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The map label for this gene is yhhG [C]

Identifier: 86750156

GI number: 86750156

Start: 3465675

End: 3466094

Strand: Direct

Name: yhhG [C]

Synonym: RPB_3039

Alternate gene names: 86750156

Gene position: 3465675-3466094 (Clockwise)

Preceding gene: 86750152

Following gene: 86750157

Centisome position: 65.0

GC content: 61.9

Gene sequence:

>420_bases
ATGCACCGCGTCACCGTCACGCTGGACGACGATCTGATGAAGAAGCTCGACGCCATCATCGAGGCCCGCGGCTACCAGAA
CCGCTCCGAGGCGATCCGCGATCTGGCGCGGATCGGAATTCAGCAGACCTCGGCGCACGCCAGTGCAGAACACTGCGTCG
GGGCGATGGTCTACACCTACGATCATTCCAAGCGCGATCTTCCGCGCAAGCTGACGCAGAGCTTCCACAATCACCACGAG
CTGTCGCGCGCGACCATGCACGTGCATCTCGATCACGACCAATGCCTCGAAGTCACCATCCTCGACGGCAAGGCGAACGA
GATTCAGCATTTTGCCGATCACATCTTTTCGGAACGCGGCGTGCGCTACGGCCGGCTGGTGACGATCCCCACAAGCGGCG
ACGGACACGCGCACGACTGA

Upstream 100 bases:

>100_bases
ATCTGCTATCGCAGGCGGTCCCGGCAGATCGCCCGAACTGGAAGCGTGGCACGGGCAGTATGACAATGTCAATAAATCTG
CATACCAATAGAGGCCTGCG

Downstream 100 bases:

>100_bases
CAGGCCCGGGTCGTCAGGCGCCCGAGCGCGAGCCGGCACCGTCGCGGCGATCAGCGCAGCCGCGCGACGCTGTGGCGCAG
AGTGAAAAGTCGGAAGCGCA

Product: nickel responsive regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MHRVTVTLDDDLMKKLDAIIEARGYQNRSEAIRDLARIGIQQTSAHASAEHCVGAMVYTYDHSKRDLPRKLTQSFHNHHE
LSRATMHVHLDHDQCLEVTILDGKANEIQHFADHIFSERGVRYGRLVTIPTSGDGHAHD

Sequences:

>Translated_139_residues
MHRVTVTLDDDLMKKLDAIIEARGYQNRSEAIRDLARIGIQQTSAHASAEHCVGAMVYTYDHSKRDLPRKLTQSFHNHHE
LSRATMHVHLDHDQCLEVTILDGKANEIQHFADHIFSERGVRYGRLVTIPTSGDGHAHD
>Mature_139_residues
MHRVTVTLDDDLMKKLDAIIEARGYQNRSEAIRDLARIGIQQTSAHASAEHCVGAMVYTYDHSKRDLPRKLTQSFHNHHE
LSRATMHVHLDHDQCLEVTILDGKANEIQHFADHIFSERGVRYGRLVTIPTSGDGHAHD

Specific function: Transcriptional regulator (Potential)

COG id: COG0864

COG function: function code K; Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transcriptional regulatory CopG/NikR family

Homologues:

Organism=Escherichia coli, GI1789892, Length=130, Percent_Identity=46.9230769230769, Blast_Score=116, Evalue=5e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NIKR_RHOP2 (Q2IVL9)

Other databases:

- EMBL:   CP000250
- RefSeq:   YP_486652.1
- STRING:   Q2IVL9
- GeneID:   3910839
- GenomeReviews:   CP000250_GR
- KEGG:   rpb:RPB_3039
- eggNOG:   COG0864
- HOGENOM:   HBG646378
- OMA:   CLEVLVV
- ProtClustDB:   PRK02967
- BioCyc:   RPAL316058:RPB_3039-MONOMER
- GO:   GO:0006350
- HAMAP:   MF_00476
- InterPro:   IPR013321
- InterPro:   IPR002145
- InterPro:   IPR022988
- InterPro:   IPR014160
- InterPro:   IPR010985
- InterPro:   IPR014864
- Gene3D:   G3DSA:1.10.1220.10
- Gene3D:   G3DSA:3.30.70.1150
- TIGRFAMs:   TIGR02793

Pfam domain/function: PF08753 NikR_C; PF01402 RHH_1; SSF47598 Met_repress_like

EC number: NA

Molecular weight: Translated: 15800; Mature: 15800

Theoretical pI: Translated: 6.89; Mature: 6.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRVTVTLDDDLMKKLDAIIEARGYQNRSEAIRDLARIGIQQTSAHASAEHCVGAMVYTY
CCEEEEEECHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHCCCCCCHHHHHHEEEEEE
DHSKRDLPRKLTQSFHNHHELSRATMHVHLDHDQCLEVTILDGKANEIQHFADHIFSERG
CCCCCCHHHHHHHHHHHHHHHHHEEEEEEECCCCEEEEEEECCCHHHHHHHHHHHHHHCC
VRYGRLVTIPTSGDGHAHD
CCCCEEEEEECCCCCCCCC
>Mature Secondary Structure
MHRVTVTLDDDLMKKLDAIIEARGYQNRSEAIRDLARIGIQQTSAHASAEHCVGAMVYTY
CCEEEEEECHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHCCCCCCHHHHHHEEEEEE
DHSKRDLPRKLTQSFHNHHELSRATMHVHLDHDQCLEVTILDGKANEIQHFADHIFSERG
CCCCCCHHHHHHHHHHHHHHHHHEEEEEEECCCCEEEEEEECCCHHHHHHHHHHHHHHCC
VRYGRLVTIPTSGDGHAHD
CCCCEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA