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The map label for this gene is 86750425

Identifier: 86750425

GI number: 86750425

Start: 3789128

End: 3789940

Strand: Direct

Name: 86750425

Synonym: RPB_3314

Alternate gene names: NA

Gene position: 3789128-3789940 (Clockwise)

Preceding gene: 86750424

Following gene: 86750426

Centisome position: 71.07

GC content: 63.59

Gene sequence:

>813_bases
ATGGGCATCCTCAATACCCTGTTCGGCGGCGCAACCGCTACCAGTGCGCAAATCGCAGAAGCCATCACCAAGGCCGAAGC
CGAACTCGCCACCGTGCGAAGCAAGATCAAGGCCGCGATGGCCGGCTTGGCGACGTTCACTGACGAACAGCATATCGCCG
CCGAAGCCAAGCAAGCGGAACTGAAGCGGGCGGAAGCTCGCCTGGTCGCGCGTATCACCGACCTGAGCGCCGACCTCGCG
ACCGTGAAGGCCGCAGAGGCAGCGGCTGAACGCGCCGCAGAGGAAGCGGCGTTCGATGCGCGCTTCAAAGCGGCGCGCGC
CGCTGTGAACACGGATGCACTTAAGCACCTTCGCGAATATCAGAAGGCAGCCACCGCGGTGGCGGCGGCGCTCGCCGCGC
TCGAGTCGATCTCTTCCGAAGTGGAGGACGTGAACGCAGAATTGCGCAAGCGCGGCCGTCATGACGAGACGCTTCCTTCC
TACAGTAAGCTGCATCGAAAAGCGCCGGACCGGCCGGAATCGGTCCGCAAGGAACGTTGCAAGGTGTGGGTGCTGACCGA
CCCCTACAACGGCGCGGAGACGATCCGCAAGGCCACCATCGGGCCTGACGGCGAAGTTGTACCCATCGGGCAGCCGGACC
CGTTCGATCGGCAGGGCTGGCGGCAAGGGACTTACCATCTGGAAGAACGTGAGATCGTCGTGGAAAAGGTTTCGTTCCGT
CCCGGCACGTATCTCCCGTCCCTCTCGGAAATCGTCTTGCCGCCTGCGCTGCTCGGGCAGGATTTCATTTGGCCCCGGCC
GAAGAAGGCGTAA

Upstream 100 bases:

>100_bases
GTGGTCGCGAAGCCGTCGCTGCCTATTATCGGGGCGAATTTGAACCCCTGCGCTAATTTCGCTCGAACAAGCAACAACCA
CAACTCAAGGACGATGACAG

Downstream 100 bases:

>100_bases
CCAACGTGGCAACCGGCTTCTCTGTATTCGTGAACATCGGCGGCAAGCTCAACCCGAGCCTTGCCGCCGCTGTCGGCCAG
GCGAAGGCGCAAGTCGGCGG

Product: mucin-associated surface protein (MASP), putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 269

Protein sequence:

>270_residues
MGILNTLFGGATATSAQIAEAITKAEAELATVRSKIKAAMAGLATFTDEQHIAAEAKQAELKRAEARLVARITDLSADLA
TVKAAEAAAERAAEEAAFDARFKAARAAVNTDALKHLREYQKAATAVAAALAALESISSEVEDVNAELRKRGRHDETLPS
YSKLHRKAPDRPESVRKERCKVWVLTDPYNGAETIRKATIGPDGEVVPIGQPDPFDRQGWRQGTYHLEEREIVVEKVSFR
PGTYLPSLSEIVLPPALLGQDFIWPRPKKA

Sequences:

>Translated_270_residues
MGILNTLFGGATATSAQIAEAITKAEAELATVRSKIKAAMAGLATFTDEQHIAAEAKQAELKRAEARLVARITDLSADLA
TVKAAEAAAERAAEEAAFDARFKAARAAVNTDALKHLREYQKAATAVAAALAALESISSEVEDVNAELRKRGRHDETLPS
YSKLHRKAPDRPESVRKERCKVWVLTDPYNGAETIRKATIGPDGEVVPIGQPDPFDRQGWRQGTYHLEEREIVVEKVSFR
PGTYLPSLSEIVLPPALLGQDFIWPRPKKA
>Mature_269_residues
GILNTLFGGATATSAQIAEAITKAEAELATVRSKIKAAMAGLATFTDEQHIAAEAKQAELKRAEARLVARITDLSADLAT
VKAAEAAAERAAEEAAFDARFKAARAAVNTDALKHLREYQKAATAVAAALAALESISSEVEDVNAELRKRGRHDETLPSY
SKLHRKAPDRPESVRKERCKVWVLTDPYNGAETIRKATIGPDGEVVPIGQPDPFDRQGWRQGTYHLEEREIVVEKVSFRP
GTYLPSLSEIVLPPALLGQDFIWPRPKKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29362; Mature: 29230

Theoretical pI: Translated: 7.72; Mature: 7.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGILNTLFGGATATSAQIAEAITKAEAELATVRSKIKAAMAGLATFTDEQHIAAEAKQAE
CCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LKRAEARLVARITDLSADLATVKAAEAAAERAAEEAAFDARFKAARAAVNTDALKHLREY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QKAATAVAAALAALESISSEVEDVNAELRKRGRHDETLPSYSKLHRKAPDRPESVRKERC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCHHHHHHHHC
KVWVLTDPYNGAETIRKATIGPDGEVVPIGQPDPFDRQGWRQGTYHLEEREIVVEKVSFR
EEEEEECCCCCHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC
PGTYLPSLSEIVLPPALLGQDFIWPRPKKA
CCCCCCCHHHHHCCHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
GILNTLFGGATATSAQIAEAITKAEAELATVRSKIKAAMAGLATFTDEQHIAAEAKQAE
CCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LKRAEARLVARITDLSADLATVKAAEAAAERAAEEAAFDARFKAARAAVNTDALKHLREY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QKAATAVAAALAALESISSEVEDVNAELRKRGRHDETLPSYSKLHRKAPDRPESVRKERC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCHHHHHHHHC
KVWVLTDPYNGAETIRKATIGPDGEVVPIGQPDPFDRQGWRQGTYHLEEREIVVEKVSFR
EEEEEECCCCCHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC
PGTYLPSLSEIVLPPALLGQDFIWPRPKKA
CCCCCCCHHHHHCCHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA