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The map label for this gene is yicC [C]

Identifier: 86749591

GI number: 86749591

Start: 2827614

End: 2828501

Strand: Direct

Name: yicC [C]

Synonym: RPB_2471

Alternate gene names: 86749591

Gene position: 2827614-2828501 (Clockwise)

Preceding gene: 86749590

Following gene: 86749592

Centisome position: 53.03

GC content: 64.08

Gene sequence:

>888_bases
ATGTCTTTGTCGAGCATGACGGGGTTTGCGCGCAGCCACGGCAGCAGCGGCCCGTATTCGTTTGAATGGGAATTGAAGTC
CGTCAACGCCAAGGGCTTCGATTTCCGGCTGCGCATTCCGCAGGGGTGGGACGATATCGAGGCCGGCGTGCGCAAGCGTG
CGGCCGAAGCGCTGTCCCGTGGCACGGTCTACGCCAACCTCACGGTCAAGCGTGCCGATGCGGCATCGACCGTGCGCATC
AACGAGGATGTGCTGAACTCGGTCTTGAGGATCGCGACCGAACTCGCGGGCAGGGTCGATGCGGTGGCGCCGAGCATCGA
CGGTCTGATGTCGATCAAGGGCGTGATCGAACTGTTCGAGCCGGAGGCAGACGAGGCCGAGGAAAAAGCCGCCCGCGGCG
CAGTCGAGGCTGCGTTCACGCAGGCACTCGGCAGCCTGATCGAAATGCGCCAGCGTGAAGGCGCGAGCCTCGGCGGTGTG
CTGTCGCAGCGGCTCGACGAGATCGAAACTTTGGCGAAGAAGGCGGAGGCCGCGCCCGGTCGCAAGCCGGAGGCTATCAA
GGCCCGGCTCGCCGAACAGGTCGCGGCGCTGCTGGAGACGTCGGAGCGTTTCGATCAGGATCGGCTGCATCAGGAAGCCA
TCATGATGGCGACCAAGGCCGACATTCGCGAAGAACTCGACCGCATCGCTTCCCACGTCGCACAGGCCCGCGAGATGCTG
GGCGCGGGCGGCGCCGTCGGCCGTCGGCTCGACTTCCTGTCGCAGGAATTCAATCGCGAGGTGAACACCTGCTGCTCCAA
GTCGATCGATCTCGAACTGACCAACACCGGCCTTGCGATGAAGAACGTGGTCGAGCAGTTCCGCGAGCAAGTGCAGAATC
TGGAGTGA

Upstream 100 bases:

>100_bases
TAGTCGTGCGGCTGTTCCCAATGCGCGCCGTGATGGGCTAAGCTCCGCCGTCCACGCGTCACGCGAATCTCAATCCAGCA
ATCTGCGGAGTCTGTGAGCG

Downstream 100 bases:

>100_bases
GGATGAAGGACGGGGCGGCAGGCAGCCTGAACGGCATCGAGCGGCGCGGATTGATGTTCGTGCTGTCGTCGCCGTCGGGC
GCCGGCAAGACGACGCTCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 294

Protein sequence:

>295_residues
MSLSSMTGFARSHGSSGPYSFEWELKSVNAKGFDFRLRIPQGWDDIEAGVRKRAAEALSRGTVYANLTVKRADAASTVRI
NEDVLNSVLRIATELAGRVDAVAPSIDGLMSIKGVIELFEPEADEAEEKAARGAVEAAFTQALGSLIEMRQREGASLGGV
LSQRLDEIETLAKKAEAAPGRKPEAIKARLAEQVAALLETSERFDQDRLHQEAIMMATKADIREELDRIASHVAQAREML
GAGGAVGRRLDFLSQEFNREVNTCCSKSIDLELTNTGLAMKNVVEQFREQVQNLE

Sequences:

>Translated_295_residues
MSLSSMTGFARSHGSSGPYSFEWELKSVNAKGFDFRLRIPQGWDDIEAGVRKRAAEALSRGTVYANLTVKRADAASTVRI
NEDVLNSVLRIATELAGRVDAVAPSIDGLMSIKGVIELFEPEADEAEEKAARGAVEAAFTQALGSLIEMRQREGASLGGV
LSQRLDEIETLAKKAEAAPGRKPEAIKARLAEQVAALLETSERFDQDRLHQEAIMMATKADIREELDRIASHVAQAREML
GAGGAVGRRLDFLSQEFNREVNTCCSKSIDLELTNTGLAMKNVVEQFREQVQNLE
>Mature_294_residues
SLSSMTGFARSHGSSGPYSFEWELKSVNAKGFDFRLRIPQGWDDIEAGVRKRAAEALSRGTVYANLTVKRADAASTVRIN
EDVLNSVLRIATELAGRVDAVAPSIDGLMSIKGVIELFEPEADEAEEKAARGAVEAAFTQALGSLIEMRQREGASLGGVL
SQRLDEIETLAKKAEAAPGRKPEAIKARLAEQVAALLETSERFDQDRLHQEAIMMATKADIREELDRIASHVAQAREMLG
AGGAVGRRLDFLSQEFNREVNTCCSKSIDLELTNTGLAMKNVVEQFREQVQNLE

Specific function: Unknown

COG id: COG1561

COG function: function code S; Uncharacterized stress-induced protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0701 family [H]

Homologues:

Organism=Escherichia coli, GI1790075, Length=296, Percent_Identity=32.4324324324324, Blast_Score=139, Evalue=2e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005229
- InterPro:   IPR013551
- InterPro:   IPR013527 [H]

Pfam domain/function: PF08340 DUF1732; PF03755 YicC_N [H]

EC number: NA

Molecular weight: Translated: 32223; Mature: 32092

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLSSMTGFARSHGSSGPYSFEWELKSVNAKGFDFRLRIPQGWDDIEAGVRKRAAEALSR
CCCHHHHHHHHHCCCCCCEEEEEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHC
GTVYANLTVKRADAASTVRINEDVLNSVLRIATELAGRVDAVAPSIDGLMSIKGVIELFE
CCEEEEEEEEECCCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
PEADEAEEKAARGAVEAAFTQALGSLIEMRQREGASLGGVLSQRLDEIETLAKKAEAAPG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCC
RKPEAIKARLAEQVAALLETSERFDQDRLHQEAIMMATKADIREELDRIASHVAQAREML
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAGGAVGRRLDFLSQEFNREVNTCCSKSIDLELTNTGLAMKNVVEQFREQVQNLE
HCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SLSSMTGFARSHGSSGPYSFEWELKSVNAKGFDFRLRIPQGWDDIEAGVRKRAAEALSR
CCHHHHHHHHHCCCCCCEEEEEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHC
GTVYANLTVKRADAASTVRINEDVLNSVLRIATELAGRVDAVAPSIDGLMSIKGVIELFE
CCEEEEEEEEECCCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
PEADEAEEKAARGAVEAAFTQALGSLIEMRQREGASLGGVLSQRLDEIETLAKKAEAAPG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCC
RKPEAIKARLAEQVAALLETSERFDQDRLHQEAIMMATKADIREELDRIASHVAQAREML
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAGGAVGRRLDFLSQEFNREVNTCCSKSIDLELTNTGLAMKNVVEQFREQVQNLE
HCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]