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The map label for this gene is 86750426

Identifier: 86750426

GI number: 86750426

Start: 3789946

End: 3792522

Strand: Direct

Name: 86750426

Synonym: RPB_3315

Alternate gene names: NA

Gene position: 3789946-3792522 (Clockwise)

Preceding gene: 86750425

Following gene: 86750427

Centisome position: 71.08

GC content: 63.76

Gene sequence:

>2577_bases
GTGGCAACCGGCTTCTCTGTATTCGTGAACATCGGCGGCAAGCTCAACCCGAGCCTTGCCGCCGCTGTCGGCCAGGCGAA
GGCGCAAGTCGGCGGACTTAGCGCTTCGCTCGCCGGCATTGGCGCGCGCTTGAACGCCCCGTTCATTGCCGCAAACAAGC
ACCTGGACGCCACGTCGAAACGTATGGCAGCGGTGCAGCGGAAGGGCCGCGATATGTCGTTGGCCGTGACGGCCCCGGCC
GCATGGTTTGGCGCGAACATGGTCAAGGACGTTGCTGATTTTGCGAAGGCCGGAAACTTTTCGGAGGCGCTTGGCGACAT
CCCCAAAGAGCAGCGCCTTGAGCTTGAGAAGATCGCTCAGAGCTTCTCGGCAAAATACGATGCCGGCGGTGCGACCGGCA
TCATGAAGACTGCGACCGAACTGATCAAAGCCGGCTTCACCTATGCGCAGGCGCGCGGTTCACTTGAACAAGTGCTTGCC
GCGTCGGCGCTGTCTGGTGACATGGCGGCAGCCGATCTCGGCGCGGCGATCAGCAAGAGCATCGTACAGTTTCAATTGCC
GTTCAAGACGCTGGAACAGGCGTCGGCATCTTCTAAGGTGGTGAGCGACCGCATGGTGTATGCGGCTGTCTCAACCACCG
CTTCGATGCGCGATATGTCCGAGTCATTCAAATTTGCCGCTGGCATTGCGAGTAGCACGGGTAGCTCGCTTGATCAGACC
ACCGGCCTGATCATGAAATTCGCGCAGGCCGGCGTGCTTGGCAGCGAGGCCGGCGTGGCGCTGCGCAGCGCGCTTGTCCG
GCTGGTCAAGATGCCGAAGGGCGGCATGGCCGCACTGTCGCGGATCGGAATGAACCTTGGCGACTACACGTCGGCACGGC
CGATCACCTCGGGTGGCATCGTCGGTGGCTTACAGGCCGGCGGCATTGACGTATCCAAATCCGTCGAAAAGCAGATCGCC
GCGATCATCAAGGCCGGCGGTGGACAGAGCGCGCAGGTTGCCGCGATCACCAAAGCTGTGCAGAGCGGCATGGGCAGTTC
GTCGGCTGTTGACGCGAATGAGATTGCCGAGTCGGTGAACGCCGCATATACGGCGGCCGGATCGAAGATCGACATTACCA
GGTTCTTTGAGGATTTGCGCGCCAAGCTGGAAAGCGGAGCGGCGACCACCGGCGACATTGCGCAGATCTTGGAGGCCCGG
CATATCAGCCGCTACATGGCGTTGCTGCGCGGCGACAAGCTTTCAGACGTGATCGAAAAGATCGGACGGGAAGCCGATGG
ATACGCTGAGGCCCGCTACAAAATCGCAAACCAAGGCTTGCCGGCCGAAATCCTGAAATTGAACTCGGCAGTTTTCGAGT
TGAAGAACACGCTGGTTTCGGCGGTGACGCCCGAACTTGTGACCATCTTCGATCGCATCGGCGCATCGTTGAAGGGTATC
GCCGGGAGCAATCCGGCCGTTCTGAAACTCGGCATCGGCTTTGTTGCGGCTGCCGCTGCGGCGGGCCCGCTGATGTTCGC
TCTTGGCGCAATCGGCCGGCTCGGGGTGTTCGCGCTGAAAGGCCTCAGCACGGGGCTGGCACTGTTGCTGGCACCGATCG
GCATGGCGGCGCGTGGCATCGTCGGGCTTACCGCTGCACTCTCTGTGGGGCTTGTGGCGGCCGTGGCGCGGACCCGTGCA
GCACTCGCCGGCCTCTTGGCCCTGACGGCGGTCGGCGGCGCTGGCACGGGCCTCGCCGCCATCGGCACGGGCTTGCTCGC
CTTCGGCCGCGCGGTCCTGACGTTCCCGCTGGTGGCCCTGCGTGGCGTCGGGCTCGCGATGGGCGCGCTGCTGTTGAACC
CGGTCGGGCTGGTCTTCACGGGCCTTGTCACCGCCTTGGCCGCGCTTGGGACGTGGATCGCCAACAATTGGGAGGGCCTG
AAGAGCTTCTTTGCTGGTTTCGGCGACGGGTTCATGAAGGGACTTGGTCCGGCCGCCGGGGTGATCAAGAGCATTGGCGA
CGGCCTCGCGTCCGCCTTCGGGTGGCTGGGCAAGTTGCTTGGCCCGTTGGACGAGTCCGGCGCCAAATGGAAGTCGTGGG
GAGAGACCATGGGCGGCGCCGTCGCTCAAGGTGTCAACGCGGTGATCGACGGGATCAAGAGCCTGATTGGCTTCTTCGGC
ACGGTCATCGAGAAGGCTGTGGCGCTCGGCGGTGCCATCCGTAATCTGTGGTCAGCTCCGAAGGCGTTGCCGAATGCGCC
TCGCGCCGCGCCGCCCATTGCTGGCGCTCGCGCGCTTGGCGGCCCCGTGACCTATGGCAAGCCGTACCTGGTCGGTGAGC
GCGGCCCCGAACTGTTCGTGCCCGGCGCGACCGGCCGAATCGAGACGAACGGCGCTCTGCGGCAAATGACCTCCAGCGGG
GCAGCGGCGGCCGCGGGCTCGACGACCACGACCCGCACGAGCACGTATTCGTTTTCCAACCATTGGACCATCAATGGCGC
CGAAAATCCCCGCGCTATTGCCGATCAAATTGACGGCCGGTTCCGGAGGCTGCTTGCAGATCTTGAAAGCGAGCAAAGGG
GGCTGTTGAGCGACTGA

Upstream 100 bases:

>100_bases
GTCCCGGCACGTATCTCCCGTCCCTCTCGGAAATCGTCTTGCCGCCTGCGCTGCTCGGGCAGGATTTCATTTGGCCCCGG
CCGAAGAAGGCGTAACCAAC

Downstream 100 bases:

>100_bases
AATCTGTCCCTCGCCCGAACACTGTCGAAAGCAAATCGCTTCAGCAGCTAAAATACCGCGGCCACCGAGACCAACACAAA
CCACCAATGGAATACCGCAG

Product: Phage tail tape measure protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 858; Mature: 857

Protein sequence:

>858_residues
MATGFSVFVNIGGKLNPSLAAAVGQAKAQVGGLSASLAGIGARLNAPFIAANKHLDATSKRMAAVQRKGRDMSLAVTAPA
AWFGANMVKDVADFAKAGNFSEALGDIPKEQRLELEKIAQSFSAKYDAGGATGIMKTATELIKAGFTYAQARGSLEQVLA
ASALSGDMAAADLGAAISKSIVQFQLPFKTLEQASASSKVVSDRMVYAAVSTTASMRDMSESFKFAAGIASSTGSSLDQT
TGLIMKFAQAGVLGSEAGVALRSALVRLVKMPKGGMAALSRIGMNLGDYTSARPITSGGIVGGLQAGGIDVSKSVEKQIA
AIIKAGGGQSAQVAAITKAVQSGMGSSSAVDANEIAESVNAAYTAAGSKIDITRFFEDLRAKLESGAATTGDIAQILEAR
HISRYMALLRGDKLSDVIEKIGREADGYAEARYKIANQGLPAEILKLNSAVFELKNTLVSAVTPELVTIFDRIGASLKGI
AGSNPAVLKLGIGFVAAAAAAGPLMFALGAIGRLGVFALKGLSTGLALLLAPIGMAARGIVGLTAALSVGLVAAVARTRA
ALAGLLALTAVGGAGTGLAAIGTGLLAFGRAVLTFPLVALRGVGLAMGALLLNPVGLVFTGLVTALAALGTWIANNWEGL
KSFFAGFGDGFMKGLGPAAGVIKSIGDGLASAFGWLGKLLGPLDESGAKWKSWGETMGGAVAQGVNAVIDGIKSLIGFFG
TVIEKAVALGGAIRNLWSAPKALPNAPRAAPPIAGARALGGPVTYGKPYLVGERGPELFVPGATGRIETNGALRQMTSSG
AAAAAGSTTTTRTSTYSFSNHWTINGAENPRAIADQIDGRFRRLLADLESEQRGLLSD

Sequences:

>Translated_858_residues
MATGFSVFVNIGGKLNPSLAAAVGQAKAQVGGLSASLAGIGARLNAPFIAANKHLDATSKRMAAVQRKGRDMSLAVTAPA
AWFGANMVKDVADFAKAGNFSEALGDIPKEQRLELEKIAQSFSAKYDAGGATGIMKTATELIKAGFTYAQARGSLEQVLA
ASALSGDMAAADLGAAISKSIVQFQLPFKTLEQASASSKVVSDRMVYAAVSTTASMRDMSESFKFAAGIASSTGSSLDQT
TGLIMKFAQAGVLGSEAGVALRSALVRLVKMPKGGMAALSRIGMNLGDYTSARPITSGGIVGGLQAGGIDVSKSVEKQIA
AIIKAGGGQSAQVAAITKAVQSGMGSSSAVDANEIAESVNAAYTAAGSKIDITRFFEDLRAKLESGAATTGDIAQILEAR
HISRYMALLRGDKLSDVIEKIGREADGYAEARYKIANQGLPAEILKLNSAVFELKNTLVSAVTPELVTIFDRIGASLKGI
AGSNPAVLKLGIGFVAAAAAAGPLMFALGAIGRLGVFALKGLSTGLALLLAPIGMAARGIVGLTAALSVGLVAAVARTRA
ALAGLLALTAVGGAGTGLAAIGTGLLAFGRAVLTFPLVALRGVGLAMGALLLNPVGLVFTGLVTALAALGTWIANNWEGL
KSFFAGFGDGFMKGLGPAAGVIKSIGDGLASAFGWLGKLLGPLDESGAKWKSWGETMGGAVAQGVNAVIDGIKSLIGFFG
TVIEKAVALGGAIRNLWSAPKALPNAPRAAPPIAGARALGGPVTYGKPYLVGERGPELFVPGATGRIETNGALRQMTSSG
AAAAAGSTTTTRTSTYSFSNHWTINGAENPRAIADQIDGRFRRLLADLESEQRGLLSD
>Mature_857_residues
ATGFSVFVNIGGKLNPSLAAAVGQAKAQVGGLSASLAGIGARLNAPFIAANKHLDATSKRMAAVQRKGRDMSLAVTAPAA
WFGANMVKDVADFAKAGNFSEALGDIPKEQRLELEKIAQSFSAKYDAGGATGIMKTATELIKAGFTYAQARGSLEQVLAA
SALSGDMAAADLGAAISKSIVQFQLPFKTLEQASASSKVVSDRMVYAAVSTTASMRDMSESFKFAAGIASSTGSSLDQTT
GLIMKFAQAGVLGSEAGVALRSALVRLVKMPKGGMAALSRIGMNLGDYTSARPITSGGIVGGLQAGGIDVSKSVEKQIAA
IIKAGGGQSAQVAAITKAVQSGMGSSSAVDANEIAESVNAAYTAAGSKIDITRFFEDLRAKLESGAATTGDIAQILEARH
ISRYMALLRGDKLSDVIEKIGREADGYAEARYKIANQGLPAEILKLNSAVFELKNTLVSAVTPELVTIFDRIGASLKGIA
GSNPAVLKLGIGFVAAAAAAGPLMFALGAIGRLGVFALKGLSTGLALLLAPIGMAARGIVGLTAALSVGLVAAVARTRAA
LAGLLALTAVGGAGTGLAAIGTGLLAFGRAVLTFPLVALRGVGLAMGALLLNPVGLVFTGLVTALAALGTWIANNWEGLK
SFFAGFGDGFMKGLGPAAGVIKSIGDGLASAFGWLGKLLGPLDESGAKWKSWGETMGGAVAQGVNAVIDGIKSLIGFFGT
VIEKAVALGGAIRNLWSAPKALPNAPRAAPPIAGARALGGPVTYGKPYLVGERGPELFVPGATGRIETNGALRQMTSSGA
AAAAGSTTTTRTSTYSFSNHWTINGAENPRAIADQIDGRFRRLLADLESEQRGLLSD

Specific function: Unknown

COG id: COG5283

COG function: function code S; Phage-related tail protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 86908; Mature: 86777

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATGFSVFVNIGGKLNPSLAAAVGQAKAQVGGLSASLAGIGARLNAPFIAANKHLDATSK
CCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCEEECCCCCCHHHH
RMAAVQRKGRDMSLAVTAPAAWFGANMVKDVADFAKAGNFSEALGDIPKEQRLELEKIAQ
HHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHH
SFSAKYDAGGATGIMKTATELIKAGFTYAQARGSLEQVLAASALSGDMAAADLGAAISKS
HHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
IVQFQLPFKTLEQASASSKVVSDRMVYAAVSTTASMRDMSESFKFAAGIASSTGSSLDQT
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
TGLIMKFAQAGVLGSEAGVALRSALVRLVKMPKGGMAALSRIGMNLGDYTSARPITSGGI
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCC
VGGLQAGGIDVSKSVEKQIAAIIKAGGGQSAQVAAITKAVQSGMGSSSAVDANEIAESVN
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
AAYTAAGSKIDITRFFEDLRAKLESGAATTGDIAQILEARHISRYMALLRGDKLSDVIEK
HHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
IGREADGYAEARYKIANQGLPAEILKLNSAVFELKNTLVSAVTPELVTIFDRIGASLKGI
HCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCC
AGSNPAVLKLGIGFVAAAAAAGPLMFALGAIGRLGVFALKGLSTGLALLLAPIGMAARGI
CCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGLTAALSVGLVAAVARTRAALAGLLALTAVGGAGTGLAAIGTGLLAFGRAVLTFPLVAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
RGVGLAMGALLLNPVGLVFTGLVTALAALGTWIANNWEGLKSFFAGFGDGFMKGLGPAAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHCCHHHH
VIKSIGDGLASAFGWLGKLLGPLDESGAKWKSWGETMGGAVAQGVNAVIDGIKSLIGFFG
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVIEKAVALGGAIRNLWSAPKALPNAPRAAPPIAGARALGGPVTYGKPYLVGERGPELFV
HHHHHHHHHHHHHHHHHHCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCEEECCCCCCEEE
PGATGRIETNGALRQMTSSGAAAAAGSTTTTRTSTYSFSNHWTINGAENPRAIADQIDGR
CCCCCCEECCHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCEEECCCCCCHHHHHHHHHH
FRRLLADLESEQRGLLSD
HHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
ATGFSVFVNIGGKLNPSLAAAVGQAKAQVGGLSASLAGIGARLNAPFIAANKHLDATSK
CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCEEECCCCCCHHHH
RMAAVQRKGRDMSLAVTAPAAWFGANMVKDVADFAKAGNFSEALGDIPKEQRLELEKIAQ
HHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHH
SFSAKYDAGGATGIMKTATELIKAGFTYAQARGSLEQVLAASALSGDMAAADLGAAISKS
HHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
IVQFQLPFKTLEQASASSKVVSDRMVYAAVSTTASMRDMSESFKFAAGIASSTGSSLDQT
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
TGLIMKFAQAGVLGSEAGVALRSALVRLVKMPKGGMAALSRIGMNLGDYTSARPITSGGI
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCC
VGGLQAGGIDVSKSVEKQIAAIIKAGGGQSAQVAAITKAVQSGMGSSSAVDANEIAESVN
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
AAYTAAGSKIDITRFFEDLRAKLESGAATTGDIAQILEARHISRYMALLRGDKLSDVIEK
HHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
IGREADGYAEARYKIANQGLPAEILKLNSAVFELKNTLVSAVTPELVTIFDRIGASLKGI
HCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCC
AGSNPAVLKLGIGFVAAAAAAGPLMFALGAIGRLGVFALKGLSTGLALLLAPIGMAARGI
CCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGLTAALSVGLVAAVARTRAALAGLLALTAVGGAGTGLAAIGTGLLAFGRAVLTFPLVAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
RGVGLAMGALLLNPVGLVFTGLVTALAALGTWIANNWEGLKSFFAGFGDGFMKGLGPAAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHCCHHHH
VIKSIGDGLASAFGWLGKLLGPLDESGAKWKSWGETMGGAVAQGVNAVIDGIKSLIGFFG
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVIEKAVALGGAIRNLWSAPKALPNAPRAAPPIAGARALGGPVTYGKPYLVGERGPELFV
HHHHHHHHHHHHHHHHHHCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCEEECCCCCCEEE
PGATGRIETNGALRQMTSSGAAAAAGSTTTTRTSTYSFSNHWTINGAENPRAIADQIDGR
CCCCCCEECCHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCEEECCCCCCHHHHHHHHHH
FRRLLADLESEQRGLLSD
HHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA