| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86750168
Identifier: 86750168
GI number: 86750168
Start: 3479011
End: 3479445
Strand: Direct
Name: 86750168
Synonym: RPB_3051
Alternate gene names: NA
Gene position: 3479011-3479445 (Clockwise)
Preceding gene: 86750167
Following gene: 86750174
Centisome position: 65.25
GC content: 66.9
Gene sequence:
>435_bases ATGACCGTCGCCCCGCATATCCTGCGGCGGTACGTGCTCGACCGAGCCGCCGGACGCATGCCCCGCCCGGAATGGTCATA CTACGCGCCGGACATTGGCGCTTGGATCCTCGCTGTCGAGGCGTCCGCGCGACGTTACGAGCATCACCGGCGAGTCCGGA TCGACGGGGTACCGTGGTGCGACGTCCTCGGTCATCGCACTGAGGTGGCGGACGACCTGCAATTGCAGACGTATTTTCTC ACAATCGCGTCGGATGGCTGGTCTCGCCTCGCGATCGAGGTCATGCAGCATCCGACCCGCTGCCTGAAGTCCTGGCGCGC CGCCGGCGCGCTCATCCTCGCCGCCGTCGATCCGAACACGGAGGCTTTCGGAGGACCACTATCCGACTGGCCGGAGTCTC GCGGCACCGGTCCGCGCAGCATGCTGCCGCGTTGA
Upstream 100 bases:
>100_bases AGTCTGAACTCGAGGAATACGAGCGCACCGGCCGCACGTTCACGCCGCCGAAGCCGCGTCGCGATGATCGCGACCGCAAC GCCGCGCACACGTATTCGCA
Downstream 100 bases:
>100_bases TCTGATGGGTTCGTTTTCGGGATGAGCAATCATCCACGCCCCCCTCGTGGAGGCCAAGAAACACAAGCGCAAATGCTTCG AATTGTGGCAGGCTTCCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MTVAPHILRRYVLDRAAGRMPRPEWSYYAPDIGAWILAVEASARRYEHHRRVRIDGVPWCDVLGHRTEVADDLQLQTYFL TIASDGWSRLAIEVMQHPTRCLKSWRAAGALILAAVDPNTEAFGGPLSDWPESRGTGPRSMLPR
Sequences:
>Translated_144_residues MTVAPHILRRYVLDRAAGRMPRPEWSYYAPDIGAWILAVEASARRYEHHRRVRIDGVPWCDVLGHRTEVADDLQLQTYFL TIASDGWSRLAIEVMQHPTRCLKSWRAAGALILAAVDPNTEAFGGPLSDWPESRGTGPRSMLPR >Mature_143_residues TVAPHILRRYVLDRAAGRMPRPEWSYYAPDIGAWILAVEASARRYEHHRRVRIDGVPWCDVLGHRTEVADDLQLQTYFLT IASDGWSRLAIEVMQHPTRCLKSWRAAGALILAAVDPNTEAFGGPLSDWPESRGTGPRSMLPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16291; Mature: 16160
Theoretical pI: Translated: 8.72; Mature: 8.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVAPHILRRYVLDRAAGRMPRPEWSYYAPDIGAWILAVEASARRYEHHRRVRIDGVPWC CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHCEEEECCCCHH DVLGHRTEVADDLQLQTYFLTIASDGWSRLAIEVMQHPTRCLKSWRAAGALILAAVDPNT HHHCCCHHHHCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCC EAFGGPLSDWPESRGTGPRSMLPR CCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TVAPHILRRYVLDRAAGRMPRPEWSYYAPDIGAWILAVEASARRYEHHRRVRIDGVPWC CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHCEEEECCCCHH DVLGHRTEVADDLQLQTYFLTIASDGWSRLAIEVMQHPTRCLKSWRAAGALILAAVDPNT HHHCCCHHHHCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCC EAFGGPLSDWPESRGTGPRSMLPR CCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA