| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86749712
Identifier: 86749712
GI number: 86749712
Start: 2976012
End: 2976539
Strand: Direct
Name: 86749712
Synonym: RPB_2594
Alternate gene names: NA
Gene position: 2976012-2976539 (Clockwise)
Preceding gene: 86749711
Following gene: 86749713
Centisome position: 55.82
GC content: 65.91
Gene sequence:
>528_bases ATGAACCGATTCATCCGTACGTTCGCCTCCGCTGCCGTTGCCAGTCTGCTGTCCGTCGCCGCCGCGCAGGCGGCGGAGGT GAAGGCCGGCGATCTGGTCATCACCGAGTCCTGGAGCCGCGCCACGCCGGGCGGCGCCAAGGTTGCCGGCGGTTTCCTGA CCATCGAGAACAAGGGCACGACCGCCGACCGCCTGATCGCCGGTTCTGCCGACATCGCCGGCAAGTTCGAGATCCACGAG ATGTCGATGGACAATGGCGTGATGAAGATGCGCCAGCTCGACAAGGGCTTGGCGATCGAGCCCGGCAAGACCGTCAAGCT CGCCCCCGGCGGCTATCACGTCATGCTGATGGACCTGAAGGGCCCGCTGAAGGAAGGCGAGAAGGTGCCGGTGACGCTGC AGTTCGAGAAGGCCGGCAAGGTGCAAGTCACGCTCGACGTCGCCGGCATCGGCGCCAAGGCGCCCGGCGACGCCGGCGGC AGCATGATGAAGATGGACCCGAAGAGCCATTCGGGGATGAAGCACTGA
Upstream 100 bases:
>100_bases CAGCAGTTCAGCGGACCGGAGCGAGGGCGGATGCGTCGCGCATCGGCTGTGCTTGGTCCGCTTCATTCCCACCCCATTCC ATCCCAACGAGGATCCGACC
Downstream 100 bases:
>100_bases TGCCGCGGCGACGTGTTGGAATCGCGATGGCCGCCTATGCGGCCGTCGCGGCGATCGGCGGTCCGGCCGCGGCCCATGTC TCGCTGCAGCCCAACGAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MNRFIRTFASAAVASLLSVAAAQAAEVKAGDLVITESWSRATPGGAKVAGGFLTIENKGTTADRLIAGSADIAGKFEIHE MSMDNGVMKMRQLDKGLAIEPGKTVKLAPGGYHVMLMDLKGPLKEGEKVPVTLQFEKAGKVQVTLDVAGIGAKAPGDAGG SMMKMDPKSHSGMKH
Sequences:
>Translated_175_residues MNRFIRTFASAAVASLLSVAAAQAAEVKAGDLVITESWSRATPGGAKVAGGFLTIENKGTTADRLIAGSADIAGKFEIHE MSMDNGVMKMRQLDKGLAIEPGKTVKLAPGGYHVMLMDLKGPLKEGEKVPVTLQFEKAGKVQVTLDVAGIGAKAPGDAGG SMMKMDPKSHSGMKH >Mature_175_residues MNRFIRTFASAAVASLLSVAAAQAAEVKAGDLVITESWSRATPGGAKVAGGFLTIENKGTTADRLIAGSADIAGKFEIHE MSMDNGVMKMRQLDKGLAIEPGKTVKLAPGGYHVMLMDLKGPLKEGEKVPVTLQFEKAGKVQVTLDVAGIGAKAPGDAGG SMMKMDPKSHSGMKH
Specific function: Unknown
COG id: COG2847
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007410 [H]
Pfam domain/function: PF04314 DUF461 [H]
EC number: NA
Molecular weight: Translated: 18194; Mature: 18194
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.3 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.3 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRFIRTFASAAVASLLSVAAAQAAEVKAGDLVITESWSRATPGGAKVAGGFLTIENKGT CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEECCEEEEECCCC TADRLIAGSADIAGKFEIHEMSMDNGVMKMRQLDKGLAIEPGKTVKLAPGGYHVMLMDLK CHHEEEECCCCCCCEEEEEEECCCCHHHHHHHHCCCCEECCCCEEEECCCCEEEEEEECC GPLKEGEKVPVTLQFEKAGKVQVTLDVAGIGAKAPGDAGGSMMKMDPKSHSGMKH CCCCCCCCCEEEEEECCCCEEEEEEEEEECCCCCCCCCCCCEEEECCCCCCCCCC >Mature Secondary Structure MNRFIRTFASAAVASLLSVAAAQAAEVKAGDLVITESWSRATPGGAKVAGGFLTIENKGT CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEECCEEEEECCCC TADRLIAGSADIAGKFEIHEMSMDNGVMKMRQLDKGLAIEPGKTVKLAPGGYHVMLMDLK CHHEEEECCCCCCCEEEEEEECCCCHHHHHHHHCCCCEECCCCEEEECCCCEEEEEEECC GPLKEGEKVPVTLQFEKAGKVQVTLDVAGIGAKAPGDAGGSMMKMDPKSHSGMKH CCCCCCCCCEEEEEECCCCEEEEEEEEEECCCCCCCCCCCCEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA