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The map label for this gene is 86748944

Identifier: 86748944

GI number: 86748944

Start: 2084348

End: 2084809

Strand: Reverse

Name: 86748944

Synonym: RPB_1821

Alternate gene names: NA

Gene position: 2084809-2084348 (Counterclockwise)

Preceding gene: 86748945

Following gene: 86748916

Centisome position: 39.1

GC content: 62.12

Gene sequence:

>462_bases
ATGGCCATCGCCGCTGACGGCTTCCAGGTTCTCAAGCGCATCGGCAAGAATGCCGAGATCTTCCGGCCGATTCGCGCCGA
GGTCGACAAGGTCGCGCTGAGCCTCGTAATCAAGGCGCTCAAGACAAAGTCGCTCGATGTGACGGCGTTGCGCGACATTT
CCGGATCGCTCGGCGAGGATTTCTCGCTGATCGTCGAGGGACTGAAAGACGCCGACGTCAAGTCGATCGTCACCAAGCTC
GACAAGCACCATCCGGACGCGAAATCCGGGACTGCGGCTTGGCGGCGTCAGCATCTGGCGGCGCTCGCCGATGGGTCCGC
CGAGCCGTCTTCGCCTCCGGCGAAGCCTGCCAAGAAGGCCAAAGCCGCCAAGGCTTCTTCGAAGACCAAGAAAGCCGAGC
CGGAGCGTCTGTCGAGCGAAGTGATGGATCTGTTCCGCGCGGGCGGCAAATCGAAATCGTGA

Upstream 100 bases:

>100_bases
CTCGGCAAGATCACGCAGTTCCCGAGTTTTTCGCAGAAATGGGGTCAGGTCGTTACCCCGCTTCTCGCCGATCTCGTCAA
AGAAGTAGAAGAGGTGCTGC

Downstream 100 bases:

>100_bases
CCCACACGCGATGCGAAGGCCGGGACCTTTCGGCCCCGGTCCAACCGACCTAGTCGCGTCACACCGCTCCAACGTAAACG
CCGGGCCGTCGCTGCTTCCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 153; Mature: 152

Protein sequence:

>153_residues
MAIAADGFQVLKRIGKNAEIFRPIRAEVDKVALSLVIKALKTKSLDVTALRDISGSLGEDFSLIVEGLKDADVKSIVTKL
DKHHPDAKSGTAAWRRQHLAALADGSAEPSSPPAKPAKKAKAAKASSKTKKAEPERLSSEVMDLFRAGGKSKS

Sequences:

>Translated_153_residues
MAIAADGFQVLKRIGKNAEIFRPIRAEVDKVALSLVIKALKTKSLDVTALRDISGSLGEDFSLIVEGLKDADVKSIVTKL
DKHHPDAKSGTAAWRRQHLAALADGSAEPSSPPAKPAKKAKAAKASSKTKKAEPERLSSEVMDLFRAGGKSKS
>Mature_152_residues
AIAADGFQVLKRIGKNAEIFRPIRAEVDKVALSLVIKALKTKSLDVTALRDISGSLGEDFSLIVEGLKDADVKSIVTKLD
KHHPDAKSGTAAWRRQHLAALADGSAEPSSPPAKPAKKAKAAKASSKTKKAEPERLSSEVMDLFRAGGKSKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16257; Mature: 16126

Theoretical pI: Translated: 10.67; Mature: 10.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIAADGFQVLKRIGKNAEIFRPIRAEVDKVALSLVIKALKTKSLDVTALRDISGSLGED
CCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCH
FSLIVEGLKDADVKSIVTKLDKHHPDAKSGTAAWRRQHLAALADGSAEPSSPPAKPAKKA
HHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
KAAKASSKTKKAEPERLSSEVMDLFRAGGKSKS
HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
AIAADGFQVLKRIGKNAEIFRPIRAEVDKVALSLVIKALKTKSLDVTALRDISGSLGED
CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCH
FSLIVEGLKDADVKSIVTKLDKHHPDAKSGTAAWRRQHLAALADGSAEPSSPPAKPAKKA
HHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
KAAKASSKTKKAEPERLSSEVMDLFRAGGKSKS
HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA