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The map label for this gene is ifcA [H]

Identifier: 86750286

GI number: 86750286

Start: 3633044

End: 3634369

Strand: Direct

Name: ifcA [H]

Synonym: RPB_3175

Alternate gene names: 86750286

Gene position: 3633044-3634369 (Clockwise)

Preceding gene: 86750282

Following gene: 86750287

Centisome position: 68.14

GC content: 71.19

Gene sequence:

>1326_bases
TTGAATTCGACATGGGATGTCGCGGTGATCGGAGGCGGGCTCGCCGGGCTGTGCGCGGCGATCGCCGCACGCCGCGCCGG
CGTCTCGGTCCGCCTGCTGGAGAGCGCGCCCCCGGCGTTCCGCGGCGGCAATGCCCGCCATGCCCGCAATTTCCGCGTCG
TACACGACGGGCCGACGCCCTATGTCCCCGACGCCTATCAGCCGCGTGAATTTCTCGACGACCTCGATCGCGTGACGCAA
GGCGACGGCAATCATCGGCTCGCGCAGCGTCTGGTCGCGGAGTCGGACGGCATCGCGGACTGGCTGATGGCCAACGGCGT
CGCGCTGCAGGCGCCCGACACCGGTGTCGTGCCGTATTCCCGCCGCACCGTGTTTCCGCTGGGTGGCGGCAAGGCGATAA
TCAACGCGCTCTATGCCACTGCGACCGACATCGGAGTCGCGATCAGCACCGGCAGCGAAGTGGCATCGCTTCGCCGATCC
ACCAACGGCACCTGGAGCATCGTCGCCACGACGGCAGCGCCCGACGCAGCGGCGATCGATGCCCGCAGCGTCGTGGTCTG
TGCCGGCGGCGCCGGCGCCGATCCGGCGTGGCTGCGATCGCATTACGGCGCCAGCGCCGATCGCTTCATGGTCCGCGGCA
CGCCCTATGCCGACGGGCGGATGCTGGCCGATCTGATCGCCAGCGGCGCACGCAGCGTCGGCGATCCGCGCGTTGGCCAT
ATCGTGGCGGTGGACGCGCGCGGGCCGCGGTTCGACGGCGGCATCGTCACCCGGATCACCGCGATCCCCTACGGAATGGT
GGTCGATGGTTCGGCGACGCGGATCGACGCCGCCGGCGCCGGCGCCGAGCCGACGCATTATGCCCGCTGGGGGCCGCGGA
TCGCCGCCTGCGACGCTCAGACGGCCTATCTGGTTCTCGACGCCGACGGATTGCAGCGGGCGGCGCCGCAGGCGTTTCCG
CCGATCAGCGGCGCGACCATCGCCGACCTCGCCGAAGCGCTCGGGCTCGATCCGGCGACGCTCGCGCAAAGCGTCGACGC
CTTCAACGCCGCGCGGCCCGCCGGCGCGCCGCCGATCGCGGCCGCGCCGTTCGCCGCCTATCCGATGCGCCCCGGCGTCA
CCTTCATGCACTACGGAGTCGCAGTCGACGACCACATGCGGATCGTCTGGGCCGACGACCGCCGCAACGACAGCCTGTTT
GCGGCCGGCATGATCATGGCGGCCAATGTGATCGGGCACGGCTATCTGGCGGGCCTCGGCCTCACCCTCGCGGCCGTATT
CGGGCGGCTCGCTGGAGAGGAGGCGGCGCGTCATGTTCTCGGGTGA

Upstream 100 bases:

>100_bases
CGGGCCCTAAGACGAATTGCGCAGACGACGCGCCGAGCGGACCCGGGGCGGCGTTCCGCGATCACCGCCGTCGGCGGAGT
CTGTCGGGAGTCGTGCCGAG

Downstream 100 bases:

>100_bases
GATGCCGACCGATGAACTGACTGCGGAGGCCGAGCGCGTGCTGCGGATCTGCACCGCCTGCATGTATTGCGACGGGCTGT
GCCCGGTGTTTCCGGCGATC

Product: tricarballylate dehydrogenase

Products: NA

Alternate protein names: Fe(3+)-induced flavocytochrome C3; Ifc3; Iron(III)-induced flavocytochrome C3 [H]

Number of amino acids: Translated: 441; Mature: 441

Protein sequence:

>441_residues
MNSTWDVAVIGGGLAGLCAAIAARRAGVSVRLLESAPPAFRGGNARHARNFRVVHDGPTPYVPDAYQPREFLDDLDRVTQ
GDGNHRLAQRLVAESDGIADWLMANGVALQAPDTGVVPYSRRTVFPLGGGKAIINALYATATDIGVAISTGSEVASLRRS
TNGTWSIVATTAAPDAAAIDARSVVVCAGGAGADPAWLRSHYGASADRFMVRGTPYADGRMLADLIASGARSVGDPRVGH
IVAVDARGPRFDGGIVTRITAIPYGMVVDGSATRIDAAGAGAEPTHYARWGPRIAACDAQTAYLVLDADGLQRAAPQAFP
PISGATIADLAEALGLDPATLAQSVDAFNAARPAGAPPIAAAPFAAYPMRPGVTFMHYGVAVDDHMRIVWADDRRNDSLF
AAGMIMAANVIGHGYLAGLGLTLAAVFGRLAGEEAARHVLG

Sequences:

>Translated_441_residues
MNSTWDVAVIGGGLAGLCAAIAARRAGVSVRLLESAPPAFRGGNARHARNFRVVHDGPTPYVPDAYQPREFLDDLDRVTQ
GDGNHRLAQRLVAESDGIADWLMANGVALQAPDTGVVPYSRRTVFPLGGGKAIINALYATATDIGVAISTGSEVASLRRS
TNGTWSIVATTAAPDAAAIDARSVVVCAGGAGADPAWLRSHYGASADRFMVRGTPYADGRMLADLIASGARSVGDPRVGH
IVAVDARGPRFDGGIVTRITAIPYGMVVDGSATRIDAAGAGAEPTHYARWGPRIAACDAQTAYLVLDADGLQRAAPQAFP
PISGATIADLAEALGLDPATLAQSVDAFNAARPAGAPPIAAAPFAAYPMRPGVTFMHYGVAVDDHMRIVWADDRRNDSLF
AAGMIMAANVIGHGYLAGLGLTLAAVFGRLAGEEAARHVLG
>Mature_441_residues
MNSTWDVAVIGGGLAGLCAAIAARRAGVSVRLLESAPPAFRGGNARHARNFRVVHDGPTPYVPDAYQPREFLDDLDRVTQ
GDGNHRLAQRLVAESDGIADWLMANGVALQAPDTGVVPYSRRTVFPLGGGKAIINALYATATDIGVAISTGSEVASLRRS
TNGTWSIVATTAAPDAAAIDARSVVVCAGGAGADPAWLRSHYGASADRFMVRGTPYADGRMLADLIASGARSVGDPRVGH
IVAVDARGPRFDGGIVTRITAIPYGMVVDGSATRIDAAGAGAEPTHYARWGPRIAACDAQTAYLVLDADGLQRAAPQAFP
PISGATIADLAEALGLDPATLAQSVDAFNAARPAGAPPIAAAPFAAYPMRPGVTFMHYGVAVDDHMRIVWADDRRNDSLF
AAGMIMAANVIGHGYLAGLGLTLAAVFGRLAGEEAARHVLG

Specific function: Catalyzes unidirectional fumarate reduction using artificial electron donors such as methyl viologen. The physiological reductant is unknown [H]

COG id: COG1053

COG function: function code C; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cytochrome c domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003953
- InterPro:   IPR013027
- InterPro:   IPR010960
- InterPro:   IPR011031 [H]

Pfam domain/function: PF00890 FAD_binding_2 [H]

EC number: =1.3.99.1 [H]

Molecular weight: Translated: 45520; Mature: 45520

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSTWDVAVIGGGLAGLCAAIAARRAGVSVRLLESAPPAFRGGNARHARNFRVVHDGPTP
CCCCEEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCEEEEECCCCC
YVPDAYQPREFLDDLDRVTQGDGNHRLAQRLVAESDGIADWLMANGVALQAPDTGVVPYS
CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHCCEEEECCCCCCCCCC
RRTVFPLGGGKAIINALYATATDIGVAISTGSEVASLRRSTNGTWSIVATTAAPDAAAID
CCEEEECCCCHHHHHHHHHHHHHCEEEEECCHHHHHHHHCCCCEEEEEEEECCCCCHHCC
ARSVVVCAGGAGADPAWLRSHYGASADRFMVRGTPYADGRMLADLIASGARSVGDPRVGH
CCEEEEECCCCCCCHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCE
IVAVDARGPRFDGGIVTRITAIPYGMVVDGSATRIDAAGAGAEPTHYARWGPRIAACDAQ
EEEECCCCCCCCCCEEEEEEECCCCEEECCCCCEEECCCCCCCCCCHHHCCCEEEEECCC
TAYLVLDADGLQRAAPQAFPPISGATIADLAEALGLDPATLAQSVDAFNAARPAGAPPIA
EEEEEEECCCHHHCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCC
AAPFAAYPMRPGVTFMHYGVAVDDHMRIVWADDRRNDSLFAAGMIMAANVIGHGYLAGLG
CCCCCCCCCCCCCEEEEEEEEECCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LTLAAVFGRLAGEEAARHVLG
HHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNSTWDVAVIGGGLAGLCAAIAARRAGVSVRLLESAPPAFRGGNARHARNFRVVHDGPTP
CCCCEEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCEEEEECCCCC
YVPDAYQPREFLDDLDRVTQGDGNHRLAQRLVAESDGIADWLMANGVALQAPDTGVVPYS
CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHCCEEEECCCCCCCCCC
RRTVFPLGGGKAIINALYATATDIGVAISTGSEVASLRRSTNGTWSIVATTAAPDAAAID
CCEEEECCCCHHHHHHHHHHHHHCEEEEECCHHHHHHHHCCCCEEEEEEEECCCCCHHCC
ARSVVVCAGGAGADPAWLRSHYGASADRFMVRGTPYADGRMLADLIASGARSVGDPRVGH
CCEEEEECCCCCCCHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCE
IVAVDARGPRFDGGIVTRITAIPYGMVVDGSATRIDAAGAGAEPTHYARWGPRIAACDAQ
EEEECCCCCCCCCCEEEEEEECCCCEEECCCCCEEECCCCCCCCCCHHHCCCEEEEECCC
TAYLVLDADGLQRAAPQAFPPISGATIADLAEALGLDPATLAQSVDAFNAARPAGAPPIA
EEEEEEECCCHHHCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCC
AAPFAAYPMRPGVTFMHYGVAVDDHMRIVWADDRRNDSLFAAGMIMAANVIGHGYLAGLG
CCCCCCCCCCCCCEEEEEEEEECCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LTLAAVFGRLAGEEAARHVLG
HHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10455032; 10581549 [H]