Definition | Rhodopseudomonas palustris HaA2, complete genome. |
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Accession | NC_007778 |
Length | 5,331,656 |
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The map label for this gene is 86749575
Identifier: 86749575
GI number: 86749575
Start: 2812319
End: 2812711
Strand: Direct
Name: 86749575
Synonym: RPB_2455
Alternate gene names: NA
Gene position: 2812319-2812711 (Clockwise)
Preceding gene: 86749569
Following gene: 86749576
Centisome position: 52.75
GC content: 67.18
Gene sequence:
>393_bases ATGAAGATTGCCATCCCCACCTCGGATTGGGTCACCGTCAGCGGCCACGCCGGGCAGGCGCGGCAATGGCTGTTGTACGA TCTGGCCGGGCATCGCGGCGACGCGCCGCTGCCGGCGCCGACCCGGGTCGAACTGACCAAGGAGCAGCTTCCGCACTACT TCAAGGACGACGGTCCGCATCCGCTCGACGGCGTCGAACTGATCGTCGCGGGGAGCGCCGGCGACGGCTTCGTCCGTCAC ATGAAGAAGCGCGGCGCCGACGTGCTGCTCACCGGCGAGACCGATCCCGCGACCGCGATCGATCTCATCATCAAGGGCGA GACGCTGCCCGACCAGCGCTTCGACATCACCACGACGCTGTGCCGGCTGCGGGATTTGTTCTCGCGGCATTGA
Upstream 100 bases:
>100_bases GCCGAGGCAGCAATCGATGAGGAAGATTTGGATCAACGCCGTTGCCTGGAAGGCGCGGCATTGTGGCTTCCGATTCTGAG CACAGAGCGGAAGAGCCAAC
Downstream 100 bases:
>100_bases ATCGCCGCATCTCGTCATGGCCGGGCTCGTCCCGGCCATCCACGCCTTAACTTCCTGCGTCTGCTGCAAGACGTGGATGC CCGGCACGAGGCCGGGCATG
Product: hypothetical protein
Products: NA
Alternate protein names: Nitrogenase Accessory Factor; Nitrogen Fixation-Like Protein; Dinitrogenase Iron-Molybdenum Cofactor Biosynthesis Protein
Number of amino acids: Translated: 130; Mature: 130
Protein sequence:
>130_residues MKIAIPTSDWVTVSGHAGQARQWLLYDLAGHRGDAPLPAPTRVELTKEQLPHYFKDDGPHPLDGVELIVAGSAGDGFVRH MKKRGADVLLTGETDPATAIDLIIKGETLPDQRFDITTTLCRLRDLFSRH
Sequences:
>Translated_130_residues MKIAIPTSDWVTVSGHAGQARQWLLYDLAGHRGDAPLPAPTRVELTKEQLPHYFKDDGPHPLDGVELIVAGSAGDGFVRH MKKRGADVLLTGETDPATAIDLIIKGETLPDQRFDITTTLCRLRDLFSRH >Mature_130_residues MKIAIPTSDWVTVSGHAGQARQWLLYDLAGHRGDAPLPAPTRVELTKEQLPHYFKDDGPHPLDGVELIVAGSAGDGFVRH MKKRGADVLLTGETDPATAIDLIIKGETLPDQRFDITTTLCRLRDLFSRH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14307; Mature: 14307
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIAIPTSDWVTVSGHAGQARQWLLYDLAGHRGDAPLPAPTRVELTKEQLPHYFKDDGPH CEEECCCCCCEEEECCCCCCHHEEEEECCCCCCCCCCCCCCEEEECHHHCCCCCCCCCCC PLDGVELIVAGSAGDGFVRHMKKRGADVLLTGETDPATAIDLIIKGETLPDQRFDITTTL CCCCEEEEEECCCCCHHHHHHHHCCCEEEEECCCCCCCEEEEEEECCCCCCCCCHHHHHH CRLRDLFSRH HHHHHHHHCC >Mature Secondary Structure MKIAIPTSDWVTVSGHAGQARQWLLYDLAGHRGDAPLPAPTRVELTKEQLPHYFKDDGPH CEEECCCCCCEEEECCCCCCHHEEEEECCCCCCCCCCCCCCEEEECHHHCCCCCCCCCCC PLDGVELIVAGSAGDGFVRHMKKRGADVLLTGETDPATAIDLIIKGETLPDQRFDITTTL CCCCEEEEEECCCCCHHHHHHHHCCCEEEEECCCCCCCEEEEEEECCCCCCCCCHHHHHH CRLRDLFSRH HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA