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The map label for this gene is 86750481

Identifier: 86750481

GI number: 86750481

Start: 3853080

End: 3855155

Strand: Direct

Name: 86750481

Synonym: RPB_3370

Alternate gene names: NA

Gene position: 3853080-3855155 (Clockwise)

Preceding gene: 86750480

Following gene: 86750486

Centisome position: 72.27

GC content: 66.81

Gene sequence:

>2076_bases
ATGACGTCGAACAAGCGCAGCCTCGGCAAACGCCTCGGTCTGATCGCGGCCTTTGCTGTCGTCGCGATCGGCGGCGCCGC
GGCCTGGATCGTGCAACCGCCGCCGATCGAGCGCAACGACCCGGGTTTCGGCGCCAATGTCGATCCCGCGCTGATCGCGC
GCGGTGAATATGTCGCGCGGCTGGGCGACTGCGTCGCCTGCCACACCGCCGAGGGCGGACCTCTGATGGCTGGCGGCCGG
GCGCTCGAGACGCCGTTCGGCAAGGTGTACTCGACCAATGTGACGCCCGATCCGAAAACCGGCATCGGGCAATGGTCGTT
CGGCGCGTTCGATCGCGCGATGCGCAAGGGCGTCTCGGCGGACGGTCACAATCTCTATCCGGCGATGCCCTACCCGTCTT
ACGCCAAGATGACGGACGACGACATGAAGGCGCTGTGGGCCTATCTCCTCAAGGGCCTCGCGCCGGTCGAGAAGGCCAAT
CTCCCGCTCGAGATGCAGTTTCCGTTCAACATGCGCATCGCGCTCGCCGCCTGGAATTTCGCCTTCCTGGATGCGACGCC
GTTCAAGGCCGAGCCTGCGAAGGATGCTGTGTGGAATCGCGGCGCGTATCTCGTCCAGGGTCTCGGCCATTGCGGCGCCT
GTCACACGCCGCGCGGCATCGGTTTCCAGGAAAAGGCGATGAGCGACGCCGGACCGGCGGGCCATTTCTATCTCGCCGGC
GCCAAGGTCGAAAACTGGAATGCGATCGAGCTACGCGATTTGTGGACCGTCGAGGACACCGTCCTGTTGCTGAAGACCGG
CCAGAACCGCTTCGCCACCGCGTCCGGCAGCATGACCGATGTCATCCTGCATTCGACGCAGGGACTCTCCGACCAGGACC
TGACGGCGATCGCGACCTATCTCAAGGCGCTGCCGTCCGACCGGCCGAAGGCCGAGCCACGGATCGCATCGACCGAGGCG
CCTGCGGCCACCTTCACCACCCGCGGCGGGCTCGGCTACGCACAGTTCTGCACCGACTGTCACCGGGCCGACGGCGCCGG
CGTGAAGGGCATCTTCCCGCCGCTCGCGGGCAATCCCACCGTCACTTCGAAAGACCCGGCGACGCTGGTGCATATCGCGC
TGACCGGCTGGAAGACCACCGCGACCGCCGCCCATCCGAGGGTCTGGACGATGCCGGCCTTCGCCCGCCTCGCCGATCGC
GAGATCGCCGAGATCCTGTCCTTCGTGCGCGAGAGCTGGGGCGAAGGCGCCCGCGCCGTCAGCGAGGCCGAGGTCGCCGC
GGCGCGTGCCGCGCTCGATCCGAAGATCGACAAGTCGCTGTTCGAGACGCCACGTCTCGCCGATCTGCTGGCGCAGCCCA
ACGCGCCGCAACTGGTCCGCGGCATGCGGCTCAACGCCGAAACCCGCACGCTGTTGCCGAACCATGTCGGCGATGAACTC
AACTGCGCCTCGTGCCATCTCAACGCCGGAACGGTCGCGGACGGCAGCCCCTATGTCGGCGTCTCCGCGTTCTTCCCCAG
TTACGCGCCGCGCGCCGGTCGCGAGATCACGCTGGAGGACCGCATCAACGGCTGCTTCCTGCGCTCGATGAACGGCAAGC
CGCTGCCGGTCGACGGCCCCGACATGCAGGCGATGGTCGCCTATTTCAACTGGATGAAAGGCGCGACCAAGCCGTCCGAC
AAAGTGGCCGGACGCGGCGTCGGCAAGGTCGACACGACGTTGAAGCCCGATCCGGACAACGGCAAGGCGATCTACGTGGC
GCAATGCGTGGCCTGCCACGGCCAGAACGGCGAAGGCCTGAAAGACGCAGCCGGCCGGCTGGTCTATCCCCCGCTGTGGG
GCGAGCACTCGTTCAACATCGGCGCCGGCATGGCGCGCACCTACACCGCCGCCGCCTTCGTCAAGCGCAACATGCCGATC
GGCACCCACGAAAAATTCCCGCTGGGACAAGGCAGTCTGACCGATCAGGAGGCGATCGACGTCGCGGAGTACTTCACCCA
CATGGAGCGGCCGGACTTCGCTCCAAAGGTCAAGGACTGGCCGAAGGGCAACAAGCCGAAGGACGCCCGCTACTGA

Upstream 100 bases:

>100_bases
CCGGAATCGGGATCGGATATAGGGGATTGTCCCGAGTTGTTCCGTTCCGCCGCGGTGCCTAGCCTCGCGCCGAAAAAAGA
ACATCTGAATCGAGCATCTC

Downstream 100 bases:

>100_bases
GCTGTCCGAATCGCGGATCGCTCGGGTCTGACAGGAGCCCGGCGCGGCTCCTGCTCACACCGGGGCTTTCGACTTCACAA
GCTTGTAGACCACCGAATCC

Product: cytochrome c, class I

Products: NA

Alternate protein names: GA 2-DH cytochrome c subunit; GADH cytochrome c subunit [H]

Number of amino acids: Translated: 691; Mature: 690

Protein sequence:

>691_residues
MTSNKRSLGKRLGLIAAFAVVAIGGAAAWIVQPPPIERNDPGFGANVDPALIARGEYVARLGDCVACHTAEGGPLMAGGR
ALETPFGKVYSTNVTPDPKTGIGQWSFGAFDRAMRKGVSADGHNLYPAMPYPSYAKMTDDDMKALWAYLLKGLAPVEKAN
LPLEMQFPFNMRIALAAWNFAFLDATPFKAEPAKDAVWNRGAYLVQGLGHCGACHTPRGIGFQEKAMSDAGPAGHFYLAG
AKVENWNAIELRDLWTVEDTVLLLKTGQNRFATASGSMTDVILHSTQGLSDQDLTAIATYLKALPSDRPKAEPRIASTEA
PAATFTTRGGLGYAQFCTDCHRADGAGVKGIFPPLAGNPTVTSKDPATLVHIALTGWKTTATAAHPRVWTMPAFARLADR
EIAEILSFVRESWGEGARAVSEAEVAAARAALDPKIDKSLFETPRLADLLAQPNAPQLVRGMRLNAETRTLLPNHVGDEL
NCASCHLNAGTVADGSPYVGVSAFFPSYAPRAGREITLEDRINGCFLRSMNGKPLPVDGPDMQAMVAYFNWMKGATKPSD
KVAGRGVGKVDTTLKPDPDNGKAIYVAQCVACHGQNGEGLKDAAGRLVYPPLWGEHSFNIGAGMARTYTAAAFVKRNMPI
GTHEKFPLGQGSLTDQEAIDVAEYFTHMERPDFAPKVKDWPKGNKPKDARY

Sequences:

>Translated_691_residues
MTSNKRSLGKRLGLIAAFAVVAIGGAAAWIVQPPPIERNDPGFGANVDPALIARGEYVARLGDCVACHTAEGGPLMAGGR
ALETPFGKVYSTNVTPDPKTGIGQWSFGAFDRAMRKGVSADGHNLYPAMPYPSYAKMTDDDMKALWAYLLKGLAPVEKAN
LPLEMQFPFNMRIALAAWNFAFLDATPFKAEPAKDAVWNRGAYLVQGLGHCGACHTPRGIGFQEKAMSDAGPAGHFYLAG
AKVENWNAIELRDLWTVEDTVLLLKTGQNRFATASGSMTDVILHSTQGLSDQDLTAIATYLKALPSDRPKAEPRIASTEA
PAATFTTRGGLGYAQFCTDCHRADGAGVKGIFPPLAGNPTVTSKDPATLVHIALTGWKTTATAAHPRVWTMPAFARLADR
EIAEILSFVRESWGEGARAVSEAEVAAARAALDPKIDKSLFETPRLADLLAQPNAPQLVRGMRLNAETRTLLPNHVGDEL
NCASCHLNAGTVADGSPYVGVSAFFPSYAPRAGREITLEDRINGCFLRSMNGKPLPVDGPDMQAMVAYFNWMKGATKPSD
KVAGRGVGKVDTTLKPDPDNGKAIYVAQCVACHGQNGEGLKDAAGRLVYPPLWGEHSFNIGAGMARTYTAAAFVKRNMPI
GTHEKFPLGQGSLTDQEAIDVAEYFTHMERPDFAPKVKDWPKGNKPKDARY
>Mature_690_residues
TSNKRSLGKRLGLIAAFAVVAIGGAAAWIVQPPPIERNDPGFGANVDPALIARGEYVARLGDCVACHTAEGGPLMAGGRA
LETPFGKVYSTNVTPDPKTGIGQWSFGAFDRAMRKGVSADGHNLYPAMPYPSYAKMTDDDMKALWAYLLKGLAPVEKANL
PLEMQFPFNMRIALAAWNFAFLDATPFKAEPAKDAVWNRGAYLVQGLGHCGACHTPRGIGFQEKAMSDAGPAGHFYLAGA
KVENWNAIELRDLWTVEDTVLLLKTGQNRFATASGSMTDVILHSTQGLSDQDLTAIATYLKALPSDRPKAEPRIASTEAP
AATFTTRGGLGYAQFCTDCHRADGAGVKGIFPPLAGNPTVTSKDPATLVHIALTGWKTTATAAHPRVWTMPAFARLADRE
IAEILSFVRESWGEGARAVSEAEVAAARAALDPKIDKSLFETPRLADLLAQPNAPQLVRGMRLNAETRTLLPNHVGDELN
CASCHLNAGTVADGSPYVGVSAFFPSYAPRAGREITLEDRINGCFLRSMNGKPLPVDGPDMQAMVAYFNWMKGATKPSDK
VAGRGVGKVDTTLKPDPDNGKAIYVAQCVACHGQNGEGLKDAAGRLVYPPLWGEHSFNIGAGMARTYTAAAFVKRNMPIG
THEKFPLGQGSLTDQEAIDVAEYFTHMERPDFAPKVKDWPKGNKPKDARY

Specific function: Part of the heterotrimer that catalyzes the conversion of D-gluconate to 2-dehydro-D-gluconate [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 cytochrome c domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR008168
- InterPro:   IPR014353 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: =1.1.99.3 [H]

Molecular weight: Translated: 74128; Mature: 73997

Theoretical pI: Translated: 8.06; Mature: 8.06

Prosite motif: PS51007 CYTC ; PS51008 MULTIHEME_CYTC L=rr

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSNKRSLGKRLGLIAAFAVVAIGGAAAWIVQPPPIERNDPGFGANVDPALIARGEYVAR
CCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCHHHEECCHHHHH
LGDCVACHTAEGGPLMAGGRALETPFGKVYSTNVTPDPKTGIGQWSFGAFDRAMRKGVSA
HCCEEEEECCCCCCEEECCEECCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCC
DGHNLYPAMPYPSYAKMTDDDMKALWAYLLKGLAPVEKANLPLEMQFPFNMRIALAAWNF
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHCCCCEEEECCCCEEEEEEEECE
AFLDATPFKAEPAKDAVWNRGAYLVQGLGHCGACHTPRGIGFQEKAMSDAGPAGHFYLAG
EEECCCCCCCCCCHHHHHCCCHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEEC
AKVENWNAIELRDLWTVEDTVLLLKTGQNRFATASGSMTDVILHSTQGLSDQDLTAIATY
CEECCCCEEEEEEEEEECCEEEEEECCCCCEEECCCCCEEEEEECCCCCCCCHHHHHHHH
LKALPSDRPKAEPRIASTEAPAATFTTRGGLGYAQFCTDCHRADGAGVKGIFPPLAGNPT
HHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC
VTSKDPATLVHIALTGWKTTATAAHPRVWTMPAFARLADREIAEILSFVRESWGEGARAV
CCCCCCCEEEEEEEECCCEECCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
SEAEVAAARAALDPKIDKSLFETPRLADLLAQPNAPQLVRGMRLNAETRTLLPNHVGDEL
HHHHHHHHHHHCCCHHHHHHHCCCHHHHHHCCCCCHHHHHCCCCCCCHHHCCCCCCCCCC
NCASCHLNAGTVADGSPYVGVSAFFPSYAPRAGREITLEDRINGCFLRSMNGKPLPVDGP
CEEEEECCCCCCCCCCCCCCHHHHCCCCCCCCCCEEEEHHCCCEEEEECCCCCCCCCCCC
DMQAMVAYFNWMKGATKPSDKVAGRGVGKVDTTLKPDPDNGKAIYVAQCVACHGQNGEGL
CHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEHHCCCCCCCH
KDAAGRLVYPPLWGEHSFNIGAGMARTYTAAAFVKRNMPIGTHEKFPLGQGSLTDQEAID
HHHCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHH
VAEYFTHMERPDFAPKVKDWPKGNKPKDARY
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TSNKRSLGKRLGLIAAFAVVAIGGAAAWIVQPPPIERNDPGFGANVDPALIARGEYVAR
CCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCHHHEECCHHHHH
LGDCVACHTAEGGPLMAGGRALETPFGKVYSTNVTPDPKTGIGQWSFGAFDRAMRKGVSA
HCCEEEEECCCCCCEEECCEECCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCC
DGHNLYPAMPYPSYAKMTDDDMKALWAYLLKGLAPVEKANLPLEMQFPFNMRIALAAWNF
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHCCCCEEEECCCCEEEEEEEECE
AFLDATPFKAEPAKDAVWNRGAYLVQGLGHCGACHTPRGIGFQEKAMSDAGPAGHFYLAG
EEECCCCCCCCCCHHHHHCCCHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEEC
AKVENWNAIELRDLWTVEDTVLLLKTGQNRFATASGSMTDVILHSTQGLSDQDLTAIATY
CEECCCCEEEEEEEEEECCEEEEEECCCCCEEECCCCCEEEEEECCCCCCCCHHHHHHHH
LKALPSDRPKAEPRIASTEAPAATFTTRGGLGYAQFCTDCHRADGAGVKGIFPPLAGNPT
HHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC
VTSKDPATLVHIALTGWKTTATAAHPRVWTMPAFARLADREIAEILSFVRESWGEGARAV
CCCCCCCEEEEEEEECCCEECCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
SEAEVAAARAALDPKIDKSLFETPRLADLLAQPNAPQLVRGMRLNAETRTLLPNHVGDEL
HHHHHHHHHHHCCCHHHHHHHCCCHHHHHHCCCCCHHHHHCCCCCCCHHHCCCCCCCCCC
NCASCHLNAGTVADGSPYVGVSAFFPSYAPRAGREITLEDRINGCFLRSMNGKPLPVDGP
CEEEEECCCCCCCCCCCCCCHHHHCCCCCCCCCCEEEEHHCCCEEEEECCCCCCCCCCCC
DMQAMVAYFNWMKGATKPSDKVAGRGVGKVDTTLKPDPDNGKAIYVAQCVACHGQNGEGL
CHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEHHCCCCCCCH
KDAAGRLVYPPLWGEHSFNIGAGMARTYTAAAFVKRNMPIGTHEKFPLGQGSLTDQEAID
HHHCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHH
VAEYFTHMERPDFAPKVKDWPKGNKPKDARY
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9352901 [H]