Definition | Rhodopseudomonas palustris HaA2, complete genome. |
---|---|
Accession | NC_007778 |
Length | 5,331,656 |
Click here to switch to the map view.
The map label for this gene is 86749635
Identifier: 86749635
GI number: 86749635
Start: 2875529
End: 2875915
Strand: Direct
Name: 86749635
Synonym: RPB_2515
Alternate gene names: NA
Gene position: 2875529-2875915 (Clockwise)
Preceding gene: 86749632
Following gene: 86749636
Centisome position: 53.93
GC content: 67.96
Gene sequence:
>387_bases ATGGTTGTGATGGTTGCGCTGCTGGCTTCGGGGGCGGCGCTGGCGCAGACCACGAGCGCGCCGAGCAATCCGCCGATGAT CGGGGATCGGCCGCTGGTGCAAGTCAAACCGCGCGGCGGTGCGGCGGCGAAGAGCGACGCCGCTCAACCGGCCAAGCCGT CGATCGCGGCGCAACTGCAGGGCTGTCTCGAAATCGAGGACGGCAGCAAGGAACGGCTCGACTGCTACGATGCGATCTAT CCGCCGAAGCCGAAGACGCCGAAGCCCGGCGCCAAGCAGCCGCGAGCCAAGGCGGTTTCCGACTGCCGCGTCCTCAAGGA GCAGGACGAGCGGCTGGCCTGCTTCAACGGCTTTGCGCAGGCTCTGCCGAAGCCGCCGAAGAGCTGA
Upstream 100 bases:
>100_bases CGCTCGGATTTGACGAAGCGCGGGTGTCTGAACAATTGCCGCACGCGCAGGGGCCGCGCCGGTCGCGCGTATATCGACGG GGATGGGTTCGATGAGAACG
Downstream 100 bases:
>100_bases GGCGGATATCCTGACCATCGGGAACAACTGCCGGGGCGCGGTCTTGTCCAGCACCCGATGAAACCCTTCGCACCCGATAC GCCGCTCGGCCGGCTGATGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MVVMVALLASGAALAQTTSAPSNPPMIGDRPLVQVKPRGGAAAKSDAAQPAKPSIAAQLQGCLEIEDGSKERLDCYDAIY PPKPKTPKPGAKQPRAKAVSDCRVLKEQDERLACFNGFAQALPKPPKS
Sequences:
>Translated_128_residues MVVMVALLASGAALAQTTSAPSNPPMIGDRPLVQVKPRGGAAAKSDAAQPAKPSIAAQLQGCLEIEDGSKERLDCYDAIY PPKPKTPKPGAKQPRAKAVSDCRVLKEQDERLACFNGFAQALPKPPKS >Mature_128_residues MVVMVALLASGAALAQTTSAPSNPPMIGDRPLVQVKPRGGAAAKSDAAQPAKPSIAAQLQGCLEIEDGSKERLDCYDAIY PPKPKTPKPGAKQPRAKAVSDCRVLKEQDERLACFNGFAQALPKPPKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13406; Mature: 13406
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVMVALLASGAALAQTTSAPSNPPMIGDRPLVQVKPRGGAAAKSDAAQPAKPSIAAQLQ CEEEEEEHHCCHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHH GCLEIEDGSKERLDCYDAIYPPKPKTPKPGAKQPRAKAVSDCRVLKEQDERLACFNGFAQ CCEECCCCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH ALPKPPKS HCCCCCCC >Mature Secondary Structure MVVMVALLASGAALAQTTSAPSNPPMIGDRPLVQVKPRGGAAAKSDAAQPAKPSIAAQLQ CEEEEEEHHCCHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHH GCLEIEDGSKERLDCYDAIYPPKPKTPKPGAKQPRAKAVSDCRVLKEQDERLACFNGFAQ CCEECCCCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH ALPKPPKS HCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA