Click here to switch to the map view.

The map label for this gene is 86750282

Identifier: 86750282

GI number: 86750282

Start: 3628856

End: 3630658

Strand: Direct

Name: 86750282

Synonym: RPB_3171

Alternate gene names: NA

Gene position: 3628856-3630658 (Clockwise)

Preceding gene: 86750281

Following gene: 86750286

Centisome position: 68.06

GC content: 64.0

Gene sequence:

>1803_bases
ATGCTCGACACTGCGCCGAATGGCAAAGTCACGACGCTGCTCGCTTTGTTGGACGATGCCCTGAGCGCGAACGACCCGGA
TCGCGCGCTCGAGCTGTTTCAAACCGACTGCTACTGGCGCGACCTCGTGGCCTTCACCTGGAACATCAAGACGATGGAAG
GCAAGGACCAGGTCCGCGACATGCTCGGCGCGCGGCTGAACGACACCCGCCCGTCGAACTGGCGGATCGCCGACGGCGAG
GACGCCACCGAGGCCGACGGCGTCGTCGAGAGCTGGATCCAGTTCGACACCGCGGTCGCGCGCGGCTTCGGCCATCTGCG
CCTGAAGGACGGCCGGATCTGGACGCTGCTCACCACCATGGCGGAGCTGAAGGGTTTCGAGGAGCCGCTCGGCTTCGATC
GCCCGATGGGCGCCAGGCACGGCGTCGATCCGACGCGCAAGACTTGGAAGGAGGAGCGTGACGCCGAGACGGCCGAACTC
GGCATCAGCCGCCAGCCTTATTGCGTCATCATCGGCGGCGGCCAGGGCGGCATCGGACTCGCCGCCCGGCTGCGCCAGCT
CGGCGTGCCGACCATCATCATCGAAAAGAATGAGCGCCCCGGCGATAGCTGGCGCAAGCGCTACAAGTCGCTCTGCCTGC
ACGATCCGGTCTGGTACGACCACCTCCCCTATCTGCCGTTCCCGCCGAACTGGCCGGTGTTCGCCCCGAAGGACAAGATC
GGCGACTGGCTGGAAATGTACGCCAAGGTGATGGAGCTGAACTATTGGGGCTCGACGGTGTGCAAACGCGCTTCGTATGA
CGACGCGAAGCAGCAATGGACCGTGGTGGTCGAGCGCGACGGCCAGGAGATCACCCTGACGCCGAAACAGCTGGTGCTCG
CCACTGGCATGTCGGCCAAGCCGAACCTACCGAGTTTCGAGGGCATGGACCTCTTCAAGGGCGACCAGCACCACTCCTCG
CAGCATCCCGGCCCCGATGCCTACAAGGGCAAAAAGGCGGTGGTGATCGGCTCCAACAATTCCGCGCACGACATCTGCGC
GGCGCTGTGGGAGGCCGGCGCCGACGTCACCATGGTGCAGCGCTCGTCGACCCACGTGGTGAAGTCGGACTCGCTGATGG
AATTGGGCCTGTCCGCTCTTTATTCCGAACAGGCGGTGCGCAACGGCATGACGACGGCGAAGGCCGATCTGATCTTCGCC
TCGCTGCCCTACAAGATCCTCCACGAATTCCAGATCCCGGTCTACAACGCGATCCGCGAAGGCGACGCCGATTTCTACAA
GCGATTGGAAGCCGCCGGCTTCATGCTCGACTATGGCGACGACGAATCCGGCCTGTTCATGAAGTATCTGCGCCGCGGCT
CCGGTTACTACATCGATGTCGGCGCCTGCGACCTGATCGCCGACGGCCGCATCAAGCTGAAAAGCAATGTCGGCGTGACC
CGGCTCACTGAGCATGCGGTGATCCTCAGCGATGGCACCGAACTGCCAGCCGATGTCGTGGTCTACGCCACCGGCTACGG
CTCGATGAACGGCTTCGCGGCGGATCTGATCTCGCAGGACATCGCCGACAAGGTCGGCAAGGTCTGGGGGCTCGGCTCGA
ACACCACCAAGGACCCGGGCCCGTGGGAAGGCGAACAGCGCAACATGTGGAAGCCGACGCAACAAGAGGGACTCTGGTTC
CACGGCGGCAATCTGCACCAGTCGCGGCACTACTCGCAATTCCTCGCGCTGCAGCTCAAGGCGCGAATGGAGGGCATCCC
CACGCCGGTGTATGGGTTACAGCCGGTGCACCATTTGAAGTGA

Upstream 100 bases:

>100_bases
CATCACGCCGCTTCACGCTCGCGCTCCCGGCGCGCGATGTTAGGATCGTCGCAACGAGAACGCAGCACCGCGTCGCAACA
ATCATCAACGGGAGGATCTC

Downstream 100 bases:

>100_bases
ACGCGCGCGCGGCCGCGGCGGCGATCGCCGCGGGACTCCGGCGCCGTCCTCCCGATCGGGAGTGACGACGCCGACCGCGA
TTCGTCGACTAACTCACAAG

Product: flavin-containing monooxygenase FMO

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 600; Mature: 600

Protein sequence:

>600_residues
MLDTAPNGKVTTLLALLDDALSANDPDRALELFQTDCYWRDLVAFTWNIKTMEGKDQVRDMLGARLNDTRPSNWRIADGE
DATEADGVVESWIQFDTAVARGFGHLRLKDGRIWTLLTTMAELKGFEEPLGFDRPMGARHGVDPTRKTWKEERDAETAEL
GISRQPYCVIIGGGQGGIGLAARLRQLGVPTIIIEKNERPGDSWRKRYKSLCLHDPVWYDHLPYLPFPPNWPVFAPKDKI
GDWLEMYAKVMELNYWGSTVCKRASYDDAKQQWTVVVERDGQEITLTPKQLVLATGMSAKPNLPSFEGMDLFKGDQHHSS
QHPGPDAYKGKKAVVIGSNNSAHDICAALWEAGADVTMVQRSSTHVVKSDSLMELGLSALYSEQAVRNGMTTAKADLIFA
SLPYKILHEFQIPVYNAIREGDADFYKRLEAAGFMLDYGDDESGLFMKYLRRGSGYYIDVGACDLIADGRIKLKSNVGVT
RLTEHAVILSDGTELPADVVVYATGYGSMNGFAADLISQDIADKVGKVWGLGSNTTKDPGPWEGEQRNMWKPTQQEGLWF
HGGNLHQSRHYSQFLALQLKARMEGIPTPVYGLQPVHHLK

Sequences:

>Translated_600_residues
MLDTAPNGKVTTLLALLDDALSANDPDRALELFQTDCYWRDLVAFTWNIKTMEGKDQVRDMLGARLNDTRPSNWRIADGE
DATEADGVVESWIQFDTAVARGFGHLRLKDGRIWTLLTTMAELKGFEEPLGFDRPMGARHGVDPTRKTWKEERDAETAEL
GISRQPYCVIIGGGQGGIGLAARLRQLGVPTIIIEKNERPGDSWRKRYKSLCLHDPVWYDHLPYLPFPPNWPVFAPKDKI
GDWLEMYAKVMELNYWGSTVCKRASYDDAKQQWTVVVERDGQEITLTPKQLVLATGMSAKPNLPSFEGMDLFKGDQHHSS
QHPGPDAYKGKKAVVIGSNNSAHDICAALWEAGADVTMVQRSSTHVVKSDSLMELGLSALYSEQAVRNGMTTAKADLIFA
SLPYKILHEFQIPVYNAIREGDADFYKRLEAAGFMLDYGDDESGLFMKYLRRGSGYYIDVGACDLIADGRIKLKSNVGVT
RLTEHAVILSDGTELPADVVVYATGYGSMNGFAADLISQDIADKVGKVWGLGSNTTKDPGPWEGEQRNMWKPTQQEGLWF
HGGNLHQSRHYSQFLALQLKARMEGIPTPVYGLQPVHHLK
>Mature_600_residues
MLDTAPNGKVTTLLALLDDALSANDPDRALELFQTDCYWRDLVAFTWNIKTMEGKDQVRDMLGARLNDTRPSNWRIADGE
DATEADGVVESWIQFDTAVARGFGHLRLKDGRIWTLLTTMAELKGFEEPLGFDRPMGARHGVDPTRKTWKEERDAETAEL
GISRQPYCVIIGGGQGGIGLAARLRQLGVPTIIIEKNERPGDSWRKRYKSLCLHDPVWYDHLPYLPFPPNWPVFAPKDKI
GDWLEMYAKVMELNYWGSTVCKRASYDDAKQQWTVVVERDGQEITLTPKQLVLATGMSAKPNLPSFEGMDLFKGDQHHSS
QHPGPDAYKGKKAVVIGSNNSAHDICAALWEAGADVTMVQRSSTHVVKSDSLMELGLSALYSEQAVRNGMTTAKADLIFA
SLPYKILHEFQIPVYNAIREGDADFYKRLEAAGFMLDYGDDESGLFMKYLRRGSGYYIDVGACDLIADGRIKLKSNVGVT
RLTEHAVILSDGTELPADVVVYATGYGSMNGFAADLISQDIADKVGKVWGLGSNTTKDPGPWEGEQRNMWKPTQQEGLWF
HGGNLHQSRHYSQFLALQLKARMEGIPTPVYGLQPVHHLK

Specific function: Unknown

COG id: COG2072

COG function: function code P; Predicted flavoprotein involved in K+ transport

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI4503759, Length=356, Percent_Identity=25, Blast_Score=87, Evalue=5e-17,
Organism=Homo sapiens, GI4503757, Length=219, Percent_Identity=26.9406392694064, Blast_Score=86, Evalue=1e-16,
Organism=Homo sapiens, GI4503755, Length=193, Percent_Identity=27.979274611399, Blast_Score=80, Evalue=4e-15,
Organism=Homo sapiens, GI221316672, Length=368, Percent_Identity=24.1847826086957, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI221316674, Length=368, Percent_Identity=24.1847826086957, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI50541965, Length=305, Percent_Identity=25.2459016393443, Blast_Score=74, Evalue=5e-13,
Organism=Homo sapiens, GI50541961, Length=305, Percent_Identity=25.2459016393443, Blast_Score=74, Evalue=5e-13,
Organism=Homo sapiens, GI221316678, Length=209, Percent_Identity=26.3157894736842, Blast_Score=70, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013027
- InterPro:   IPR000103 [H]

Pfam domain/function: PF07992 Pyr_redox_2 [H]

EC number: NA

Molecular weight: Translated: 66887; Mature: 66887

Theoretical pI: Translated: 5.99; Mature: 5.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDTAPNGKVTTLLALLDDALSANDPDRALELFQTDCYWRDLVAFTWNIKTMEGKDQVRD
CCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHEEEEEEEEEEECCCHHHHHH
MLGARLNDTRPSNWRIADGEDATEADGVVESWIQFDTAVARGFGHLRLKDGRIWTLLTTM
HHCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEHHHHHH
AELKGFEEPLGFDRPMGARHGVDPTRKTWKEERDAETAELGISRQPYCVIIGGGQGGIGL
HHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHCCCCCCEEEEEECCCCCHHH
AARLRQLGVPTIIIEKNERPGDSWRKRYKSLCLHDPVWYDHLPYLPFPPNWPVFAPKDKI
HHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHH
GDWLEMYAKVMELNYWGSTVCKRASYDDAKQQWTVVVERDGQEITLTPKQLVLATGMSAK
HHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEEEECCCCEEEECHHHHHEECCCCCC
PNLPSFEGMDLFKGDQHHSSQHPGPDAYKGKKAVVIGSNNSAHDICAALWEAGADVTMVQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEE
RSSTHVVKSDSLMELGLSALYSEQAVRNGMTTAKADLIFASLPYKILHEFQIPVYNAIRE
CCCCEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHEEEECCCHHHHHHHCCCHHHHHHC
GDADFYKRLEAAGFMLDYGDDESGLFMKYLRRGSGYYIDVGACDLIADGRIKLKSNVGVT
CCHHHHHHHHHCCEEEECCCCCCHHHHHHHHCCCCCEEECCCEEEEECCEEEEECCCCEE
RLTEHAVILSDGTELPADVVVYATGYGSMNGFAADLISQDIADKVGKVWGLGSNTTKDPG
EEECCEEEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCC
PWEGEQRNMWKPTQQEGLWFHGGNLHQSRHYSQFLALQLKARMEGIPTPVYGLQPVHHLK
CCCCCCCCCCCCHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCC
>Mature Secondary Structure
MLDTAPNGKVTTLLALLDDALSANDPDRALELFQTDCYWRDLVAFTWNIKTMEGKDQVRD
CCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHEEEEEEEEEEECCCHHHHHH
MLGARLNDTRPSNWRIADGEDATEADGVVESWIQFDTAVARGFGHLRLKDGRIWTLLTTM
HHCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEHHHHHH
AELKGFEEPLGFDRPMGARHGVDPTRKTWKEERDAETAELGISRQPYCVIIGGGQGGIGL
HHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHCCCCCCEEEEEECCCCCHHH
AARLRQLGVPTIIIEKNERPGDSWRKRYKSLCLHDPVWYDHLPYLPFPPNWPVFAPKDKI
HHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHH
GDWLEMYAKVMELNYWGSTVCKRASYDDAKQQWTVVVERDGQEITLTPKQLVLATGMSAK
HHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEEEECCCCEEEECHHHHHEECCCCCC
PNLPSFEGMDLFKGDQHHSSQHPGPDAYKGKKAVVIGSNNSAHDICAALWEAGADVTMVQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEE
RSSTHVVKSDSLMELGLSALYSEQAVRNGMTTAKADLIFASLPYKILHEFQIPVYNAIRE
CCCCEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHEEEECCCHHHHHHHCCCHHHHHHC
GDADFYKRLEAAGFMLDYGDDESGLFMKYLRRGSGYYIDVGACDLIADGRIKLKSNVGVT
CCHHHHHHHHHCCEEEECCCCCCHHHHHHHHCCCCCEEECCCEEEEECCEEEEECCCCEE
RLTEHAVILSDGTELPADVVVYATGYGSMNGFAADLISQDIADKVGKVWGLGSNTTKDPG
EEECCEEEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCC
PWEGEQRNMWKPTQQEGLWFHGGNLHQSRHYSQFLALQLKARMEGIPTPVYGLQPVHHLK
CCCCCCCCCCCCHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA