Definition | Rhodopseudomonas palustris HaA2, complete genome. |
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Accession | NC_007778 |
Length | 5,331,656 |
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The map label for this gene is yceG [C]
Identifier: 86749590
GI number: 86749590
Start: 2826269
End: 2827516
Strand: Direct
Name: yceG [C]
Synonym: RPB_2470
Alternate gene names: 86749590
Gene position: 2826269-2827516 (Clockwise)
Preceding gene: 86749589
Following gene: 86749591
Centisome position: 53.01
GC content: 64.02
Gene sequence:
>1248_bases ATGAGTGAAAGGCCGCCGATCTCGCCGAGAAGTCCGCGCGCGGCGCTGGAGCCGGAGCAACTTCCGCCACCGCCGAAACG ATCGGATCGTGCGCGCAATCCGCTGGTGATTATTGGCAACGCCATCATCACGCTGGTGCTCGTACTGATGATCGGCGCAG GCGGCATCTATGTCTACGGCAAGCAGAAGATCGAGGCTGCCGGGCCGTTGCAGGACGACAAGGTCGTCAACATTCCGCAG CGCGCCGGGCTGGGCGACATCGCCGAGATCCTGCAGCGCGAGGGCGTGATCGAAAACAATCGCTGGGTGTTCATCGGCAG TGTGCTGGCCCTGAAGGCGCGGGCGGATCTCAAGCCCGGCGAATATTCATTTCAGAAGGAAGCCAGCCTTCGCGACGTGA TCGGCACCATCGTCGAAGGCAAGGTGGTTCAGCACGCCGTGACGATCCCCGAAGGTTTGACCTCCGAGCAGATCGTCGCG CGGCTCACGGACAACAACATCCTCACCGGAAGCCTCCGCGAAATTCCGCGAGAGGGAACCTTGCTGCCCGAGACCTACAA ATTTCCCCGGGGCACGCCGCGCGAGCAGGTCATCAACAGGATGCAGCAGGCGCAGAAGCGTGTGCTGAGCGAAGTCTGGG AACGTCGCAACCCGGAAATCCCGGTCAAATCGCCGGAGCAATTGGTGACGCTGGCGTCGATCGTGGAAAAGGAGACCAGC AAGCCGGACGAGCGAAGCCGTGTCTCTGCCGTGTTCGTCAACCGCCTACAGAAGAAGATGCGATTGCAGTCCGACCCGAC GATCATCTACGGGCTCGTCGGCGGCAAGGGCACGCTCGGGCGACAGATCAAGCGCAGCGAAATTCAGCAGCCGTCCCCCT ACAACACCTATGTCATCGACGGTCTGCCGCCGGGCCCGATCGCGAATCCCGGCCGGGCGTCGCTCGAAGCTGCGGCCAAT CCCGCGCGAACGCGCGATCTGTACTTCGTCGCGGACGGCAGCGGCGGTCACGCCTTCAGCGACAGCTATGACCAGCATCT GAAGAACGTCGCCAAGCTGCGGGCGCTGGAGCGCCAGACCCAGAACGACACGATCGAGCCCGCCGAAGATACCCCGCCGA CGGCGACGGTGGCTCCCGACGCGAACGCATCGGTCCCGTCGCCCGCGCCGGTGACGCGACCATCGAAGAACAGCGGCGCA TCCAAGAAGCGAAACGGCGCCGCTCCGGCTGCAGCCGGCCAGGATTAG
Upstream 100 bases:
>100_bases GATTCCACACCGGATGTTCCCACCAAAGACGTGATCCCGAACGCCTCCGGTGCGATCTTGCACGGACCATCCATCAGACC ACAGGAATCAGGTTGCACCG
Downstream 100 bases:
>100_bases TCGTGCGGCTGTTCCCAATGCGCGCCGTGATGGGCTAAGCTCCGCCGTCCACGCGTCACGCGAATCTCAATCCAGCAATC TGCGGAGTCTGTGAGCGATG
Product: aminodeoxychorismate lyase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 415; Mature: 414
Protein sequence:
>415_residues MSERPPISPRSPRAALEPEQLPPPPKRSDRARNPLVIIGNAIITLVLVLMIGAGGIYVYGKQKIEAAGPLQDDKVVNIPQ RAGLGDIAEILQREGVIENNRWVFIGSVLALKARADLKPGEYSFQKEASLRDVIGTIVEGKVVQHAVTIPEGLTSEQIVA RLTDNNILTGSLREIPREGTLLPETYKFPRGTPREQVINRMQQAQKRVLSEVWERRNPEIPVKSPEQLVTLASIVEKETS KPDERSRVSAVFVNRLQKKMRLQSDPTIIYGLVGGKGTLGRQIKRSEIQQPSPYNTYVIDGLPPGPIANPGRASLEAAAN PARTRDLYFVADGSGGHAFSDSYDQHLKNVAKLRALERQTQNDTIEPAEDTPPTATVAPDANASVPSPAPVTRPSKNSGA SKKRNGAAPAAAGQD
Sequences:
>Translated_415_residues MSERPPISPRSPRAALEPEQLPPPPKRSDRARNPLVIIGNAIITLVLVLMIGAGGIYVYGKQKIEAAGPLQDDKVVNIPQ RAGLGDIAEILQREGVIENNRWVFIGSVLALKARADLKPGEYSFQKEASLRDVIGTIVEGKVVQHAVTIPEGLTSEQIVA RLTDNNILTGSLREIPREGTLLPETYKFPRGTPREQVINRMQQAQKRVLSEVWERRNPEIPVKSPEQLVTLASIVEKETS KPDERSRVSAVFVNRLQKKMRLQSDPTIIYGLVGGKGTLGRQIKRSEIQQPSPYNTYVIDGLPPGPIANPGRASLEAAAN PARTRDLYFVADGSGGHAFSDSYDQHLKNVAKLRALERQTQNDTIEPAEDTPPTATVAPDANASVPSPAPVTRPSKNSGA SKKRNGAAPAAAGQD >Mature_414_residues SERPPISPRSPRAALEPEQLPPPPKRSDRARNPLVIIGNAIITLVLVLMIGAGGIYVYGKQKIEAAGPLQDDKVVNIPQR AGLGDIAEILQREGVIENNRWVFIGSVLALKARADLKPGEYSFQKEASLRDVIGTIVEGKVVQHAVTIPEGLTSEQIVAR LTDNNILTGSLREIPREGTLLPETYKFPRGTPREQVINRMQQAQKRVLSEVWERRNPEIPVKSPEQLVTLASIVEKETSK PDERSRVSAVFVNRLQKKMRLQSDPTIIYGLVGGKGTLGRQIKRSEIQQPSPYNTYVIDGLPPGPIANPGRASLEAAANP ARTRDLYFVADGSGGHAFSDSYDQHLKNVAKLRALERQTQNDTIEPAEDTPPTATVAPDANASVPSPAPVTRPSKNSGAS KKRNGAAPAAAGQD
Specific function: Unknown
COG id: COG1559
COG function: function code R; Predicted periplasmic solute-binding protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0755 family [H]
Homologues:
Organism=Escherichia coli, GI1787339, Length=251, Percent_Identity=37.4501992031873, Blast_Score=172, Evalue=4e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003770 [H]
Pfam domain/function: PF02618 ADC_lyase [H]
EC number: NA
Molecular weight: Translated: 45062; Mature: 44931
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSERPPISPRSPRAALEPEQLPPPPKRSDRARNPLVIIGNAIITLVLVLMIGAGGIYVYG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHCCCCEEEEE KQKIEAAGPLQDDKVVNIPQRAGLGDIAEILQREGVIENNRWVFIGSVLALKARADLKPG CCEECCCCCCCCCCEECCHHHCCCHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHCCCCCC EYSFQKEASLRDVIGTIVEGKVVQHAVTIPEGLTSEQIVARLTDNNILTGSLREIPREGT CCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHCCCCEEECHHHHCCCCCC LLPETYKFPRGTPREQVINRMQQAQKRVLSEVWERRNPEIPVKSPEQLVTLASIVEKETS CCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCC KPDERSRVSAVFVNRLQKKMRLQSDPTIIYGLVGGKGTLGRQIKRSEIQQPSPYNTYVID CCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEEC GLPPGPIANPGRASLEAAANPARTRDLYFVADGSGGHAFSDSYDQHLKNVAKLRALERQT CCCCCCCCCCCCHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHH QNDTIEPAEDTPPTATVAPDANASVPSPAPVTRPSKNSGASKKRNGAAPAAAGQD CCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SERPPISPRSPRAALEPEQLPPPPKRSDRARNPLVIIGNAIITLVLVLMIGAGGIYVYG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHCCCCEEEEE KQKIEAAGPLQDDKVVNIPQRAGLGDIAEILQREGVIENNRWVFIGSVLALKARADLKPG CCEECCCCCCCCCCEECCHHHCCCHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHCCCCCC EYSFQKEASLRDVIGTIVEGKVVQHAVTIPEGLTSEQIVARLTDNNILTGSLREIPREGT CCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHCCCCEEECHHHHCCCCCC LLPETYKFPRGTPREQVINRMQQAQKRVLSEVWERRNPEIPVKSPEQLVTLASIVEKETS CCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCC KPDERSRVSAVFVNRLQKKMRLQSDPTIIYGLVGGKGTLGRQIKRSEIQQPSPYNTYVID CCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEEC GLPPGPIANPGRASLEAAANPARTRDLYFVADGSGGHAFSDSYDQHLKNVAKLRALERQT CCCCCCCCCCCCHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHH QNDTIEPAEDTPPTATVAPDANASVPSPAPVTRPSKNSGASKKRNGAAPAAAGQD CCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]