; PF00072 Response_reg [H]
EC number: =4.6.1.1 [H]
Molecular weight: Translated: 71722; Mature: 71722
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: PS50885 HAMP ; PS50125 GUANYLATE_CYCLASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFTTRLILLVTVLTVGATLVTAALLTWTTRRAIITEAEASGEMVARLLARSASLASSIP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHCCH AEVESMIADEMVAQGNILAHFVEAAERAGLAPDAINRRLRSITDATVLDEIWITDDKGHA HHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCE YLHSMPGIDFTFSSSPQVQPQAYAFYDLLTGKRKVVDQEARKRDIDNQHFKYVGVGGIDK EEECCCCCCEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEECCCCCC PRIIQVGRSAKLLEMLTAKVGLPRAVENLLADGDIDAVWVFDRKLDAIVGPGVYGVERHD CCEEECCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEECCHHHHHCCCCCCCCCCCC GPNKQELGPVGLVIADGQTRHVESRENLSVIAPVHNDKKEIVGAALVRLPMNRVWATVQS CCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH QAEIAAATASAIALLGILLSIGVARHQSAPLRQITRAASALESQTFEPAMLAAAADRGDE HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHH LGQLARVFTGMAGQVAAREEHLDSMVRQRTAELEARTRSLEGLSAALSKYLSPQVYSSIF HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH SGHQVAEIASKRKKLTIFLSDIADFTATTDKLESEDLTAMLNRYLAEMAQIALKHGATID CCCHHHHHHHCCCEEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHH KYVGDAVLAFFGDPQSRGVKEDAVACVMMAIEMQTKLKQLETEWTAAGAQRPFRVRIGIN HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC TGYCTVGNFGSPDRMDYTIIGGEVNLTSRLEQACEPGSILISHVTWSLVNDVIDAEERPA CCEEECCCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCEEHHHHHHHHHHHHHCCCCCCE LTVKGFGESVRAYAVRGLKAATPAEIIRKELPGMQLFIDTAAADRTEVRETLAKVVAELD EEEECCCHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHC EA CC >Mature Secondary Structure MKFTTRLILLVTVLTVGATLVTAALLTWTTRRAIITEAEASGEMVARLLARSASLASSIP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHCCH AEVESMIADEMVAQGNILAHFVEAAERAGLAPDAINRRLRSITDATVLDEIWITDDKGHA HHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCE YLHSMPGIDFTFSSSPQVQPQAYAFYDLLTGKRKVVDQEARKRDIDNQHFKYVGVGGIDK EEECCCCCCEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEECCCCCC PRIIQVGRSAKLLEMLTAKVGLPRAVENLLADGDIDAVWVFDRKLDAIVGPGVYGVERHD CCEEECCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEECCHHHHHCCCCCCCCCCCC GPNKQELGPVGLVIADGQTRHVESRENLSVIAPVHNDKKEIVGAALVRLPMNRVWATVQS CCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH QAEIAAATASAIALLGILLSIGVARHQSAPLRQITRAASALESQTFEPAMLAAAADRGDE HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHH LGQLARVFTGMAGQVAAREEHLDSMVRQRTAELEARTRSLEGLSAALSKYLSPQVYSSIF HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH SGHQVAEIASKRKKLTIFLSDIADFTATTDKLESEDLTAMLNRYLAEMAQIALKHGATID CCCHHHHHHHCCCEEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHH KYVGDAVLAFFGDPQSRGVKEDAVACVMMAIEMQTKLKQLETEWTAAGAQRPFRVRIGIN HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC TGYCTVGNFGSPDRMDYTIIGGEVNLTSRLEQACEPGSILISHVTWSLVNDVIDAEERPA CCEEECCCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCEEHHHHHHHHHHHHHCCCCCCE LTVKGFGESVRAYAVRGLKAATPAEIIRKELPGMQLFIDTAAADRTEVRETLAKVVAELD EEEECCCHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHC EA CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9523018; 8418825 [H]