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The map label for this gene is 86750167

Identifier: 86750167

GI number: 86750167

Start: 3476888

End: 3479014

Strand: Direct

Name: 86750167

Synonym: RPB_3050

Alternate gene names: NA

Gene position: 3476888-3479014 (Clockwise)

Preceding gene: 86750166

Following gene: 86750168

Centisome position: 65.21

GC content: 62.06

Gene sequence:

>2127_bases
GTGATCGCAGGCGCAACCCGAGGTTCCGGCGGCCCCGCCCTTGCTCGACATCTCATGTCCCGCAAAGGCGGCCAAACGGT
TGAAGTCATGCCCGCACGCGGGCTGGCGGCGGAGCATCTGCGCGATCAGCTTCGGGAGCTTGTAGCGTCATCCGCTCACG
GCCGGACGGATCGTCCGGTGCACCACGTGCATATCGATCCTCCGCCGGACTGCTCCGATCCGGACGCGGTTATCGCGACA
TTTCTCGATCGTTACGAAGCCGAATTCGGGCTACAAAACTCGCAGCGCGCGGGTGTTTATCACGTCAAGGCCGGTCGCAA
ACACGCTCACGTCGTCTGGTCTCTCGTTCGTGACGACGGCTCCGTTGTCTCGCTCGCGCACGATCACGCGCGAAGAGAAA
AAGTCAGCAGAATCGTGGAGTTTGAATGCGGTTTGCCGTTCACGAAGGGCAAACACAATCGCAGTGCGGCGGCAGCGCTC
CTGAAAGAGGGCCGCGCCGACGTTTCCGACGCAATGCTTGCTGCCGGTTTGCTCGATGGTCGCCGACCGGTGGCGCATTC
GACGCCGCGCCAACGCGCCCAAGCCGAGCGCACTGCCGTGCCGCTCGACGAAATCCGGACGCAAGCTCTCGCAGCGTGGC
AAGCATCGGACGACGCGCGGTCGTTCGCCGTCGCGCTCCACTCCTTTGATTTTTCGGTCGCGACCGGCGAGAGCGGCTAC
GTCCTGATCGACCGGTCCGGGAGCGTGCATAGCCTGAATCGCGTCCTCGCTGCAGCTGCACGTGCAGAAGGCGTGGAAAA
GATCACCTCCGCGGCTGTCCGCTCACGCTTGCGCGGCATCAACTTTCAAAATGTGGAGGAAGCCAAAAATGCCCGATCAG
AACGACGCAATACTAACTCAGGCGACCGGCGCGCGGGAGGCATCGGAGCGCCTGTTACCGCTCCTGAGCCTCCTCGACGA
GCAGACCGGCGAGACGAGCCCGTTGGACGAGCTCAAGGGCTTGTTGCAGGCGATCGTCGAGATTTTGGGTCATCACACGA
GCGCGTTGCAGCGGCTCGAAAGCGCATCCGTGACCACGCCGCCGCGCAACGCATAGGCGACATCGATCTGCAAGACTTAA
TTCGTAACAAGGGGGAAGTGATGGCAAAGATAAGAGCTCAGAACTTTAAGGCGAAAATCCTCGCAGAAGTCGCCCCCGCG
GGGTTCAACGCGCATGCATTTTCCGATGATCTGCGCATGATTCAGAAACCGACGCCCGCGCGACCGGCGGCTCGGATTAT
GATGATCGATGGCGGCTGGCTTGAGTACGATGCAGCCGGGCGTAGCATCCGAACATGGGGTCCCACCGGCCGCGCGCAAA
TACTCGCCGCCGCGCTCGCCGATAAGCTCGGCGTCGAGCCGGAGCATCTGGCGAAAACCGCATCAGTCGGAGCCGATGTC
GACGCTCTGAAAGTGACAAAAGTGTCGGAAGACACAGTCAACTCGCTGGTTTTGTGGTGGACCGCTCGTGGCTATTCGGC
GACCGACGGCCCAGACGGATGCTGGGTCACGGCAGGCTACGCTCGCATCCGAGACACTGGCGATCAGCTTGAGATTCACG
GCGGCCTGACGGTCAAAGTCATCGATGCAACGATCCTGAAAGCAAAGGAAGCTTGGGGCGGCGGCGTGTATCTCGACGGC
GACTGGACTCAAGATGAGCAAGATAAGCTCTGGATCGCCGCCCAGCGCGCGGGCGTAAAAGTCGAAAATTGCCAGCCGTC
GCTGTCGATTCAAGATGCGTGGCAGCGGGAGCAAGCCGCATCCGCGAAATCCATAAAAACGATTTGCGCCGCGCGATCCG
CAATCGCAGAAGCTACAGACGTTCGCGATGCCGCCGCCGGTGATCTCGAAGCTATGCACCGGCTTCCGCAGCCGTTGCAG
GCCTTCGTCGTCTCACACCTCGACGACGATCAGCGCAGGCATCTGTCTGGGCAGTCCGTCGCCGACATCACCGCCGCCTT
GCCGCGCTTCCGCGACCTCGGTCAGTCTGAACTCGAGGAATACGAGCGCACCGGCCGCACGTTCACGCCGCCGAAGCCGC
GTCGCGATGATCGCGACCGCAACGCCGCGCACACGTATTCGCAATGA

Upstream 100 bases:

>100_bases
CGGAGCATGAGACGACTGAGACGATTCTGCGCGATTTGCGCGCAACGCAGGCCGATCTGGTCAGCGTCGTCGATCGTCTC
CGAGCGGCAGAGGCGACCGA

Downstream 100 bases:

>100_bases
CCGTCGCCCCGCATATCCTGCGGCGGTACGTGCTCGACCGAGCCGCCGGACGCATGCCCCGCCCGGAATGGTCATACTAC
GCGCCGGACATTGGCGCTTG

Product: hypothetical protein

Products: NA

Alternate protein names: Relaxase/Mobilization Nuclease Domain-Containing Protein; Relaxase/Mobilization Nuclease Domain Protein; Ti-Type Conjugative Transfer Relaxase; MobA/MobL Protein

Number of amino acids: Translated: 708; Mature: 708

Protein sequence:

>708_residues
MIAGATRGSGGPALARHLMSRKGGQTVEVMPARGLAAEHLRDQLRELVASSAHGRTDRPVHHVHIDPPPDCSDPDAVIAT
FLDRYEAEFGLQNSQRAGVYHVKAGRKHAHVVWSLVRDDGSVVSLAHDHARREKVSRIVEFECGLPFTKGKHNRSAAAAL
LKEGRADVSDAMLAAGLLDGRRPVAHSTPRQRAQAERTAVPLDEIRTQALAAWQASDDARSFAVALHSFDFSVATGESGY
VLIDRSGSVHSLNRVLAAAARAEGVEKITSAAVRSRLRGINFQNVEEAKNARSERRNTNSGDRRAGGIGAPVTAPEPPRR
ADRRDEPVGRAQGLVAGDRRDFGSSHERVAAARKRIRDHAAAQRIGDIDLQDLIRNKGEVMAKIRAQNFKAKILAEVAPA
GFNAHAFSDDLRMIQKPTPARPAARIMMIDGGWLEYDAAGRSIRTWGPTGRAQILAAALADKLGVEPEHLAKTASVGADV
DALKVTKVSEDTVNSLVLWWTARGYSATDGPDGCWVTAGYARIRDTGDQLEIHGGLTVKVIDATILKAKEAWGGGVYLDG
DWTQDEQDKLWIAAQRAGVKVENCQPSLSIQDAWQREQAASAKSIKTICAARSAIAEATDVRDAAAGDLEAMHRLPQPLQ
AFVVSHLDDDQRRHLSGQSVADITAALPRFRDLGQSELEEYERTGRTFTPPKPRRDDRDRNAAHTYSQ

Sequences:

>Translated_708_residues
MIAGATRGSGGPALARHLMSRKGGQTVEVMPARGLAAEHLRDQLRELVASSAHGRTDRPVHHVHIDPPPDCSDPDAVIAT
FLDRYEAEFGLQNSQRAGVYHVKAGRKHAHVVWSLVRDDGSVVSLAHDHARREKVSRIVEFECGLPFTKGKHNRSAAAAL
LKEGRADVSDAMLAAGLLDGRRPVAHSTPRQRAQAERTAVPLDEIRTQALAAWQASDDARSFAVALHSFDFSVATGESGY
VLIDRSGSVHSLNRVLAAAARAEGVEKITSAAVRSRLRGINFQNVEEAKNARSERRNTNSGDRRAGGIGAPVTAPEPPRR
ADRRDEPVGRAQGLVAGDRRDFGSSHERVAAARKRIRDHAAAQRIGDIDLQDLIRNKGEVMAKIRAQNFKAKILAEVAPA
GFNAHAFSDDLRMIQKPTPARPAARIMMIDGGWLEYDAAGRSIRTWGPTGRAQILAAALADKLGVEPEHLAKTASVGADV
DALKVTKVSEDTVNSLVLWWTARGYSATDGPDGCWVTAGYARIRDTGDQLEIHGGLTVKVIDATILKAKEAWGGGVYLDG
DWTQDEQDKLWIAAQRAGVKVENCQPSLSIQDAWQREQAASAKSIKTICAARSAIAEATDVRDAAAGDLEAMHRLPQPLQ
AFVVSHLDDDQRRHLSGQSVADITAALPRFRDLGQSELEEYERTGRTFTPPKPRRDDRDRNAAHTYSQ
>Mature_708_residues
MIAGATRGSGGPALARHLMSRKGGQTVEVMPARGLAAEHLRDQLRELVASSAHGRTDRPVHHVHIDPPPDCSDPDAVIAT
FLDRYEAEFGLQNSQRAGVYHVKAGRKHAHVVWSLVRDDGSVVSLAHDHARREKVSRIVEFECGLPFTKGKHNRSAAAAL
LKEGRADVSDAMLAAGLLDGRRPVAHSTPRQRAQAERTAVPLDEIRTQALAAWQASDDARSFAVALHSFDFSVATGESGY
VLIDRSGSVHSLNRVLAAAARAEGVEKITSAAVRSRLRGINFQNVEEAKNARSERRNTNSGDRRAGGIGAPVTAPEPPRR
ADRRDEPVGRAQGLVAGDRRDFGSSHERVAAARKRIRDHAAAQRIGDIDLQDLIRNKGEVMAKIRAQNFKAKILAEVAPA
GFNAHAFSDDLRMIQKPTPARPAARIMMIDGGWLEYDAAGRSIRTWGPTGRAQILAAALADKLGVEPEHLAKTASVGADV
DALKVTKVSEDTVNSLVLWWTARGYSATDGPDGCWVTAGYARIRDTGDQLEIHGGLTVKVIDATILKAKEAWGGGVYLDG
DWTQDEQDKLWIAAQRAGVKVENCQPSLSIQDAWQREQAASAKSIKTICAARSAIAEATDVRDAAAGDLEAMHRLPQPLQ
AFVVSHLDDDQRRHLSGQSVADITAALPRFRDLGQSELEEYERTGRTFTPPKPRRDDRDRNAAHTYSQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 76875; Mature: 76875

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAGATRGSGGPALARHLMSRKGGQTVEVMPARGLAAEHLRDQLRELVASSAHGRTDRPV
CCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCE
HHVHIDPPPDCSDPDAVIATFLDRYEAEFGLQNSQRAGVYHVKAGRKHAHVVWSLVRDDG
EEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHCCC
SVVSLAHDHARREKVSRIVEFECGLPFTKGKHNRSAAAALLKEGRADVSDAMLAAGLLDG
CEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCC
RRPVAHSTPRQRAQAERTAVPLDEIRTQALAAWQASDDARSFAVALHSFDFSVATGESGY
CCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEEECCCCE
VLIDRSGSVHSLNRVLAAAARAEGVEKITSAAVRSRLRGINFQNVEEAKNARSERRNTNS
EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCC
GDRRAGGIGAPVTAPEPPRRADRRDEPVGRAQGLVAGDRRDFGSSHERVAAARKRIRDHA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
AAQRIGDIDLQDLIRNKGEVMAKIRAQNFKAKILAEVAPAGFNAHAFSDDLRMIQKPTPA
HHHHHCCCCHHHHHCCCHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCC
RPAARIMMIDGGWLEYDAAGRSIRTWGPTGRAQILAAALADKLGVEPEHLAKTASVGADV
CCCEEEEEEECCEEEECCCCCEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCC
DALKVTKVSEDTVNSLVLWWTARGYSATDGPDGCWVTAGYARIRDTGDQLEIHGGLTVKV
CCEEEEECCHHHHCCEEEEEEECCCCCCCCCCCCEEECCHHHHCCCCCEEEEECCCEEEE
IDATILKAKEAWGGGVYLDGDWTQDEQDKLWIAAQRAGVKVENCQPSLSIQDAWQREQAA
EHHHHHHHHHCCCCCEEECCCCCCCCCCCEEEEEHHCCCEEECCCCCCCHHHHHHHHHHH
SAKSIKTICAARSAIAEATDVRDAAAGDLEAMHRLPQPLQAFVVSHLDDDQRRHLSGQSV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHCCCHHHHHCCCCHH
ADITAALPRFRDLGQSELEEYERTGRTFTPPKPRRDDRDRNAAHTYSQ
HHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIAGATRGSGGPALARHLMSRKGGQTVEVMPARGLAAEHLRDQLRELVASSAHGRTDRPV
CCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCE
HHVHIDPPPDCSDPDAVIATFLDRYEAEFGLQNSQRAGVYHVKAGRKHAHVVWSLVRDDG
EEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHCCC
SVVSLAHDHARREKVSRIVEFECGLPFTKGKHNRSAAAALLKEGRADVSDAMLAAGLLDG
CEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCC
RRPVAHSTPRQRAQAERTAVPLDEIRTQALAAWQASDDARSFAVALHSFDFSVATGESGY
CCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEEECCCCE
VLIDRSGSVHSLNRVLAAAARAEGVEKITSAAVRSRLRGINFQNVEEAKNARSERRNTNS
EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCC
GDRRAGGIGAPVTAPEPPRRADRRDEPVGRAQGLVAGDRRDFGSSHERVAAARKRIRDHA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
AAQRIGDIDLQDLIRNKGEVMAKIRAQNFKAKILAEVAPAGFNAHAFSDDLRMIQKPTPA
HHHHHCCCCHHHHHCCCHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCC
RPAARIMMIDGGWLEYDAAGRSIRTWGPTGRAQILAAALADKLGVEPEHLAKTASVGADV
CCCEEEEEEECCEEEECCCCCEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCC
DALKVTKVSEDTVNSLVLWWTARGYSATDGPDGCWVTAGYARIRDTGDQLEIHGGLTVKV
CCEEEEECCHHHHCCEEEEEEECCCCCCCCCCCCEEECCHHHHCCCCCEEEEECCCEEEE
IDATILKAKEAWGGGVYLDGDWTQDEQDKLWIAAQRAGVKVENCQPSLSIQDAWQREQAA
EHHHHHHHHHCCCCCEEECCCCCCCCCCCEEEEEHHCCCEEECCCCCCCHHHHHHHHHHH
SAKSIKTICAARSAIAEATDVRDAAAGDLEAMHRLPQPLQAFVVSHLDDDQRRHLSGQSV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHCCCHHHHHCCCCHH
ADITAALPRFRDLGQSELEEYERTGRTFTPPKPRRDDRDRNAAHTYSQ
HHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA