Click here to switch to the map view.

The map label for this gene is 86750470

Identifier: 86750470

GI number: 86750470

Start: 3840944

End: 3842905

Strand: Direct

Name: 86750470

Synonym: RPB_3359

Alternate gene names: NA

Gene position: 3840944-3842905 (Clockwise)

Preceding gene: 86750469

Following gene: 86750480

Centisome position: 72.04

GC content: 62.64

Gene sequence:

>1962_bases
ATGGAACTGCCAAGGCGTGCCCGTGGTGACGAACTATTGGCCCCCGGCAAGATGCTGGCTCTGCGGGAGCGGCTGCGACA
TCTTTCCGGAAGCCACGACCTGACGACCGTCATCGTCAGTGCCTTTGATCACAGAACGAGGGTCCTTCCCTTCATTCTTG
CCGATACGCGGATGGCCCCCGGCGGCGTGCGGGCGATCGGGTCGGCGCTCGTGGACGTCGGCTTCGACAAAACGCGGATC
GTCCTCCAGCAGTGGAATCGCAATTTCAGCCCGTTGCACATGCGCCTTGATGGCCGCATTCCGGATCTGTTCCTGGTTTC
GAGCATGCATCTGCATTCGGCGGAGTGCGACCGACTGATCCGGGAGGCCTGCCGGATCGAGCCGGACAAGCGCCCGCTGA
TCATCGTGGGCGGTCCGCGGATCCGCTACGAGCCCTGGCACGTCTTCGGTGCAGACCCGAACGCGAACTGGGCCGCGGAC
GTCGCCGTCACCGGCGAAGAGTTTGTTTTTCTGGAATTGCTGGAAGTGCTGCTGTCGATGCGCGCGGGCGGCGAATCGAT
GCGCTCGGTGTTCGCCCGCGCGCGCGATAGCGGCGCCCTCGACCACGTCGCGGGGATCGTCTACGCGCGCAGCGCGCCGC
GCGGCGGACCGATCGAGGAACTGATCGACACCGGCGTCCAGCGCCTGCTCGGCGATCTCGATGAACTTCCCGACTCGGTC
CACGGCTACAAACTGCTGGAGACGCCGAGCAACGAGACGACGCTGGCGAGCCATGCCTTGCCCGCCAATCGTGTGAGGAA
GTTCAGCCCGATCGCCGGGATCGTCATGACGGCCGGCTGCAAGTTTCGTTGCTCCTACTGTCCGATACCTGCCTACAACC
AGTCGCAGTTCCGGGCCAAGAGCGGTGAGCGCATCGCTGAGGAAATCGGGCAGATCGCCACCACCTTCGGCCTCTATAAT
TTCTTCGGCGCCGACGACAATTTCTTCAACAACACCAAACGCACGCTTGATATCGCCGGGACCCTGGCCCGCAAAGCCCG
GGCCGGCCGACCGTTCTGCAAGATCAGGATCGGAACGGAAGTCACGGTGCACGACACGGTCGGAATGCGCGATCACCTGC
CGCTGATCCGCGACGCCGGTTTCGCAGCAGTCTGGCTCGGCGTCGAGGACATGACCGCGACGCTGGTCAAGAAGGCGCAA
GACAAGGACAAGACCGAACTCGCGTTCCGATTGCTGCGGGAAAACAACATTCTGCCGATGCCGATGATGATGCATCACGA
CAGCCAGCCGCTGGTGACCTGGAAATCGAACTACGGTCTCATCAACCAGATCAGGTTGTTGCGCAAGGCGGGATCGATCA
CCACGCAAGTGATGATGCTGACGCCGGCGCCCGGATCGAAATGGTACGAGAACGTGTTCGATTCGGGGATGGCTTTCAGC
AAGGCGGGCGATGTCGCGGTCGAGCCGCACATCATGGACGGCAATTATGTCGTCGCCTCGAAACACGCCCGGCCTTGGCT
CAAGCAGATGAATCTGCTGCTCGCCTACACCTACTTCTTCAATCCTGTTCGCTTTCTGAGCGCGCTGATCTTCTCGAAGT
CGGCGGGGGTGTTCTCGAGCGCGGAAACCAGGCCGGCAGAAGAGGTCGAGGATTACTCGGCCGCGAAGAAGATGCTTCGC
CGCGCCGAACTCAGAGCACGGGCTCATCTGATCGATGCCGGCGCGCAGATCTACGGCATGATCGGGCTGATCCAAACCTA
CCGCCGAACGGCGGGATGGGCATGGCGGCTGTTTCGCGATGATATTCAGCGATACGACCGGGCTCCCGTCAGTCCGATCC
CAATGCGCGGCGTCGGCGACAAGCCTTCCGATCACGCGCTCCCGGGAACGATTGATCTGCGCGACCTCGGAAAGCCCGTC
GTTCGCGAAGCGTCGGCGCGGGACATGGCGGGGACTGCCTGA

Upstream 100 bases:

>100_bases
TCAGCCTGCGAAGTTCCAACCGCTGGTCGTCAACTTGACCCGGTCGTGCATTGATCTCACACTGACATGATCAGGGCGTC
GGCGACGAACGAGGCATTAC

Downstream 100 bases:

>100_bases
CCAGGGACGGTTTCACCGCCCGGTCTTCACCCGCGTCCACAGCCGGTTGATCACGCGCTGCGTCGCCGCGTCGCGCGCGG
TGATGACGAACAGGCGCGCC

Product: radical SAM family protein

Products: NA

Alternate protein names: Methyltransferase Related Protein; Radical SAM Family Protein

Number of amino acids: Translated: 653; Mature: 653

Protein sequence:

>653_residues
MELPRRARGDELLAPGKMLALRERLRHLSGSHDLTTVIVSAFDHRTRVLPFILADTRMAPGGVRAIGSALVDVGFDKTRI
VLQQWNRNFSPLHMRLDGRIPDLFLVSSMHLHSAECDRLIREACRIEPDKRPLIIVGGPRIRYEPWHVFGADPNANWAAD
VAVTGEEFVFLELLEVLLSMRAGGESMRSVFARARDSGALDHVAGIVYARSAPRGGPIEELIDTGVQRLLGDLDELPDSV
HGYKLLETPSNETTLASHALPANRVRKFSPIAGIVMTAGCKFRCSYCPIPAYNQSQFRAKSGERIAEEIGQIATTFGLYN
FFGADDNFFNNTKRTLDIAGTLARKARAGRPFCKIRIGTEVTVHDTVGMRDHLPLIRDAGFAAVWLGVEDMTATLVKKAQ
DKDKTELAFRLLRENNILPMPMMMHHDSQPLVTWKSNYGLINQIRLLRKAGSITTQVMMLTPAPGSKWYENVFDSGMAFS
KAGDVAVEPHIMDGNYVVASKHARPWLKQMNLLLAYTYFFNPVRFLSALIFSKSAGVFSSAETRPAEEVEDYSAAKKMLR
RAELRARAHLIDAGAQIYGMIGLIQTYRRTAGWAWRLFRDDIQRYDRAPVSPIPMRGVGDKPSDHALPGTIDLRDLGKPV
VREASARDMAGTA

Sequences:

>Translated_653_residues
MELPRRARGDELLAPGKMLALRERLRHLSGSHDLTTVIVSAFDHRTRVLPFILADTRMAPGGVRAIGSALVDVGFDKTRI
VLQQWNRNFSPLHMRLDGRIPDLFLVSSMHLHSAECDRLIREACRIEPDKRPLIIVGGPRIRYEPWHVFGADPNANWAAD
VAVTGEEFVFLELLEVLLSMRAGGESMRSVFARARDSGALDHVAGIVYARSAPRGGPIEELIDTGVQRLLGDLDELPDSV
HGYKLLETPSNETTLASHALPANRVRKFSPIAGIVMTAGCKFRCSYCPIPAYNQSQFRAKSGERIAEEIGQIATTFGLYN
FFGADDNFFNNTKRTLDIAGTLARKARAGRPFCKIRIGTEVTVHDTVGMRDHLPLIRDAGFAAVWLGVEDMTATLVKKAQ
DKDKTELAFRLLRENNILPMPMMMHHDSQPLVTWKSNYGLINQIRLLRKAGSITTQVMMLTPAPGSKWYENVFDSGMAFS
KAGDVAVEPHIMDGNYVVASKHARPWLKQMNLLLAYTYFFNPVRFLSALIFSKSAGVFSSAETRPAEEVEDYSAAKKMLR
RAELRARAHLIDAGAQIYGMIGLIQTYRRTAGWAWRLFRDDIQRYDRAPVSPIPMRGVGDKPSDHALPGTIDLRDLGKPV
VREASARDMAGTA
>Mature_653_residues
MELPRRARGDELLAPGKMLALRERLRHLSGSHDLTTVIVSAFDHRTRVLPFILADTRMAPGGVRAIGSALVDVGFDKTRI
VLQQWNRNFSPLHMRLDGRIPDLFLVSSMHLHSAECDRLIREACRIEPDKRPLIIVGGPRIRYEPWHVFGADPNANWAAD
VAVTGEEFVFLELLEVLLSMRAGGESMRSVFARARDSGALDHVAGIVYARSAPRGGPIEELIDTGVQRLLGDLDELPDSV
HGYKLLETPSNETTLASHALPANRVRKFSPIAGIVMTAGCKFRCSYCPIPAYNQSQFRAKSGERIAEEIGQIATTFGLYN
FFGADDNFFNNTKRTLDIAGTLARKARAGRPFCKIRIGTEVTVHDTVGMRDHLPLIRDAGFAAVWLGVEDMTATLVKKAQ
DKDKTELAFRLLRENNILPMPMMMHHDSQPLVTWKSNYGLINQIRLLRKAGSITTQVMMLTPAPGSKWYENVFDSGMAFS
KAGDVAVEPHIMDGNYVVASKHARPWLKQMNLLLAYTYFFNPVRFLSALIFSKSAGVFSSAETRPAEEVEDYSAAKKMLR
RAELRARAHLIDAGAQIYGMIGLIQTYRRTAGWAWRLFRDDIQRYDRAPVSPIPMRGVGDKPSDHALPGTIDLRDLGKPV
VREASARDMAGTA

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 72703; Mature: 72703

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELPRRARGDELLAPGKMLALRERLRHLSGSHDLTTVIVSAFDHRTRVLPFILADTRMAP
CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHEEEEEECCCCCC
GGVRAIGSALVDVGFDKTRIVLQQWNRNFSPLHMRLDGRIPDLFLVSSMHLHSAECDRLI
CHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHH
REACRIEPDKRPLIIVGGPRIRYEPWHVFGADPNANWAADVAVTGEEFVFLELLEVLLSM
HHHHCCCCCCCCEEEECCCEEEECCCEEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHH
RAGGESMRSVFARARDSGALDHVAGIVYARSAPRGGPIEELIDTGVQRLLGDLDELPDSV
HCCCHHHHHHHHHHCCCCCHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCHH
HGYKLLETPSNETTLASHALPANRVRKFSPIAGIVMTAGCKFRCSYCPIPAYNQSQFRAK
CCEEEEECCCCCCCHHHHCCCHHHHHHHCCHHHHHEECCCEEEECCCCCCCCCCHHHHHH
SGERIAEEIGQIATTFGLYNFFGADDNFFNNTKRTLDIAGTLARKARAGRPFCKIRIGTE
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCE
VTVHDTVGMRDHLPLIRDAGFAAVWLGVEDMTATLVKKAQDKDKTELAFRLLRENNILPM
EEEECCCCCCCCCCHHHCCCCEEEEECHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCC
PMMMHHDSQPLVTWKSNYGLINQIRLLRKAGSITTQVMMLTPAPGSKWYENVFDSGMAFS
CHHHCCCCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHCCCCCC
KAGDVAVEPHIMDGNYVVASKHARPWLKQMNLLLAYTYFFNPVRFLSALIFSKSAGVFSS
CCCCEEECCEEECCCEEEECCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCC
AETRPAEEVEDYSAAKKMLRRAELRARAHLIDAGAQIYGMIGLIQTYRRTAGWAWRLFRD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHH
DIQRYDRAPVSPIPMRGVGDKPSDHALPGTIDLRDLGKPVVREASARDMAGTA
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHCCCHHHHHCCCCCCCCCC
>Mature Secondary Structure
MELPRRARGDELLAPGKMLALRERLRHLSGSHDLTTVIVSAFDHRTRVLPFILADTRMAP
CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHEEEEEECCCCCC
GGVRAIGSALVDVGFDKTRIVLQQWNRNFSPLHMRLDGRIPDLFLVSSMHLHSAECDRLI
CHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHH
REACRIEPDKRPLIIVGGPRIRYEPWHVFGADPNANWAADVAVTGEEFVFLELLEVLLSM
HHHHCCCCCCCCEEEECCCEEEECCCEEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHH
RAGGESMRSVFARARDSGALDHVAGIVYARSAPRGGPIEELIDTGVQRLLGDLDELPDSV
HCCCHHHHHHHHHHCCCCCHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCHH
HGYKLLETPSNETTLASHALPANRVRKFSPIAGIVMTAGCKFRCSYCPIPAYNQSQFRAK
CCEEEEECCCCCCCHHHHCCCHHHHHHHCCHHHHHEECCCEEEECCCCCCCCCCHHHHHH
SGERIAEEIGQIATTFGLYNFFGADDNFFNNTKRTLDIAGTLARKARAGRPFCKIRIGTE
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCE
VTVHDTVGMRDHLPLIRDAGFAAVWLGVEDMTATLVKKAQDKDKTELAFRLLRENNILPM
EEEECCCCCCCCCCHHHCCCCEEEEECHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCC
PMMMHHDSQPLVTWKSNYGLINQIRLLRKAGSITTQVMMLTPAPGSKWYENVFDSGMAFS
CHHHCCCCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHCCCCCC
KAGDVAVEPHIMDGNYVVASKHARPWLKQMNLLLAYTYFFNPVRFLSALIFSKSAGVFSS
CCCCEEECCEEECCCEEEECCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCC
AETRPAEEVEDYSAAKKMLRRAELRARAHLIDAGAQIYGMIGLIQTYRRTAGWAWRLFRD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHH
DIQRYDRAPVSPIPMRGVGDKPSDHALPGTIDLRDLGKPVVREASARDMAGTA
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHCCCHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA