Click here to switch to the map view.

The map label for this gene is 86748980

Identifier: 86748980

GI number: 86748980

Start: 2122522

End: 2122749

Strand: Reverse

Name: 86748980

Synonym: RPB_1857

Alternate gene names: NA

Gene position: 2122749-2122522 (Counterclockwise)

Preceding gene: 86748982

Following gene: 86748974

Centisome position: 39.81

GC content: 62.28

Gene sequence:

>228_bases
GTGCTGAACAAATTTGGCCCCTCGGGCTCGGGCGAGGCGCAGGTGCAGTATCTGGATGGAGATTTCCGTGTGATCTCTCC
GGGCACCTATGTGCGCTGCGCGGTCACCGGGGTGCAGATTCCGCTCGACGAGCTGAAATATTGGAGCGTCGATCTCAAGG
AAGCCTACGCCACGCCGATCGCGGTGCTGCAGCGGCATTTTCCAGCGGCGGCAAAGCCGCTGGGCTGA

Upstream 100 bases:

>100_bases
GTGGTTTGCAACGTGGCTCATCCGTTCTATCTGTGGGAGATATCGACCGCATGCGGCCGGGGCAACAGCCATCGCATACG
GGTATTTCAGGAGATCAGCC

Downstream 100 bases:

>100_bases
TACGCGCGCTATCCGGCGCGCGGCTTGGTGCGCGCGCGATTGATCTGCTCCAGCAGAAACAACCGCAAGCTGGGTTCGTC
CTCGACCGCCAATGTCACCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 75; Mature: 75

Protein sequence:

>75_residues
MLNKFGPSGSGEAQVQYLDGDFRVISPGTYVRCAVTGVQIPLDELKYWSVDLKEAYATPIAVLQRHFPAAAKPLG

Sequences:

>Translated_75_residues
MLNKFGPSGSGEAQVQYLDGDFRVISPGTYVRCAVTGVQIPLDELKYWSVDLKEAYATPIAVLQRHFPAAAKPLG
>Mature_75_residues
MLNKFGPSGSGEAQVQYLDGDFRVISPGTYVRCAVTGVQIPLDELKYWSVDLKEAYATPIAVLQRHFPAAAKPLG

Specific function: Unknown

COG id: COG3908

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8153; Mature: 8153

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNKFGPSGSGEAQVQYLDGDFRVISPGTYVRCAVTGVQIPLDELKYWSVDLKEAYATPI
CCCCCCCCCCCCEEEEEECCCEEEECCCCEEEEEEECCCCCHHHCEEECCCHHHHHCCHH
AVLQRHFPAAAKPLG
HHHHHCCCCCCCCCC
>Mature Secondary Structure
MLNKFGPSGSGEAQVQYLDGDFRVISPGTYVRCAVTGVQIPLDELKYWSVDLKEAYATPI
CCCCCCCCCCCCEEEEEECCCEEEECCCCEEEEEEECCCCCHHHCEEECCCHHHHHCCHH
AVLQRHFPAAAKPLG
HHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA