Definition | Rhodopseudomonas palustris HaA2, complete genome. |
---|---|
Accession | NC_007778 |
Length | 5,331,656 |
Click here to switch to the map view.
The map label for this gene is mltB [H]
Identifier: 86750075
GI number: 86750075
Start: 3367955
End: 3369181
Strand: Direct
Name: mltB [H]
Synonym: RPB_2958
Alternate gene names: 86750075
Gene position: 3367955-3369181 (Clockwise)
Preceding gene: 86750074
Following gene: 86750076
Centisome position: 63.17
GC content: 69.19
Gene sequence:
>1227_bases ATGGCCAGCTTCGATTCCCGCTTCACGCCGACCCGCCGCCGCCTGCTGCAAACCGCGCTCGGCGCGGCTGTGATGTGGCC GGCCATCGCGCGCGCCGCCCCGGCCGGCTTCGACGCGTGGCGCGACGGGTTCCGCAGCCGCGCGCTCGCCAAGGGCATCA CGCCGCAGACCTGGGACCGCGCGATGGCCCGGCTCGAGCCGGACATGAGCGTGTTCAAGAATTTCCAGAAGCAGCCCGAA TTCCACGAGCAGCTCTGGCAATACATCAACCGCCGCGTCTCCGACTGGCGCATCACCAACGGCCGCTTGGCGCTGCAGAA GACCGAGCCGCTGTTCGCCCGGATCGAGCGCGACTTCGGCGTCGAGCGCGGCACGCTGCTGGCGCTGTGGGGCGTCGAGA GCGCCTATGGCGATCCCTTGGTGCAGCAGAACCACATGCGGCCGGTGTTTCCCTCGCTCGCGGCGCTGGCCTGGAACGAG CCGCGCCGCAAAGCCTATTGGGAAACCGAACTGATCAACGCGCTCAGAATCGTCGATCGCGGCTGGTCGACGCCCGAGGA GATGCGCGGCTCCTGGGCCGGCGCGATGGGGCATACCCAATGGATGCCGGAAGTCTGGCTCAATGTCGGCATCGACTACG ACCGCGACGGTCGCGTCTCGCCGTTCGGCCGCCCCGACGACGCCCTCGGCTCCAGCGCAAAATATCTGGTCAATCGCGGC AAATATCGCCGCGGCGAGCATTGGGGCTACGAGGTCCGCGGGCCCGGCGGCGCGATCAGCGGCAGCCGTTCGTATCTCGC GTGGTCGCGCTCCGGCGTCAGCCGCGTCGACGGCGAGCCGTTTCCCGATCCGCAGGCGATGGCGCAGATGTGGGTGCCGG TCGCGGGCGGTCCGCAGTTTCTGCTGGGACCGAATTTCTACGCGGTGCGCAGCTACAACCCGTCGATGAACTACGCACTC GCGATCTGCCATCTCGGCGACCGCATCCTCGGCGCCGGCCCGTTCGCGAATCCGTTCCCGGGCTCGGAGCGGGCGATGAC GCTGGCCGAAGTGCAGGAGATGCAGACCCGGCTGACCCGCGCCGGCTTCGACACCGGCGGCACCGACGGCCGCGTCGGCA ACGATACGATGAAAGCGGTGCGCGATTATCAGGCGCGCGCCGGCATGCAGCCGGCCGACGGCTATGGCGGCCTCAAGCTG CTTGCGCGGCTGCGGCAGGGCCCGTAA
Upstream 100 bases:
>100_bases CACGCCCTGATCGTCGCCGCGGCTGCCGTTCTGCCCTGCCCGAGATCAATTGCTCGCGGGCCTCTGCCCCGCGCCGGCTT CAGCCGCTACACTGCGCCGT
Downstream 100 bases:
>100_bases GTCATTTCCGCAATGCGACATCATTGGACCTGGCACCGGGTGAAGGCGCTCGCGCACGAGGAGTGGCGCGCGCTGGTCAC CATCAATCCGAGCGACCGGC
Product: lytic murein transglycosylase
Products: Muramic Acid Residue [C]
Alternate protein names: 35 kDa soluble lytic transglycosylase; Murein hydrolase B; Slt35 [H]
Number of amino acids: Translated: 408; Mature: 407
Protein sequence:
>408_residues MASFDSRFTPTRRRLLQTALGAAVMWPAIARAAPAGFDAWRDGFRSRALAKGITPQTWDRAMARLEPDMSVFKNFQKQPE FHEQLWQYINRRVSDWRITNGRLALQKTEPLFARIERDFGVERGTLLALWGVESAYGDPLVQQNHMRPVFPSLAALAWNE PRRKAYWETELINALRIVDRGWSTPEEMRGSWAGAMGHTQWMPEVWLNVGIDYDRDGRVSPFGRPDDALGSSAKYLVNRG KYRRGEHWGYEVRGPGGAISGSRSYLAWSRSGVSRVDGEPFPDPQAMAQMWVPVAGGPQFLLGPNFYAVRSYNPSMNYAL AICHLGDRILGAGPFANPFPGSERAMTLAEVQEMQTRLTRAGFDTGGTDGRVGNDTMKAVRDYQARAGMQPADGYGGLKL LARLRQGP
Sequences:
>Translated_408_residues MASFDSRFTPTRRRLLQTALGAAVMWPAIARAAPAGFDAWRDGFRSRALAKGITPQTWDRAMARLEPDMSVFKNFQKQPE FHEQLWQYINRRVSDWRITNGRLALQKTEPLFARIERDFGVERGTLLALWGVESAYGDPLVQQNHMRPVFPSLAALAWNE PRRKAYWETELINALRIVDRGWSTPEEMRGSWAGAMGHTQWMPEVWLNVGIDYDRDGRVSPFGRPDDALGSSAKYLVNRG KYRRGEHWGYEVRGPGGAISGSRSYLAWSRSGVSRVDGEPFPDPQAMAQMWVPVAGGPQFLLGPNFYAVRSYNPSMNYAL AICHLGDRILGAGPFANPFPGSERAMTLAEVQEMQTRLTRAGFDTGGTDGRVGNDTMKAVRDYQARAGMQPADGYGGLKL LARLRQGP >Mature_407_residues ASFDSRFTPTRRRLLQTALGAAVMWPAIARAAPAGFDAWRDGFRSRALAKGITPQTWDRAMARLEPDMSVFKNFQKQPEF HEQLWQYINRRVSDWRITNGRLALQKTEPLFARIERDFGVERGTLLALWGVESAYGDPLVQQNHMRPVFPSLAALAWNEP RRKAYWETELINALRIVDRGWSTPEEMRGSWAGAMGHTQWMPEVWLNVGIDYDRDGRVSPFGRPDDALGSSAKYLVNRGK YRRGEHWGYEVRGPGGAISGSRSYLAWSRSGVSRVDGEPFPDPQAMAQMWVPVAGGPQFLLGPNFYAVRSYNPSMNYALA ICHLGDRILGAGPFANPFPGSERAMTLAEVQEMQTRLTRAGFDTGGTDGRVGNDTMKAVRDYQARAGMQPADGYGGLKLL ARLRQGP
Specific function: Murein-degrading enzyme. Catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N- acetylglucosamine residues in peptidoglycan. May play a role in recycling of muropeptides during cell elongation and/or cell division [H]
COG id: COG2951
COG function: function code M; Membrane-bound lytic murein transglycosylase B
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor; Periplasmic side [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789053, Length=245, Percent_Identity=27.3469387755102, Blast_Score=92, Evalue=7e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011757 [H]
Pfam domain/function: NA
EC number: 3.2.1.- [C]
Molecular weight: Translated: 45702; Mature: 45571
Theoretical pI: Translated: 10.18; Mature: 10.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASFDSRFTPTRRRLLQTALGAAVMWPAIARAAPAGFDAWRDGFRSRALAKGITPQTWDR CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHH AMARLEPDMSVFKNFQKQPEFHEQLWQYINRRVSDWRITNGRLALQKTEPLFARIERDFG HHHHCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEECCEEEEECCCHHHHHHHHHHC VERGTLLALWGVESAYGDPLVQQNHMRPVFPSLAALAWNEPRRKAYWETELINALRIVDR CCCCCEEEEECCCHHHCCCCHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC GWSTPEEMRGSWAGAMGHTQWMPEVWLNVGIDYDRDGRVSPFGRPDDALGSSAKYLVNRG CCCCHHHHCCCHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHCC KYRRGEHWGYEVRGPGGAISGSRSYLAWSRSGVSRVDGEPFPDPQAMAQMWVPVAGGPQF CCCCCCCCCEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCE LLGPNFYAVRSYNPSMNYALAICHLGDRILGAGPFANPFPGSERAMTLAEVQEMQTRLTR EECCCEEEEEECCCCCCCEEEEEHHCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH AGFDTGGTDGRVGNDTMKAVRDYQARAGMQPADGYGGLKLLARLRQGP HCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure ASFDSRFTPTRRRLLQTALGAAVMWPAIARAAPAGFDAWRDGFRSRALAKGITPQTWDR CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHH AMARLEPDMSVFKNFQKQPEFHEQLWQYINRRVSDWRITNGRLALQKTEPLFARIERDFG HHHHCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEECCEEEEECCCHHHHHHHHHHC VERGTLLALWGVESAYGDPLVQQNHMRPVFPSLAALAWNEPRRKAYWETELINALRIVDR CCCCCEEEEECCCHHHCCCCHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC GWSTPEEMRGSWAGAMGHTQWMPEVWLNVGIDYDRDGRVSPFGRPDDALGSSAKYLVNRG CCCCHHHHCCCHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHCC KYRRGEHWGYEVRGPGGAISGSRSYLAWSRSGVSRVDGEPFPDPQAMAQMWVPVAGGPQF CCCCCCCCCEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCE LLGPNFYAVRSYNPSMNYALAICHLGDRILGAGPFANPFPGSERAMTLAEVQEMQTRLTR EECCCEEEEEECCCCCCCEEEEEHHCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH AGFDTGGTDGRVGNDTMKAVRDYQARAGMQPADGYGGLKLLARLRQGP HCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Muramic Acid Residue (N-Acetylmuramic Acid And N-Acetylglucosamine Residues) [C]
Specific reaction: Cleavage Of The Beta-1,4-Glycosidic Bond [C]
General reaction: Cleavage Bond [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7476170; 7789526; 9205837; 9278503; 3553176; 9761817; 10570954; 10545329; 10684641 [H]