Click here to switch to the map view.

The map label for this gene is 86750157

Identifier: 86750157

GI number: 86750157

Start: 3466265

End: 3466606

Strand: Direct

Name: 86750157

Synonym: RPB_3040

Alternate gene names: NA

Gene position: 3466265-3466606 (Clockwise)

Preceding gene: 86750156

Following gene: 86750158

Centisome position: 65.01

GC content: 63.16

Gene sequence:

>342_bases
ATGACGAATTGTCTCAGGGGCTTTTACACGGCGGAATTTGAAACGGCCCGGAAGAAGGCGCACGGGGTCGTCATGTTGCA
GGATGGCCAGATCCGCGGCGGAGATTCCAGCTTCGCCTATGTCGGCTCCTATACCCAGGACGGCGCCCGCGTGTTCGGCA
ATCTGCGCGGCACCCGTCACGCCAACGCCGATCATCCCGATCACTACTCGGTGTTCGGCATCGATCCGGTCGACGTCGAT
TTCGACGGCGTCGCCAGCGACGGCTACGTCTCGATCGAGGGTTCCGCCCGAGAAACGCCGAGCCTGTCGATGCGCGCGCT
CCTCAAGCGCATCGGGGACTAG

Upstream 100 bases:

>100_bases
TGTGGCGCAGAGTGAAAAGTCGGAAGCGCACCGAGCGCATTAGCAAAGCCGTAAAGCTCCGGTGGTAGACAGCCGCATAT
TCATAGCGTGCGAGATTGAC

Downstream 100 bases:

>100_bases
GCCGCCCAGTATCGGCCTCCGGCGCCCCCGGGCGCCACGATCTGAAGCAGGTCCGCCGTGGTCTCCATCCCCGAAAAGCG
CAAATTCCCTCGCGTCGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 113; Mature: 112

Protein sequence:

>113_residues
MTNCLRGFYTAEFETARKKAHGVVMLQDGQIRGGDSSFAYVGSYTQDGARVFGNLRGTRHANADHPDHYSVFGIDPVDVD
FDGVASDGYVSIEGSARETPSLSMRALLKRIGD

Sequences:

>Translated_113_residues
MTNCLRGFYTAEFETARKKAHGVVMLQDGQIRGGDSSFAYVGSYTQDGARVFGNLRGTRHANADHPDHYSVFGIDPVDVD
FDGVASDGYVSIEGSARETPSLSMRALLKRIGD
>Mature_112_residues
TNCLRGFYTAEFETARKKAHGVVMLQDGQIRGGDSSFAYVGSYTQDGARVFGNLRGTRHANADHPDHYSVFGIDPVDVDF
DGVASDGYVSIEGSARETPSLSMRALLKRIGD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12277; Mature: 12145

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNCLRGFYTAEFETARKKAHGVVMLQDGQIRGGDSSFAYVGSYTQDGARVFGNLRGTRH
CCCCCCCEECCHHHHHHHHHCCEEEEECCEEECCCCCEEEECCCCCCCHHHHHCCCCCCC
ANADHPDHYSVFGIDPVDVDFDGVASDGYVSIEGSARETPSLSMRALLKRIGD
CCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
TNCLRGFYTAEFETARKKAHGVVMLQDGQIRGGDSSFAYVGSYTQDGARVFGNLRGTRH
CCCCCCEECCHHHHHHHHHCCEEEEECCEEECCCCCEEEECCCCCCCHHHHHCCCCCCC
ANADHPDHYSVFGIDPVDVDFDGVASDGYVSIEGSARETPSLSMRALLKRIGD
CCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA