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The map label for this gene is yjeF [C]

Identifier: 86749678

GI number: 86749678

Start: 2936181

End: 2937740

Strand: Direct

Name: yjeF [C]

Synonym: RPB_2560

Alternate gene names: 86749678

Gene position: 2936181-2937740 (Clockwise)

Preceding gene: 86749674

Following gene: 86749680

Centisome position: 55.07

GC content: 69.17

Gene sequence:

>1560_bases
TTGTGGGCGCGTTCTGGGGCCTGCTGCCTCAGTGTGAGGCGAGAGTACTGGGAATTGGGCATGGAGCTACTGACGCCCGC
TGAAATGGACCGCGCGGACCTGCTCACGATCGCCTGGGGATCGTCCGGCTTCGCCTTGATGCTGCATGCCGGCCGGCATG
TCGCGCAGGCTGCGATCGAGCTGGCGGAAACCGGACCGATCCTGGTGATCGCCGGTCCCGGCAACAATGGCGGCGACGGT
TTGATCGCGGCCACCGAGCTGGTGGCGCTCGGCCGCACCGTGCACGTCATGTTGCTCGGCGAGCGCGACGCGCTGAAAGG
CGATGCGGCGCTGGCGGCGCGGGAGTGGAAGGGGCCGCTGCTGCCGTTCCTGCCACAGTCGATCGGGACGCCGTCTCTGA
TCATCGACGCGCTGTTCGGCTCCGGCCTCAATCGGCCGGTGAAGGATCAGGCGCTGGAGATGATCGAGGCGGTCAACGCC
ACCGGCGTGCCGGTGCTGGCCGTCGATCTGCCGAGCGGCATCAACGGCGCCACCGGCGCGGTGATGGGCGCCGCGATCAG
GGCACGTGAGACGGTGACGTTCTTCCGCCGCAAGCCCGGGCATCTGCTGGTGCCGGGGCGGCTGTATTGCGGCAAGCTGA
AGGTCGCCGACATCGGCATCGATCCGGCGGTGCTCGACGAGATCAAGCCGCAGGCGTTCGAGAACGATCCGAATCTGTGG
CTGCCGCATTTCCCGGTGCCGCGCGCCGACGGCCACAAATACGGCCGCGGCCATGCCGTGGTGATCTCCGGCGAACTGTC
GCAGACCGGCGCGGCGCGGCTGGCGGCCCGCGGGGCGTTGCGGGCCGGTGCGGGGCTGGTGACGCTGGCGTCACCGTGCG
ATGCGCTCGCGGTGAATGCCACGGCGCTGACCGCCGTGATGGTCCGAGCGATCGATACGCCGGACCAATTGGCGGGAATG
CTGGCCGACCGCCGTTTCAATGCCGTCGGCGTCGGGCCCGGCGCGGGCATCGACGACCGCACCCGCGGCAACGTGCTGGC
GGCGCTGGCGGCGGGCGCCGGCACGGTGCTCGATGCCGACGCGCTGACGGTGTTCGCAGGTGCCCCCGAGACGCTGTTCG
AGGCGATCAAATCCGGCGCCAATCCACAGGTTGTCCTCACCCCGCACGAGGGCGAATTCCCTCGCTTGTTCAGTGATATG
AGCAACAAAAATCCACTTCGCTCGAAACTCGAACGGGTCCGCGTAGCTGCGCAACGTTCGGGGGCCGTGGTGTTGCTCAA
GGGCCCGGACACGGTGGTCGCCTCACCGGACGGCCGCGCGGCGATCGCCTTCAACGCGCCGCCCTGGCTGGCGACGGCGG
GCTCCGGAGACGTGCTGACAGGCATCATCACCGGATTGCTGGCACAGCGGGTGGCGGCGTTCGAGGCGGCCTGCATCGGC
GTGTGGATGCACGGTGAGGCGGCCTGCGAGGCTGGGCCCGGCCTGATCGCCGAGGACCTGACCGAGACGCTGCCGGCGGT
GATCCGGCGGGTCTATGACGAACTCGGCATCGAGTACTGA

Upstream 100 bases:

>100_bases
TTATTAAGGCCGCGTCCGCGTAGACTTTCGAGATCAGCCCGCATCGCGACTGACTAATGATAGGGCGGTCGGCTTATTAT
ATGTGCAATCTGAGGGGCGG

Downstream 100 bases:

>100_bases
TCGAGGGCGGTTCAACCCGCCTCAGCGTCATCCTGAGGCGCTCGGCGTGCCGCGCTCCTGGCGCGGCGCGTCGGGCCTCG
AAGGATGGGCGGCAAGCTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 519; Mature: 519

Protein sequence:

>519_residues
MWARSGACCLSVRREYWELGMELLTPAEMDRADLLTIAWGSSGFALMLHAGRHVAQAAIELAETGPILVIAGPGNNGGDG
LIAATELVALGRTVHVMLLGERDALKGDAALAAREWKGPLLPFLPQSIGTPSLIIDALFGSGLNRPVKDQALEMIEAVNA
TGVPVLAVDLPSGINGATGAVMGAAIRARETVTFFRRKPGHLLVPGRLYCGKLKVADIGIDPAVLDEIKPQAFENDPNLW
LPHFPVPRADGHKYGRGHAVVISGELSQTGAARLAARGALRAGAGLVTLASPCDALAVNATALTAVMVRAIDTPDQLAGM
LADRRFNAVGVGPGAGIDDRTRGNVLAALAAGAGTVLDADALTVFAGAPETLFEAIKSGANPQVVLTPHEGEFPRLFSDM
SNKNPLRSKLERVRVAAQRSGAVVLLKGPDTVVASPDGRAAIAFNAPPWLATAGSGDVLTGIITGLLAQRVAAFEAACIG
VWMHGEAACEAGPGLIAEDLTETLPAVIRRVYDELGIEY

Sequences:

>Translated_519_residues
MWARSGACCLSVRREYWELGMELLTPAEMDRADLLTIAWGSSGFALMLHAGRHVAQAAIELAETGPILVIAGPGNNGGDG
LIAATELVALGRTVHVMLLGERDALKGDAALAAREWKGPLLPFLPQSIGTPSLIIDALFGSGLNRPVKDQALEMIEAVNA
TGVPVLAVDLPSGINGATGAVMGAAIRARETVTFFRRKPGHLLVPGRLYCGKLKVADIGIDPAVLDEIKPQAFENDPNLW
LPHFPVPRADGHKYGRGHAVVISGELSQTGAARLAARGALRAGAGLVTLASPCDALAVNATALTAVMVRAIDTPDQLAGM
LADRRFNAVGVGPGAGIDDRTRGNVLAALAAGAGTVLDADALTVFAGAPETLFEAIKSGANPQVVLTPHEGEFPRLFSDM
SNKNPLRSKLERVRVAAQRSGAVVLLKGPDTVVASPDGRAAIAFNAPPWLATAGSGDVLTGIITGLLAQRVAAFEAACIG
VWMHGEAACEAGPGLIAEDLTETLPAVIRRVYDELGIEY
>Mature_519_residues
MWARSGACCLSVRREYWELGMELLTPAEMDRADLLTIAWGSSGFALMLHAGRHVAQAAIELAETGPILVIAGPGNNGGDG
LIAATELVALGRTVHVMLLGERDALKGDAALAAREWKGPLLPFLPQSIGTPSLIIDALFGSGLNRPVKDQALEMIEAVNA
TGVPVLAVDLPSGINGATGAVMGAAIRARETVTFFRRKPGHLLVPGRLYCGKLKVADIGIDPAVLDEIKPQAFENDPNLW
LPHFPVPRADGHKYGRGHAVVISGELSQTGAARLAARGALRAGAGLVTLASPCDALAVNATALTAVMVRAIDTPDQLAGM
LADRRFNAVGVGPGAGIDDRTRGNVLAALAAGAGTVLDADALTVFAGAPETLFEAIKSGANPQVVLTPHEGEFPRLFSDM
SNKNPLRSKLERVRVAAQRSGAVVLLKGPDTVVASPDGRAAIAFNAPPWLATAGSGDVLTGIITGLLAQRVAAFEAACIG
VWMHGEAACEAGPGLIAEDLTETLPAVIRRVYDELGIEY

Specific function: Unknown

COG id: COG0063

COG function: function code G; Predicted sugar kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 YjeF N-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1790609, Length=509, Percent_Identity=34.1846758349705, Blast_Score=184, Evalue=1e-47,
Organism=Caenorhabditis elegans, GI17509719, Length=118, Percent_Identity=34.7457627118644, Blast_Score=75, Evalue=9e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017953
- InterPro:   IPR000631
- InterPro:   IPR004443 [H]

Pfam domain/function: PF01256 Carb_kinase; PF03853 YjeF_N [H]

EC number: NA

Molecular weight: Translated: 53911; Mature: 53911

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: PS01050 UPF0031_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWARSGACCLSVRREYWELGMELLTPAEMDRADLLTIAWGSSGFALMLHAGRHVAQAAIE
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCEEEEECCHHHHHHHHH
LAETGPILVIAGPGNNGGDGLIAATELVALGRTVHVMLLGERDALKGDAALAAREWKGPL
HHCCCCEEEEECCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHCCCCC
LPFLPQSIGTPSLIIDALFGSGLNRPVKDQALEMIEAVNATGVPVLAVDLPSGINGATGA
CCCCCHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHH
VMGAAIRARETVTFFRRKPGHLLVPGRLYCGKLKVADIGIDPAVLDEIKPQAFENDPNLW
HHHHHHHHHHHHHHHHCCCCCEEECCCEEECEEEEEECCCCHHHHHHCCCHHCCCCCCEE
LPHFPVPRADGHKYGRGHAVVISGELSQTGAARLAARGALRAGAGLVTLASPCDALAVNA
CCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEECCCCCHHEECH
TALTAVMVRAIDTPDQLAGMLADRRFNAVGVGPGAGIDDRTRGNVLAALAAGAGTVLDAD
HHHHHHHHHHCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCEEEEECCCCCCEEECC
ALTVFAGAPETLFEAIKSGANPQVVLTPHEGEFPRLFSDMSNKNPLRSKLERVRVAAQRS
CEEEECCCCHHHHHHHHCCCCCEEEEECCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHCC
GAVVLLKGPDTVVASPDGRAAIAFNAPPWLATAGSGDVLTGIITGLLAQRVAAFEAACIG
CCEEEEECCCEEEECCCCCEEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHEEE
VWMHGEAACEAGPGLIAEDLTETLPAVIRRVYDELGIEY
EEECCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MWARSGACCLSVRREYWELGMELLTPAEMDRADLLTIAWGSSGFALMLHAGRHVAQAAIE
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCEEEEECCHHHHHHHHH
LAETGPILVIAGPGNNGGDGLIAATELVALGRTVHVMLLGERDALKGDAALAAREWKGPL
HHCCCCEEEEECCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHCCCCC
LPFLPQSIGTPSLIIDALFGSGLNRPVKDQALEMIEAVNATGVPVLAVDLPSGINGATGA
CCCCCHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHH
VMGAAIRARETVTFFRRKPGHLLVPGRLYCGKLKVADIGIDPAVLDEIKPQAFENDPNLW
HHHHHHHHHHHHHHHHCCCCCEEECCCEEECEEEEEECCCCHHHHHHCCCHHCCCCCCEE
LPHFPVPRADGHKYGRGHAVVISGELSQTGAARLAARGALRAGAGLVTLASPCDALAVNA
CCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEECCCCCHHEECH
TALTAVMVRAIDTPDQLAGMLADRRFNAVGVGPGAGIDDRTRGNVLAALAAGAGTVLDAD
HHHHHHHHHHCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCEEEEECCCCCCEEECC
ALTVFAGAPETLFEAIKSGANPQVVLTPHEGEFPRLFSDMSNKNPLRSKLERVRVAAQRS
CEEEECCCCHHHHHHHHCCCCCEEEEECCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHCC
GAVVLLKGPDTVVASPDGRAAIAFNAPPWLATAGSGDVLTGIITGLLAQRVAAFEAACIG
CCEEEEECCCEEEECCCCCEEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHEEE
VWMHGEAACEAGPGLIAEDLTETLPAVIRRVYDELGIEY
EEECCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]