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The map label for this gene is 86750480

Identifier: 86750480

GI number: 86750480

Start: 3852348

End: 3852947

Strand: Direct

Name: 86750480

Synonym: RPB_3369

Alternate gene names: NA

Gene position: 3852348-3852947 (Clockwise)

Preceding gene: 86750470

Following gene: 86750481

Centisome position: 72.25

GC content: 63.67

Gene sequence:

>600_bases
ATGAGCGAAATCAAAACCGTCTGCGTCTATTGCGGCTCCGGATCGGGCACCAATCCGCTTTTCGTCGAGGCGGCACAGGC
CTTCGGCAAGGAACTGGCCGAGAGCGGCGTGACGCTGGTCTATGGCGGCGGCGCGATCGGGCTGATGGGCGCGGTCGCCA
ACGCCGTGCTGGATCATGGCGGCACCGTCACCGGGATCATCCCCGGGTTTCTACGCACCAGAGAGATCGCGCTCAACCGC
GTGCAGGATATGATCGTCACCGACGATATGCACGAACGCAAACGGCTGATGTTCGAACACTCCGACGCCTTCGTGGCGCT
CCCCGGCGGCATCGGCACTCTCGAAGAACTGGTCGAGCAGATGACATGGCAGCAGCTCGGCCGCCACAGAAAGCCGATTC
TGATCGCCAATATCGACGGCTTCTGGGACCCGCTGCTCGGACTGCTGGCCCACATGACGGAAACCGCCTTCATCCGCCCC
CAGTTCTCCGTCAACGTCCTCACCGCCGATTCCGTCAGCGAGATCCTGCCGAAATTGCGCGCCGCCGCGGCACCCGAGCA
GGCCAAGACGATGGCGCCGGAGATCGCGCGCAGACTTTGA

Upstream 100 bases:

>100_bases
ACCCTGGGACGACGATTCTTTGCGTCATAACAGGCTGTTGCGCGGCGCAAGGCAGACGACTGTCTTGACGCTGTAATCCC
GCGATGCCACATCGCTCACC

Downstream 100 bases:

>100_bases
ACTCTGCTCGCCTCGATTAGTGAGTCGCTGATCCGGAATCGGGATCGGATATAGGGGATTGTCCCGAGTTGTTCCGTTCC
GCCGCGGTGCCTAGCCTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 198

Protein sequence:

>199_residues
MSEIKTVCVYCGSGSGTNPLFVEAAQAFGKELAESGVTLVYGGGAIGLMGAVANAVLDHGGTVTGIIPGFLRTREIALNR
VQDMIVTDDMHERKRLMFEHSDAFVALPGGIGTLEELVEQMTWQQLGRHRKPILIANIDGFWDPLLGLLAHMTETAFIRP
QFSVNVLTADSVSEILPKLRAAAAPEQAKTMAPEIARRL

Sequences:

>Translated_199_residues
MSEIKTVCVYCGSGSGTNPLFVEAAQAFGKELAESGVTLVYGGGAIGLMGAVANAVLDHGGTVTGIIPGFLRTREIALNR
VQDMIVTDDMHERKRLMFEHSDAFVALPGGIGTLEELVEQMTWQQLGRHRKPILIANIDGFWDPLLGLLAHMTETAFIRP
QFSVNVLTADSVSEILPKLRAAAAPEQAKTMAPEIARRL
>Mature_198_residues
SEIKTVCVYCGSGSGTNPLFVEAAQAFGKELAESGVTLVYGGGAIGLMGAVANAVLDHGGTVTGIIPGFLRTREIALNRV
QDMIVTDDMHERKRLMFEHSDAFVALPGGIGTLEELVEQMTWQQLGRHRKPILIANIDGFWDPLLGLLAHMTETAFIRPQ
FSVNVLTADSVSEILPKLRAAAAPEQAKTMAPEIARRL

Specific function: Unknown

COG id: COG1611

COG function: function code R; Predicted Rossmann fold nucleotide-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LOG family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6322406, Length=208, Percent_Identity=39.4230769230769, Blast_Score=148, Evalue=4e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005269 [H]

Pfam domain/function: PF03641 Lysine_decarbox [H]

EC number: NA

Molecular weight: Translated: 21443; Mature: 21312

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEIKTVCVYCGSGSGTNPLFVEAAQAFGKELAESGVTLVYGGGAIGLMGAVANAVLDHG
CCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHCC
GTVTGIIPGFLRTREIALNRVQDMIVTDDMHERKRLMFEHSDAFVALPGGIGTLEELVEQ
CEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEECCCCCCHHHHHHHH
MTWQQLGRHRKPILIANIDGFWDPLLGLLAHMTETAFIRPQFSVNVLTADSVSEILPKLR
HHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHEECCCCEEEEEEHHHHHHHHHHHH
AAAAPEQAKTMAPEIARRL
HHCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
SEIKTVCVYCGSGSGTNPLFVEAAQAFGKELAESGVTLVYGGGAIGLMGAVANAVLDHG
CCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHCC
GTVTGIIPGFLRTREIALNRVQDMIVTDDMHERKRLMFEHSDAFVALPGGIGTLEELVEQ
CEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEECCCCCCHHHHHHHH
MTWQQLGRHRKPILIANIDGFWDPLLGLLAHMTETAFIRPQFSVNVLTADSVSEILPKLR
HHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHEECCCCEEEEEEHHHHHHHHHHHH
AAAAPEQAKTMAPEIARRL
HHCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043; 2116366 [H]