| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86749272
Identifier: 86749272
GI number: 86749272
Start: 2441324
End: 2441884
Strand: Reverse
Name: 86749272
Synonym: RPB_2151
Alternate gene names: NA
Gene position: 2441884-2441324 (Counterclockwise)
Preceding gene: 86749275
Following gene: 86749269
Centisome position: 45.8
GC content: 71.84
Gene sequence:
>561_bases ATGAAGCATCCGTCGAGCCGCGCATTCTTTGCATATTGGGACAGCCAGCGCGGCGACGCGCCGGCGCCCGATCGCAGCGA TGTCGAGCCCGGCGCCGTCCGCCAGTTGCTCGGCGACATCTTCGTGCTGTCCAGCGATGCCGCGGCCGGCTACCCGTTCC GCGTCGCCGGAACCCGGCTCAACGCCCTGCTCGGCCGCGATCTCAAAGGCGAAAGCCTGCCCGGCCTGTTCGGCGTCGAC AGCCGTCGCGACTGCGAGGACATTCTCGGGGTCGTCGCCGACGAGTCGCTGGCGCTGGTCGCCGGCGTGACGTCGTCGTC GCCCACCGGCGCGGTCGCCCATCTCGAATTGCTGCTGCTGCCGTTCGCGCCCCGGCTGCACACGCCGCTGACCATGACCG GGCTGCTGGCGCCGCTCGGACCCCGGAGCGCCGGCGAACTCGGCGCGCTGCGGTTGACCACCTGGCGCACGCTCGGCCGG CAGTCCCGCCGGCTGCGGCCGCGGGTGCTGCGCAAATGGGAAGTGGCGCGCGGGCTGATCGTCTATGAAGGGCTGCGCTG A
Upstream 100 bases:
>100_bases CGCTGCACTGCCCCTCCTGCACAACAATTCAGGGGCCCGCGACGCGCGGCACCGGGACAGACCTGTCCCGGGACGCGCCC GGCGCGGGTCAGGGACAGGC
Downstream 100 bases:
>100_bases GCCTGGCCGAATTCGGACCCGGGTGCGGGCCGCTGCATCACCACCGTCGCGCTGCTCCGGAGCGGCAGGACCGCGACCGG CACCCGGTCCGCGCTTCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MKHPSSRAFFAYWDSQRGDAPAPDRSDVEPGAVRQLLGDIFVLSSDAAAGYPFRVAGTRLNALLGRDLKGESLPGLFGVD SRRDCEDILGVVADESLALVAGVTSSSPTGAVAHLELLLLPFAPRLHTPLTMTGLLAPLGPRSAGELGALRLTTWRTLGR QSRRLRPRVLRKWEVARGLIVYEGLR
Sequences:
>Translated_186_residues MKHPSSRAFFAYWDSQRGDAPAPDRSDVEPGAVRQLLGDIFVLSSDAAAGYPFRVAGTRLNALLGRDLKGESLPGLFGVD SRRDCEDILGVVADESLALVAGVTSSSPTGAVAHLELLLLPFAPRLHTPLTMTGLLAPLGPRSAGELGALRLTTWRTLGR QSRRLRPRVLRKWEVARGLIVYEGLR >Mature_186_residues MKHPSSRAFFAYWDSQRGDAPAPDRSDVEPGAVRQLLGDIFVLSSDAAAGYPFRVAGTRLNALLGRDLKGESLPGLFGVD SRRDCEDILGVVADESLALVAGVTSSSPTGAVAHLELLLLPFAPRLHTPLTMTGLLAPLGPRSAGELGALRLTTWRTLGR QSRRLRPRVLRKWEVARGLIVYEGLR
Specific function: Unknown
COG id: COG5388
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20108; Mature: 20108
Theoretical pI: Translated: 10.40; Mature: 10.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHPSSRAFFAYWDSQRGDAPAPDRSDVEPGAVRQLLGDIFVLSSDAAAGYPFRVAGTRL CCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHEEEECCCCCCCCEEECCHHH NALLGRDLKGESLPGLFGVDSRRDCEDILGVVADESLALVAGVTSSSPTGAVAHLELLLL HHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHH PFAPRLHTPLTMTGLLAPLGPRSAGELGALRLTTWRTLGRQSRRLRPRVLRKWEVARGLI CCCCCCCCCEEHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCHHHHHHHHHHCCEE VYEGLR EECCCC >Mature Secondary Structure MKHPSSRAFFAYWDSQRGDAPAPDRSDVEPGAVRQLLGDIFVLSSDAAAGYPFRVAGTRL CCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHEEEECCCCCCCCEEECCHHH NALLGRDLKGESLPGLFGVDSRRDCEDILGVVADESLALVAGVTSSSPTGAVAHLELLLL HHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHH PFAPRLHTPLTMTGLLAPLGPRSAGELGALRLTTWRTLGRQSRRLRPRVLRKWEVARGLI CCCCCCCCCEEHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCHHHHHHHHHHCCEE VYEGLR EECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA