| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is thiE [H]
Identifier: 86749078
GI number: 86749078
Start: 2222731
End: 2223339
Strand: Reverse
Name: thiE [H]
Synonym: RPB_1955
Alternate gene names: 86749078
Gene position: 2223339-2222731 (Counterclockwise)
Preceding gene: 86749079
Following gene: 86749077
Centisome position: 41.7
GC content: 68.47
Gene sequence:
>609_bases ATGCCGTATCCTGATCGCTTCTATCCCGTCGTCGACAGCATCGCGTGGGTCAAACGCCTCGCCGCGCTCGGCGTCGGCAC CGTGCAACTCCGCGCCAAGGACCTCGACGACGGCGCCGCGCTGCAGCTCGTCACCGACGCGCTCGACGCGGTGAAAGGCA CCAGCGTCAGGCTGATCATCAACGACTACTGGCGCGCCGCGATCGTCGCCGGCGCGCAGCATCTGCATCTCGGCCAGGAA GACCTCGCGACCGCCGATCTGCACGAGATCCGCGCCGCCGGGCTGACGCTCGGCCTGTCGACCCACGACGACGCCGAACT CGAAACCGCGCTGGCCGCGCGCCCGGACTACATCGCGCTCGGCCCGATCTTTCCGACCACGCTGAAATCGATGCGCTTCG CCCCGCAGGGCATCCCGAAGATCACCGACTGGAAGCAGCGCGTCGGCAGCATCCCGCTGGTGGCGATCGGCGGCATCAAG CTGGAACAGGCCGAAGAGATCTTTGCCGCCGGCGCCGACTCGATCGCGGTGGTGAGCGACGTGACGCAGAACCCCGATCC AGACGCCCGCGTCCGCGCCTGGCTCGATTTCGTCGCGGAGACGGCGTGA
Upstream 100 bases:
>100_bases CTCGCGGTCGAAGCCGGCCGCACCGGATTCGAGGCCGGGCTGATGGGCGCCCGCGATTTCGCCTCCCCCTCAACCCCCGT GATTGGGACCCCGTTCTGGC
Downstream 100 bases:
>100_bases GCCGCGGCACAAAGGATGTCGCCGTCACCCTGAGGTGCGAGCCGTCTTCGGCTCGCCTCGAAGGGCGACGGCGGGAGCAC TGAATTCGTTGCGGTCATCC
Product: thiamine-phosphate pyrophosphorylase
Products: NA
Alternate protein names: TMP pyrophosphorylase; TMP-PPase; Thiamine-phosphate synthase [H]
Number of amino acids: Translated: 202; Mature: 201
Protein sequence:
>202_residues MPYPDRFYPVVDSIAWVKRLAALGVGTVQLRAKDLDDGAALQLVTDALDAVKGTSVRLIINDYWRAAIVAGAQHLHLGQE DLATADLHEIRAAGLTLGLSTHDDAELETALAARPDYIALGPIFPTTLKSMRFAPQGIPKITDWKQRVGSIPLVAIGGIK LEQAEEIFAAGADSIAVVSDVTQNPDPDARVRAWLDFVAETA
Sequences:
>Translated_202_residues MPYPDRFYPVVDSIAWVKRLAALGVGTVQLRAKDLDDGAALQLVTDALDAVKGTSVRLIINDYWRAAIVAGAQHLHLGQE DLATADLHEIRAAGLTLGLSTHDDAELETALAARPDYIALGPIFPTTLKSMRFAPQGIPKITDWKQRVGSIPLVAIGGIK LEQAEEIFAAGADSIAVVSDVTQNPDPDARVRAWLDFVAETA >Mature_201_residues PYPDRFYPVVDSIAWVKRLAALGVGTVQLRAKDLDDGAALQLVTDALDAVKGTSVRLIINDYWRAAIVAGAQHLHLGQED LATADLHEIRAAGLTLGLSTHDDAELETALAARPDYIALGPIFPTTLKSMRFAPQGIPKITDWKQRVGSIPLVAIGGIKL EQAEEIFAAGADSIAVVSDVTQNPDPDARVRAWLDFVAETA
Specific function: Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) [H]
COG id: COG0352
COG function: function code H; Thiamine monophosphate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TMP-PPase family [H]
Homologues:
Organism=Escherichia coli, GI1790426, Length=186, Percent_Identity=51.6129032258064, Blast_Score=177, Evalue=6e-46, Organism=Saccharomyces cerevisiae, GI6325042, Length=202, Percent_Identity=30.1980198019802, Blast_Score=65, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR022998 - InterPro: IPR003733 [H]
Pfam domain/function: PF02581 TMP-TENI [H]
EC number: =2.5.1.3 [H]
Molecular weight: Translated: 21675; Mature: 21544
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPYPDRFYPVVDSIAWVKRLAALGVGTVQLRAKDLDDGAALQLVTDALDAVKGTSVRLII CCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEE NDYWRAAIVAGAQHLHLGQEDLATADLHEIRAAGLTLGLSTHDDAELETALAARPDYIAL HHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHCEEEECCCCCCHHHHHHHHCCCCEEEE GPIFPTTLKSMRFAPQGIPKITDWKQRVGSIPLVAIGGIKLEQAEEIFAAGADSIAVVSD CCCCHHHHHHHHCCCCCCCCCCHHHHHHCCCCEEEECCEEHHHHHHHHHCCCCCEEEEHH VTQNPDPDARVRAWLDFVAETA CCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure PYPDRFYPVVDSIAWVKRLAALGVGTVQLRAKDLDDGAALQLVTDALDAVKGTSVRLII CCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEE NDYWRAAIVAGAQHLHLGQEDLATADLHEIRAAGLTLGLSTHDDAELETALAARPDYIAL HHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHCEEEECCCCCCHHHHHHHHCCCCEEEE GPIFPTTLKSMRFAPQGIPKITDWKQRVGSIPLVAIGGIKLEQAEEIFAAGADSIAVVSD CCCCHHHHHHHHCCCCCCCCCCHHHHHHCCCCEEEECCEEHHHHHHHHHCCCCCEEEEHH VTQNPDPDARVRAWLDFVAETA CCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9371431 [H]