| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86750262
Identifier: 86750262
GI number: 86750262
Start: 3605077
End: 3605658
Strand: Direct
Name: 86750262
Synonym: RPB_3151
Alternate gene names: NA
Gene position: 3605077-3605658 (Clockwise)
Preceding gene: 86750261
Following gene: 86750263
Centisome position: 67.62
GC content: 67.01
Gene sequence:
>582_bases ATGCCGACCAAGATCTTCCTCGCGATCATCCTCGCCGCGGCCGTCGTCGTAGCCGCGATCGTGCTGCGCGAGCGAGGCGA GGACAAGGCGGCGCTCGAGGCGCAGGCGCAAGCCTTGATCAAGGACTTCGGCGGATCGTTGCTCAACGCGCTCAAGGGTT CGATCGAGAGTTCGGGGCCGGTCGAGGCGGTGGCGTTCTGCAACAAGGAAGCGCCGGGCATTGCCGAGCAGGCGTCGCGC CAGAGCGGATGGCAGATTTCCCGCACCAGCCTGAAGCCGCGCAATGCGGCGGCGGCGCCGGACGATTTCGAGCGCAAGGC GATGTCGGAGTTCGTCGGCCGCATCGCCGCCGGCGAGCCGGTCGCCTCGCTTCGCCATGCCGAAATCGTCGAGAACAACG GCCGACGCAACTTCCGTTACGTTCAGGCGATCCCGACCGGCGAACTTTGTCTCGGCTGCCACGGCGGCGCCATCAAGCCG GACGTCGCCGCGAAAATCCGCGCACTCTACCCGGCCGATCAGGCCACCGGCTTCAAGCCTGGCGACATGCGCGGCGCCTT CACGCTCAGCAAACCGCTGTAA
Upstream 100 bases:
>100_bases TGGCGGACACAGCCGCCAGCGGTGACTTCGTCACAGACGCTGTGCGGCCCCTGTCCTAACGCTCCAGTGGTATCGTTGAT TCACTCACAGCGGATCCGTC
Downstream 100 bases:
>100_bases CGCCACTGACGCCACTGATCTCTGCAAACGCGTCGCTTTCGCCACTGGCGACGCCACGCGAGCGGGCCCCTCCCGCTTCC GCCGCGGATGGCTGTCACCG
Product: hypothetical protein
Products: NA
Alternate protein names: Cytochrome C Fa
Number of amino acids: Translated: 193; Mature: 192
Protein sequence:
>193_residues MPTKIFLAIILAAAVVVAAIVLRERGEDKAALEAQAQALIKDFGGSLLNALKGSIESSGPVEAVAFCNKEAPGIAEQASR QSGWQISRTSLKPRNAAAAPDDFERKAMSEFVGRIAAGEPVASLRHAEIVENNGRRNFRYVQAIPTGELCLGCHGGAIKP DVAAKIRALYPADQATGFKPGDMRGAFTLSKPL
Sequences:
>Translated_193_residues MPTKIFLAIILAAAVVVAAIVLRERGEDKAALEAQAQALIKDFGGSLLNALKGSIESSGPVEAVAFCNKEAPGIAEQASR QSGWQISRTSLKPRNAAAAPDDFERKAMSEFVGRIAAGEPVASLRHAEIVENNGRRNFRYVQAIPTGELCLGCHGGAIKP DVAAKIRALYPADQATGFKPGDMRGAFTLSKPL >Mature_192_residues PTKIFLAIILAAAVVVAAIVLRERGEDKAALEAQAQALIKDFGGSLLNALKGSIESSGPVEAVAFCNKEAPGIAEQASRQ SGWQISRTSLKPRNAAAAPDDFERKAMSEFVGRIAAGEPVASLRHAEIVENNGRRNFRYVQAIPTGELCLGCHGGAIKPD VAAKIRALYPADQATGFKPGDMRGAFTLSKPL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20369; Mature: 20237
Theoretical pI: Translated: 9.29; Mature: 9.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTKIFLAIILAAAVVVAAIVLRERGEDKAALEAQAQALIKDFGGSLLNALKGSIESSGP CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC VEAVAFCNKEAPGIAEQASRQSGWQISRTSLKPRNAAAAPDDFERKAMSEFVGRIAAGEP CHHHHHCCCCCCCHHHHHHHHCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCH VASLRHAEIVENNGRRNFRYVQAIPTGELCLGCHGGAIKPDVAAKIRALYPADQATGFKP HHHHHHHHHHHCCCCCCEEEEEECCCCCEEEECCCCCCCCHHHHHHHHHCCCHHCCCCCC GDMRGAFTLSKPL CCCCCEEECCCCC >Mature Secondary Structure PTKIFLAIILAAAVVVAAIVLRERGEDKAALEAQAQALIKDFGGSLLNALKGSIESSGP CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC VEAVAFCNKEAPGIAEQASRQSGWQISRTSLKPRNAAAAPDDFERKAMSEFVGRIAAGEP CHHHHHCCCCCCCHHHHHHHHCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCH VASLRHAEIVENNGRRNFRYVQAIPTGELCLGCHGGAIKPDVAAKIRALYPADQATGFKP HHHHHHHHHHHCCCCCCEEEEEECCCCCEEEECCCCCCCCHHHHHHHHHCCCHHCCCCCC GDMRGAFTLSKPL CCCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA