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The map label for this gene is recO

Identifier: 86749733

GI number: 86749733

Start: 2998028

End: 2998777

Strand: Direct

Name: recO

Synonym: RPB_2615

Alternate gene names: 86749733

Gene position: 2998028-2998777 (Clockwise)

Preceding gene: 86749732

Following gene: 86749734

Centisome position: 56.23

GC content: 68.13

Gene sequence:

>750_bases
ATGGAATGGAGCGACGAGGGCATCATTCTCGGGGTCCGGCGGCACGGCGAGGCCGGCGCGATCGTCGAGCTTTTGACCCG
CGGCCACGGCCGGCATCTCGGCTTGGTGCGCGGCGGCGCGTCGTCGCGGCTGCGGCCGCTGCTGCAGCCCGGCAACAGCG
TGCTCGCGGTGTGGCGCGCGCGGCTCGACGAACATCTGGGATACTATCAGCTCGAAGGCACGCGGATGCGCGCCGCCACG
ATGCTGGCGTCCTCGCACGCGGTTTACGGCATCACCCATCTCGCCTCGCTGGCACGGTTGTTGCCCGAGCGCGACCCGCA
TGAAGACATATACGAGATGCTGGAACGCACGCTGGACGATTTCGACGACGTCGGCGATGCGGCGACGCATCTGATCCGGT
TCGAACTGGCGATGCTGGCCGAACTCGGCTTCGGCCTCGATCTGTCGGCCTGTGCGGCAACCGGAGCGACCACCGACCTG
ATCTACGTCTCGCCGAAATCCGGCGGCGCGGTGTCGCGCACAGCCGGCGAGCCGTGGCGCGAAAAGCTGTTGCGACTGCC
GGACTTCCTGCGCGAGGACAATGACGGCCGCAACGGCTGGTCCGATCAGGATCTGCGCGACGGCTTCGATCTGACCGGGC
GCTTCCTGCTGCGCAACGTGCTGGAGCCGCGCGGGCAGGGCCATTCCGACGCCCGCGACGGCTTCATCAATGCGGTGGCG
AAGCATCTGGCGCGGGCGGCGATCGTTTGA

Upstream 100 bases:

>100_bases
ATCTATCTGTCCTACACCGGCGACGCTCGCGGCTGGTTCACCGCTTGACGCCGCATCCGCCGCGGCTGCGCTCCGGCGAA
TAATCCTGTACGATCAGCCG

Downstream 100 bases:

>100_bases
GCCATCGGCGGAATTCAGGCGTAGCGCGGCAACCGCCGGCCCGGCAACAGATCGTAGGGCGCGCGCCAGCCCGGCAAGGC
CGCGATCCGGCCGAGCCACG

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination protein O

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MEWSDEGIILGVRRHGEAGAIVELLTRGHGRHLGLVRGGASSRLRPLLQPGNSVLAVWRARLDEHLGYYQLEGTRMRAAT
MLASSHAVYGITHLASLARLLPERDPHEDIYEMLERTLDDFDDVGDAATHLIRFELAMLAELGFGLDLSACAATGATTDL
IYVSPKSGGAVSRTAGEPWREKLLRLPDFLREDNDGRNGWSDQDLRDGFDLTGRFLLRNVLEPRGQGHSDARDGFINAVA
KHLARAAIV

Sequences:

>Translated_249_residues
MEWSDEGIILGVRRHGEAGAIVELLTRGHGRHLGLVRGGASSRLRPLLQPGNSVLAVWRARLDEHLGYYQLEGTRMRAAT
MLASSHAVYGITHLASLARLLPERDPHEDIYEMLERTLDDFDDVGDAATHLIRFELAMLAELGFGLDLSACAATGATTDL
IYVSPKSGGAVSRTAGEPWREKLLRLPDFLREDNDGRNGWSDQDLRDGFDLTGRFLLRNVLEPRGQGHSDARDGFINAVA
KHLARAAIV
>Mature_249_residues
MEWSDEGIILGVRRHGEAGAIVELLTRGHGRHLGLVRGGASSRLRPLLQPGNSVLAVWRARLDEHLGYYQLEGTRMRAAT
MLASSHAVYGITHLASLARLLPERDPHEDIYEMLERTLDDFDDVGDAATHLIRFELAMLAELGFGLDLSACAATGATTDL
IYVSPKSGGAVSRTAGEPWREKLLRLPDFLREDNDGRNGWSDQDLRDGFDLTGRFLLRNVLEPRGQGHSDARDGFINAVA
KHLARAAIV

Specific function: Involved in DNA repair and recF pathway recombination

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECO_RHOP2 (Q2IWU2)

Other databases:

- EMBL:   CP000250
- RefSeq:   YP_486229.1
- ProteinModelPortal:   Q2IWU2
- STRING:   Q2IWU2
- GeneID:   3910407
- GenomeReviews:   CP000250_GR
- KEGG:   rpb:RPB_2615
- eggNOG:   COG1381
- HOGENOM:   HBG474229
- OMA:   PERDPHP
- ProtClustDB:   PRK00085
- BioCyc:   RPAL316058:RPB_2615-MONOMER
- HAMAP:   MF_00201
- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717
- TIGRFAMs:   TIGR00613

Pfam domain/function: PF02565 RecO; PF11967 RecO_N; SSF57863 ArfGAP; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 27398; Mature: 27398

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEWSDEGIILGVRRHGEAGAIVELLTRGHGRHLGLVRGGASSRLRPLLQPGNSVLAVWRA
CCCCCCCEEEEEECCCCCHHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCCCHHHHHHHH
RLDEHLGYYQLEGTRMRAATMLASSHAVYGITHLASLARLLPERDPHEDIYEMLERTLDD
HHHHHCCEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
FDDVGDAATHLIRFELAMLAELGFGLDLSACAATGATTDLIYVSPKSGGAVSRTAGEPWR
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCEEEEECCCCCCCCCCCCCCHHH
EKLLRLPDFLREDNDGRNGWSDQDLRDGFDLTGRFLLRNVLEPRGQGHSDARDGFINAVA
HHHHHHHHHHHCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
KHLARAAIV
HHHHHHHCC
>Mature Secondary Structure
MEWSDEGIILGVRRHGEAGAIVELLTRGHGRHLGLVRGGASSRLRPLLQPGNSVLAVWRA
CCCCCCCEEEEEECCCCCHHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCCCHHHHHHHH
RLDEHLGYYQLEGTRMRAATMLASSHAVYGITHLASLARLLPERDPHEDIYEMLERTLDD
HHHHHCCEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
FDDVGDAATHLIRFELAMLAELGFGLDLSACAATGATTDLIYVSPKSGGAVSRTAGEPWR
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCEEEEECCCCCCCCCCCCCCHHH
EKLLRLPDFLREDNDGRNGWSDQDLRDGFDLTGRFLLRNVLEPRGQGHSDARDGFINAVA
HHHHHHHHHHHCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
KHLARAAIV
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA