Definition | Rhodopseudomonas palustris HaA2, complete genome. |
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Accession | NC_007778 |
Length | 5,331,656 |
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The map label for this gene is 86750074
Identifier: 86750074
GI number: 86750074
Start: 3366242
End: 3367864
Strand: Direct
Name: 86750074
Synonym: RPB_2957
Alternate gene names: NA
Gene position: 3366242-3367864 (Clockwise)
Preceding gene: 86750073
Following gene: 86750075
Centisome position: 63.14
GC content: 70.06
Gene sequence:
>1623_bases TTGAGATCGGGATCGATCGGCCGGACATTGCTGCGGCGGGTGCGCGGGCTGCCGCTGCTGCTGATCGCCGCTCTCGTCGC CGCTACGCCGGCCGCCGCAGACGACTTCCGCACCCCCAATGTGACCACGCTGCGGGCCGACTGGGGCGCGGCGCTGAACC AGTTGCGCTCCGAACTGGCCGGCACGCCCGCCGTCGCCACCGAGTTCGTCTTCAGCGGCCGTCGCGGGCTTCCTGCCTAT GATCCGCGCCGGATCCCGGCGCTGGTCCGGCTCAATGGCATCAGCGCCCGGTTCTTCCCCGGCATCGGCCGCAGCGCGGT GCCGGTGCTGCTGCCGTTCGATATCGCCGCCCTGCTCGACGCCGATCCGAAGGCCGAACCGGATCCCGAATTGCTGGCGC GGGTCCAGGTCGGCTTCCGCCCGGCCGAGATGTTCGACGCCGGCCCCTCCGGCTACGACGCGGTGTTCGCGCTCGCGCCC GGCGGCGACGACATGCCGCCGCGGGTATTCGTCAGCCCCATCGAGGTGCAGATCACCGGGTCGAACCTAGTCTACGACAT CGCCGACCCGTTCGGCGGCAGAGGCGAGCCGGTCAAGGCGCTGGCCGCGCAATATCCAGACCTGCGCCGCTTCATCCGCG AAGGCTACGTGCGTTACGCCTTCACGCGGTTCGGCATTGCCTATGTGGTGTCGATCCAGTGCCTCGACTCGGTGCCGAAA GCCAAGCGCCTCGCCTGCCGCGAAAGCTATCCGGTGGCCGAGCGTTTCCTGAAAGCGCTGCGGCTCGCCGGCGGCCGGCC GTATCGCCCGCGCCGCGACATCGCGCCCGCGACCGCCGAGCGGCCGGCGGCGCCGTCGCCGGATTTCACCTATCGGGCAA GTGGCGACATCATTGCCAATTCGGGCTTCCGCAAGCAGCAGGGCCGGCCCGATGCCACCGTTTACGCTCAGATGCGGTTT CCGATCGAGCAGCCGCCGGCCTATGCGCGGTCGCAGTCCTATGTGCCGCACCGTCCCGCGGTCGGCGCGCACAGCCCCTA TGCCTATCCGTGGCGGGACAATTTTTGCGAGAGCCGCAGCTTCGGCGTCGGCCAGTGCGCCACCGGCTTCGGCCATCAGG GCCAGGACATCCGCCCCGGCGCCTGCCTGCCGGGCCAGGCCGATTGCGACGTCAAGCAGCAGGGCGTGGTCGCGGTCCGC GACGGTGTGCTGATCCGTTCGCCGAAGCAGCAGGCGGTGACGCTGCAGGTCAACACCGGCCGCGAGCACATCCGCTTCCG CTATATGCACATGTCGCCGACGGAACTCGACGCCGATGGCGTGCTCAACGGCCGCCGCGTCGATGAAGGCGAGCGCTTCG GCGTGGTCGGCAATTATCTCGATCGCCCCAACGGCACCTCACGCCATCTGCATTTCGACGTCCAGGTGTTCACCCCGGAC GGCTGGCTCTGGGTCAATCCCTACACCACGCTGGTCGCCGCCTATGAACGCCTGCTCGGCGGCCGCGGCCGGGAGGTCGC GCCCGATGGACAGCCGGTGGAGAGCGAGGTCAGCGCCGCCTCCGAGGACGTGACCCGCGCCGCGGCGGCGCGCGCGGGCC ATGATCCGGTCGACACGCCCTGA
Upstream 100 bases:
>100_bases GGTACGGAGCCCACATGCGGCACCTGCGAACGCCCCGGGCTTGGCCGGCGGACGAAAACCCCGGTAGATTGCCTCCGAAC TGCAGGAGGCGCGTCGCGTT
Downstream 100 bases:
>100_bases TCGTCGCCGCGGCTGCCGTTCTGCCCTGCCCGAGATCAATTGCTCGCGGGCCTCTGCCCCGCGCCGGCTTCAGCCGCTAC ACTGCGCCGTATGGCCAGCT
Product: peptidase M23B
Products: NA
Alternate protein names: Peptidase M; Membrane Peptidase; M23 Family Peptidase; Exported Peptidase
Number of amino acids: Translated: 540; Mature: 540
Protein sequence:
>540_residues MRSGSIGRTLLRRVRGLPLLLIAALVAATPAAADDFRTPNVTTLRADWGAALNQLRSELAGTPAVATEFVFSGRRGLPAY DPRRIPALVRLNGISARFFPGIGRSAVPVLLPFDIAALLDADPKAEPDPELLARVQVGFRPAEMFDAGPSGYDAVFALAP GGDDMPPRVFVSPIEVQITGSNLVYDIADPFGGRGEPVKALAAQYPDLRRFIREGYVRYAFTRFGIAYVVSIQCLDSVPK AKRLACRESYPVAERFLKALRLAGGRPYRPRRDIAPATAERPAAPSPDFTYRASGDIIANSGFRKQQGRPDATVYAQMRF PIEQPPAYARSQSYVPHRPAVGAHSPYAYPWRDNFCESRSFGVGQCATGFGHQGQDIRPGACLPGQADCDVKQQGVVAVR DGVLIRSPKQQAVTLQVNTGREHIRFRYMHMSPTELDADGVLNGRRVDEGERFGVVGNYLDRPNGTSRHLHFDVQVFTPD GWLWVNPYTTLVAAYERLLGGRGREVAPDGQPVESEVSAASEDVTRAAAARAGHDPVDTP
Sequences:
>Translated_540_residues MRSGSIGRTLLRRVRGLPLLLIAALVAATPAAADDFRTPNVTTLRADWGAALNQLRSELAGTPAVATEFVFSGRRGLPAY DPRRIPALVRLNGISARFFPGIGRSAVPVLLPFDIAALLDADPKAEPDPELLARVQVGFRPAEMFDAGPSGYDAVFALAP GGDDMPPRVFVSPIEVQITGSNLVYDIADPFGGRGEPVKALAAQYPDLRRFIREGYVRYAFTRFGIAYVVSIQCLDSVPK AKRLACRESYPVAERFLKALRLAGGRPYRPRRDIAPATAERPAAPSPDFTYRASGDIIANSGFRKQQGRPDATVYAQMRF PIEQPPAYARSQSYVPHRPAVGAHSPYAYPWRDNFCESRSFGVGQCATGFGHQGQDIRPGACLPGQADCDVKQQGVVAVR DGVLIRSPKQQAVTLQVNTGREHIRFRYMHMSPTELDADGVLNGRRVDEGERFGVVGNYLDRPNGTSRHLHFDVQVFTPD GWLWVNPYTTLVAAYERLLGGRGREVAPDGQPVESEVSAASEDVTRAAAARAGHDPVDTP >Mature_540_residues MRSGSIGRTLLRRVRGLPLLLIAALVAATPAAADDFRTPNVTTLRADWGAALNQLRSELAGTPAVATEFVFSGRRGLPAY DPRRIPALVRLNGISARFFPGIGRSAVPVLLPFDIAALLDADPKAEPDPELLARVQVGFRPAEMFDAGPSGYDAVFALAP GGDDMPPRVFVSPIEVQITGSNLVYDIADPFGGRGEPVKALAAQYPDLRRFIREGYVRYAFTRFGIAYVVSIQCLDSVPK AKRLACRESYPVAERFLKALRLAGGRPYRPRRDIAPATAERPAAPSPDFTYRASGDIIANSGFRKQQGRPDATVYAQMRF PIEQPPAYARSQSYVPHRPAVGAHSPYAYPWRDNFCESRSFGVGQCATGFGHQGQDIRPGACLPGQADCDVKQQGVVAVR DGVLIRSPKQQAVTLQVNTGREHIRFRYMHMSPTELDADGVLNGRRVDEGERFGVVGNYLDRPNGTSRHLHFDVQVFTPD GWLWVNPYTTLVAAYERLLGGRGREVAPDGQPVESEVSAASEDVTRAAAARAGHDPVDTP
Specific function: Unknown
COG id: COG0739
COG function: function code M; Membrane proteins related to metalloendopeptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58802; Mature: 58802
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSGSIGRTLLRRVRGLPLLLIAALVAATPAAADDFRTPNVTTLRADWGAALNQLRSELA CCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHC GTPAVATEFVFSGRRGLPAYDPRRIPALVRLNGISARFFPGIGRSAVPVLLPFDIAALLD CCCHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCEEECCCCCCCCCCEEECCHHHHHHC ADPKAEPDPELLARVQVGFRPAEMFDAGPSGYDAVFALAPGGDDMPPRVFVSPIEVQITG CCCCCCCCHHHHHHHHCCCCHHHHHCCCCCCCCEEEEECCCCCCCCCEEEECEEEEEEEC SNLVYDIADPFGGRGEPVKALAAQYPDLRRFIREGYVRYAFTRFGIAYVVSIQCLDSVPK CCEEEECCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCHHHHEEHHHHHCCCH AKRLACRESYPVAERFLKALRLAGGRPYRPRRDIAPATAERPAAPSPDFTYRASGDIIAN HHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEC SGFRKQQGRPDATVYAQMRFPIEQPPAYARSQSYVPHRPAVGAHSPYAYPWRDNFCESRS CCCHHCCCCCCCEEEEEEECCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC FGVGQCATGFGHQGQDIRPGACLPGQADCDVKQQGVVAVRDGVLIRSPKQQAVTLQVNTG CCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCEEEECCCCCEEEEEEECC REHIRFRYMHMSPTELDADGVLNGRRVDEGERFGVVGNYLDRPNGTSRHLHFDVQVFTPD CCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCC GWLWVNPYTTLVAAYERLLGGRGREVAPDGQPVESEVSAASEDVTRAAAARAGHDPVDTP CEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MRSGSIGRTLLRRVRGLPLLLIAALVAATPAAADDFRTPNVTTLRADWGAALNQLRSELA CCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHC GTPAVATEFVFSGRRGLPAYDPRRIPALVRLNGISARFFPGIGRSAVPVLLPFDIAALLD CCCHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCEEECCCCCCCCCCEEECCHHHHHHC ADPKAEPDPELLARVQVGFRPAEMFDAGPSGYDAVFALAPGGDDMPPRVFVSPIEVQITG CCCCCCCCHHHHHHHHCCCCHHHHHCCCCCCCCEEEEECCCCCCCCCEEEECEEEEEEEC SNLVYDIADPFGGRGEPVKALAAQYPDLRRFIREGYVRYAFTRFGIAYVVSIQCLDSVPK CCEEEECCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCHHHHEEHHHHHCCCH AKRLACRESYPVAERFLKALRLAGGRPYRPRRDIAPATAERPAAPSPDFTYRASGDIIAN HHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEC SGFRKQQGRPDATVYAQMRFPIEQPPAYARSQSYVPHRPAVGAHSPYAYPWRDNFCESRS CCCHHCCCCCCCEEEEEEECCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC FGVGQCATGFGHQGQDIRPGACLPGQADCDVKQQGVVAVRDGVLIRSPKQQAVTLQVNTG CCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCEEEECCCCCEEEEEEECC REHIRFRYMHMSPTELDADGVLNGRRVDEGERFGVVGNYLDRPNGTSRHLHFDVQVFTPD CCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCC GWLWVNPYTTLVAAYERLLGGRGREVAPDGQPVESEVSAASEDVTRAAAARAGHDPVDTP CEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA