The gene/protein map for NC_007778 is currently unavailable.
Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

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The map label for this gene is ybeQ [H]

Identifier: 86749631

GI number: 86749631

Start: 2871160

End: 2872023

Strand: Direct

Name: ybeQ [H]

Synonym: RPB_2511

Alternate gene names: 86749631

Gene position: 2871160-2872023 (Clockwise)

Preceding gene: 86749628

Following gene: 86749632

Centisome position: 53.85

GC content: 69.79

Gene sequence:

>864_bases
ATGAAGCCGATGACGGGATGTGCAGGGAACGTGCGCAGGATCACTCTGGGGATCGCCGGCGGAATTGTTGCGACGCTGCT
GGCGTCGGTCGCAGCAGCCCCGGCGCGGGCGCAGTCCGCCGACCTGGCGCTGTGCGACCGGATCGCCGCTGACCCGGCCG
ACCCGGACAAGCCTGCGGGCGTCAAGGGCGTTGCCGAGATCGCGCCGGGCGACGTCGAGACCGCGATCAGATATTGCCGG
ACCGCTGCAGGCGGCGCGCGCCGCGCAATGTACGCACTCGGCCGGGCCTATGCGGCGAACCGGCAGCCGGCGGAGGCGCT
TGCGGCGTTTCGCAAGGCGGCCGACAAGGGCAGCACCTCGGCGATGGTCGAACTCGGGGTCGCCTATGCGACCGGCGCCG
GCGTCGCCAAGGACGATGCCAAGGCACGGCAATTGTTCGAGCGCGCGGCCGAAGCCGGCAATCCACGCGGCGTCAGCAAT
CTCGCAGCGCTCGGCGGCGGCACGCCATCCGATCCCGGCAAGACCAGGGCCTTGCTGGCCAAGGGGGCGGAAACCAACGC
CGAGGCGCAATACCAGCTCGGCATGATGCTGGCGGAAGGTCTAGGTGGCCCGAAGGACGATGTCGCCGCGCGGGCGCTGT
TCGAGAAAGCGGCAGCCCAGGGCCATCCGGCTGCGCTCGAGCGGATGGGGGCGTTTGCGCAGAGCGGGCGCGGCGGACCG
AAGGATTCCGCTGCCGCCAAGGGATTCTACGAAAAGGCCGCCGCGCTCGGCAACGCCGACGCCGCCGCGGCGTTGAAGCG
GGCGGATTGTCCGTTCGCGATCAAGGACAAGCAGGGAAAGCTTGTCACCAACCTGTGCTTCTAG

Upstream 100 bases:

>100_bases
TTTGCCGGCGGCCGCAGCAAAGGCCATTTTCGCGGCGAGGAAGCGGCATTTGGGACGGCAGGGCTGTGGGCGCCGGACGG
AGCCAGGGCGCAAAGGGATC

Downstream 100 bases:

>100_bases
CGCATGATCCCGACACGTGGATGCCGGCTGTGGGAGACGATCGTGCTCAACCCGAATCCTGAGCAGGAAGACGATTCGAC
CGACCGTCGTCCTGCACCGG

Product: Sel1-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MKPMTGCAGNVRRITLGIAGGIVATLLASVAAAPARAQSADLALCDRIAADPADPDKPAGVKGVAEIAPGDVETAIRYCR
TAAGGARRAMYALGRAYAANRQPAEALAAFRKAADKGSTSAMVELGVAYATGAGVAKDDAKARQLFERAAEAGNPRGVSN
LAALGGGTPSDPGKTRALLAKGAETNAEAQYQLGMMLAEGLGGPKDDVAARALFEKAAAQGHPAALERMGAFAQSGRGGP
KDSAAAKGFYEKAAALGNADAAAALKRADCPFAIKDKQGKLVTNLCF

Sequences:

>Translated_287_residues
MKPMTGCAGNVRRITLGIAGGIVATLLASVAAAPARAQSADLALCDRIAADPADPDKPAGVKGVAEIAPGDVETAIRYCR
TAAGGARRAMYALGRAYAANRQPAEALAAFRKAADKGSTSAMVELGVAYATGAGVAKDDAKARQLFERAAEAGNPRGVSN
LAALGGGTPSDPGKTRALLAKGAETNAEAQYQLGMMLAEGLGGPKDDVAARALFEKAAAQGHPAALERMGAFAQSGRGGP
KDSAAAKGFYEKAAALGNADAAAALKRADCPFAIKDKQGKLVTNLCF
>Mature_287_residues
MKPMTGCAGNVRRITLGIAGGIVATLLASVAAAPARAQSADLALCDRIAADPADPDKPAGVKGVAEIAPGDVETAIRYCR
TAAGGARRAMYALGRAYAANRQPAEALAAFRKAADKGSTSAMVELGVAYATGAGVAKDDAKARQLFERAAEAGNPRGVSN
LAALGGGTPSDPGKTRALLAKGAETNAEAQYQLGMMLAEGLGGPKDDVAARALFEKAAAQGHPAALERMGAFAQSGRGGP
KDSAAAKGFYEKAAALGNADAAAALKRADCPFAIKDKQGKLVTNLCF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeT [H]

Homologues:

Organism=Homo sapiens, GI151301150, Length=231, Percent_Identity=29.4372294372294, Blast_Score=71, Evalue=1e-12,
Organism=Escherichia coli, GI87081769, Length=202, Percent_Identity=33.6633663366337, Blast_Score=69, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 28856; Mature: 28856

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPMTGCAGNVRRITLGIAGGIVATLLASVAAAPARAQSADLALCDRIAADPADPDKPAG
CCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCC
VKGVAEIAPGDVETAIRYCRTAAGGARRAMYALGRAYAANRQPAEALAAFRKAADKGSTS
CCHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCH
AMVELGVAYATGAGVAKDDAKARQLFERAAEAGNPRGVSNLAALGGGTPSDPGKTRALLA
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCHHHHHHH
KGAETNAEAQYQLGMMLAEGLGGPKDDVAARALFEKAAAQGHPAALERMGAFAQSGRGGP
CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCC
KDSAAAKGFYEKAAALGNADAAAALKRADCPFAIKDKQGKLVTNLCF
CCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEECCCCCCHHHHCC
>Mature Secondary Structure
MKPMTGCAGNVRRITLGIAGGIVATLLASVAAAPARAQSADLALCDRIAADPADPDKPAG
CCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCC
VKGVAEIAPGDVETAIRYCRTAAGGARRAMYALGRAYAANRQPAEALAAFRKAADKGSTS
CCHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCH
AMVELGVAYATGAGVAKDDAKARQLFERAAEAGNPRGVSNLAALGGGTPSDPGKTRALLA
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCHHHHHHH
KGAETNAEAQYQLGMMLAEGLGGPKDDVAARALFEKAAAQGHPAALERMGAFAQSGRGGP
CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCC
KDSAAAKGFYEKAAALGNADAAAALKRADCPFAIKDKQGKLVTNLCF
CCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEECCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]