Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

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The map label for this gene is 86750074

Identifier: 86750074

GI number: 86750074

Start: 3366242

End: 3367864

Strand: Direct

Name: 86750074

Synonym: RPB_2957

Alternate gene names: NA

Gene position: 3366242-3367864 (Clockwise)

Preceding gene: 86750073

Following gene: 86750075

Centisome position: 63.14

GC content: 70.06

Gene sequence:

>1623_bases
TTGAGATCGGGATCGATCGGCCGGACATTGCTGCGGCGGGTGCGCGGGCTGCCGCTGCTGCTGATCGCCGCTCTCGTCGC
CGCTACGCCGGCCGCCGCAGACGACTTCCGCACCCCCAATGTGACCACGCTGCGGGCCGACTGGGGCGCGGCGCTGAACC
AGTTGCGCTCCGAACTGGCCGGCACGCCCGCCGTCGCCACCGAGTTCGTCTTCAGCGGCCGTCGCGGGCTTCCTGCCTAT
GATCCGCGCCGGATCCCGGCGCTGGTCCGGCTCAATGGCATCAGCGCCCGGTTCTTCCCCGGCATCGGCCGCAGCGCGGT
GCCGGTGCTGCTGCCGTTCGATATCGCCGCCCTGCTCGACGCCGATCCGAAGGCCGAACCGGATCCCGAATTGCTGGCGC
GGGTCCAGGTCGGCTTCCGCCCGGCCGAGATGTTCGACGCCGGCCCCTCCGGCTACGACGCGGTGTTCGCGCTCGCGCCC
GGCGGCGACGACATGCCGCCGCGGGTATTCGTCAGCCCCATCGAGGTGCAGATCACCGGGTCGAACCTAGTCTACGACAT
CGCCGACCCGTTCGGCGGCAGAGGCGAGCCGGTCAAGGCGCTGGCCGCGCAATATCCAGACCTGCGCCGCTTCATCCGCG
AAGGCTACGTGCGTTACGCCTTCACGCGGTTCGGCATTGCCTATGTGGTGTCGATCCAGTGCCTCGACTCGGTGCCGAAA
GCCAAGCGCCTCGCCTGCCGCGAAAGCTATCCGGTGGCCGAGCGTTTCCTGAAAGCGCTGCGGCTCGCCGGCGGCCGGCC
GTATCGCCCGCGCCGCGACATCGCGCCCGCGACCGCCGAGCGGCCGGCGGCGCCGTCGCCGGATTTCACCTATCGGGCAA
GTGGCGACATCATTGCCAATTCGGGCTTCCGCAAGCAGCAGGGCCGGCCCGATGCCACCGTTTACGCTCAGATGCGGTTT
CCGATCGAGCAGCCGCCGGCCTATGCGCGGTCGCAGTCCTATGTGCCGCACCGTCCCGCGGTCGGCGCGCACAGCCCCTA
TGCCTATCCGTGGCGGGACAATTTTTGCGAGAGCCGCAGCTTCGGCGTCGGCCAGTGCGCCACCGGCTTCGGCCATCAGG
GCCAGGACATCCGCCCCGGCGCCTGCCTGCCGGGCCAGGCCGATTGCGACGTCAAGCAGCAGGGCGTGGTCGCGGTCCGC
GACGGTGTGCTGATCCGTTCGCCGAAGCAGCAGGCGGTGACGCTGCAGGTCAACACCGGCCGCGAGCACATCCGCTTCCG
CTATATGCACATGTCGCCGACGGAACTCGACGCCGATGGCGTGCTCAACGGCCGCCGCGTCGATGAAGGCGAGCGCTTCG
GCGTGGTCGGCAATTATCTCGATCGCCCCAACGGCACCTCACGCCATCTGCATTTCGACGTCCAGGTGTTCACCCCGGAC
GGCTGGCTCTGGGTCAATCCCTACACCACGCTGGTCGCCGCCTATGAACGCCTGCTCGGCGGCCGCGGCCGGGAGGTCGC
GCCCGATGGACAGCCGGTGGAGAGCGAGGTCAGCGCCGCCTCCGAGGACGTGACCCGCGCCGCGGCGGCGCGCGCGGGCC
ATGATCCGGTCGACACGCCCTGA

Upstream 100 bases:

>100_bases
GGTACGGAGCCCACATGCGGCACCTGCGAACGCCCCGGGCTTGGCCGGCGGACGAAAACCCCGGTAGATTGCCTCCGAAC
TGCAGGAGGCGCGTCGCGTT

Downstream 100 bases:

>100_bases
TCGTCGCCGCGGCTGCCGTTCTGCCCTGCCCGAGATCAATTGCTCGCGGGCCTCTGCCCCGCGCCGGCTTCAGCCGCTAC
ACTGCGCCGTATGGCCAGCT

Product: peptidase M23B

Products: NA

Alternate protein names: Peptidase M; Membrane Peptidase; M23 Family Peptidase; Exported Peptidase

Number of amino acids: Translated: 540; Mature: 540

Protein sequence:

>540_residues
MRSGSIGRTLLRRVRGLPLLLIAALVAATPAAADDFRTPNVTTLRADWGAALNQLRSELAGTPAVATEFVFSGRRGLPAY
DPRRIPALVRLNGISARFFPGIGRSAVPVLLPFDIAALLDADPKAEPDPELLARVQVGFRPAEMFDAGPSGYDAVFALAP
GGDDMPPRVFVSPIEVQITGSNLVYDIADPFGGRGEPVKALAAQYPDLRRFIREGYVRYAFTRFGIAYVVSIQCLDSVPK
AKRLACRESYPVAERFLKALRLAGGRPYRPRRDIAPATAERPAAPSPDFTYRASGDIIANSGFRKQQGRPDATVYAQMRF
PIEQPPAYARSQSYVPHRPAVGAHSPYAYPWRDNFCESRSFGVGQCATGFGHQGQDIRPGACLPGQADCDVKQQGVVAVR
DGVLIRSPKQQAVTLQVNTGREHIRFRYMHMSPTELDADGVLNGRRVDEGERFGVVGNYLDRPNGTSRHLHFDVQVFTPD
GWLWVNPYTTLVAAYERLLGGRGREVAPDGQPVESEVSAASEDVTRAAAARAGHDPVDTP

Sequences:

>Translated_540_residues
MRSGSIGRTLLRRVRGLPLLLIAALVAATPAAADDFRTPNVTTLRADWGAALNQLRSELAGTPAVATEFVFSGRRGLPAY
DPRRIPALVRLNGISARFFPGIGRSAVPVLLPFDIAALLDADPKAEPDPELLARVQVGFRPAEMFDAGPSGYDAVFALAP
GGDDMPPRVFVSPIEVQITGSNLVYDIADPFGGRGEPVKALAAQYPDLRRFIREGYVRYAFTRFGIAYVVSIQCLDSVPK
AKRLACRESYPVAERFLKALRLAGGRPYRPRRDIAPATAERPAAPSPDFTYRASGDIIANSGFRKQQGRPDATVYAQMRF
PIEQPPAYARSQSYVPHRPAVGAHSPYAYPWRDNFCESRSFGVGQCATGFGHQGQDIRPGACLPGQADCDVKQQGVVAVR
DGVLIRSPKQQAVTLQVNTGREHIRFRYMHMSPTELDADGVLNGRRVDEGERFGVVGNYLDRPNGTSRHLHFDVQVFTPD
GWLWVNPYTTLVAAYERLLGGRGREVAPDGQPVESEVSAASEDVTRAAAARAGHDPVDTP
>Mature_540_residues
MRSGSIGRTLLRRVRGLPLLLIAALVAATPAAADDFRTPNVTTLRADWGAALNQLRSELAGTPAVATEFVFSGRRGLPAY
DPRRIPALVRLNGISARFFPGIGRSAVPVLLPFDIAALLDADPKAEPDPELLARVQVGFRPAEMFDAGPSGYDAVFALAP
GGDDMPPRVFVSPIEVQITGSNLVYDIADPFGGRGEPVKALAAQYPDLRRFIREGYVRYAFTRFGIAYVVSIQCLDSVPK
AKRLACRESYPVAERFLKALRLAGGRPYRPRRDIAPATAERPAAPSPDFTYRASGDIIANSGFRKQQGRPDATVYAQMRF
PIEQPPAYARSQSYVPHRPAVGAHSPYAYPWRDNFCESRSFGVGQCATGFGHQGQDIRPGACLPGQADCDVKQQGVVAVR
DGVLIRSPKQQAVTLQVNTGREHIRFRYMHMSPTELDADGVLNGRRVDEGERFGVVGNYLDRPNGTSRHLHFDVQVFTPD
GWLWVNPYTTLVAAYERLLGGRGREVAPDGQPVESEVSAASEDVTRAAAARAGHDPVDTP

Specific function: Unknown

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58802; Mature: 58802

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSGSIGRTLLRRVRGLPLLLIAALVAATPAAADDFRTPNVTTLRADWGAALNQLRSELA
CCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHC
GTPAVATEFVFSGRRGLPAYDPRRIPALVRLNGISARFFPGIGRSAVPVLLPFDIAALLD
CCCHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCEEECCCCCCCCCCEEECCHHHHHHC
ADPKAEPDPELLARVQVGFRPAEMFDAGPSGYDAVFALAPGGDDMPPRVFVSPIEVQITG
CCCCCCCCHHHHHHHHCCCCHHHHHCCCCCCCCEEEEECCCCCCCCCEEEECEEEEEEEC
SNLVYDIADPFGGRGEPVKALAAQYPDLRRFIREGYVRYAFTRFGIAYVVSIQCLDSVPK
CCEEEECCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCHHHHEEHHHHHCCCH
AKRLACRESYPVAERFLKALRLAGGRPYRPRRDIAPATAERPAAPSPDFTYRASGDIIAN
HHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEC
SGFRKQQGRPDATVYAQMRFPIEQPPAYARSQSYVPHRPAVGAHSPYAYPWRDNFCESRS
CCCHHCCCCCCCEEEEEEECCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
FGVGQCATGFGHQGQDIRPGACLPGQADCDVKQQGVVAVRDGVLIRSPKQQAVTLQVNTG
CCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCEEEECCCCCEEEEEEECC
REHIRFRYMHMSPTELDADGVLNGRRVDEGERFGVVGNYLDRPNGTSRHLHFDVQVFTPD
CCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCC
GWLWVNPYTTLVAAYERLLGGRGREVAPDGQPVESEVSAASEDVTRAAAARAGHDPVDTP
CEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MRSGSIGRTLLRRVRGLPLLLIAALVAATPAAADDFRTPNVTTLRADWGAALNQLRSELA
CCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHC
GTPAVATEFVFSGRRGLPAYDPRRIPALVRLNGISARFFPGIGRSAVPVLLPFDIAALLD
CCCHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCEEECCCCCCCCCCEEECCHHHHHHC
ADPKAEPDPELLARVQVGFRPAEMFDAGPSGYDAVFALAPGGDDMPPRVFVSPIEVQITG
CCCCCCCCHHHHHHHHCCCCHHHHHCCCCCCCCEEEEECCCCCCCCCEEEECEEEEEEEC
SNLVYDIADPFGGRGEPVKALAAQYPDLRRFIREGYVRYAFTRFGIAYVVSIQCLDSVPK
CCEEEECCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCHHHHEEHHHHHCCCH
AKRLACRESYPVAERFLKALRLAGGRPYRPRRDIAPATAERPAAPSPDFTYRASGDIIAN
HHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEC
SGFRKQQGRPDATVYAQMRFPIEQPPAYARSQSYVPHRPAVGAHSPYAYPWRDNFCESRS
CCCHHCCCCCCCEEEEEEECCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
FGVGQCATGFGHQGQDIRPGACLPGQADCDVKQQGVVAVRDGVLIRSPKQQAVTLQVNTG
CCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCEEEECCCCCEEEEEEECC
REHIRFRYMHMSPTELDADGVLNGRRVDEGERFGVVGNYLDRPNGTSRHLHFDVQVFTPD
CCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCC
GWLWVNPYTTLVAAYERLLGGRGREVAPDGQPVESEVSAASEDVTRAAAARAGHDPVDTP
CEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA