| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is rhlE [H]
Identifier: 86748916
GI number: 86748916
Start: 2052451
End: 2053926
Strand: Reverse
Name: rhlE [H]
Synonym: RPB_1793
Alternate gene names: 86748916
Gene position: 2053926-2052451 (Counterclockwise)
Preceding gene: 86748944
Following gene: 86748915
Centisome position: 38.52
GC content: 68.9
Gene sequence:
>1476_bases ATGGAAAGAACCAATCTTTTGACCTCGTTTCAGGATTTCGGCCTCGCCGATCCCATCTCCCGTGCGCTTCAGGAAGAAAA TTACACCGTCCCGACGCCGATCCAGGCGCAGACCATTCCCCTCGCCCTCGCCGGTCGCGACGTCGTCGGCATCGCCCAGA CCGGCACCGGCAAGACCGCGTCCTTCGCGCTGCCGATCCTGCACCGCATCCTTGAAAACCGCATCAAGCCGCAGCCGAAG ACCTGCCGCGTCCTGGTGCTGAGCCCGACCCGCGAACTCTCCGGGCAGATCCTCGACAGCTTCAACGCCTATGGCCGCCA CATCCGCCTCAGCGCGACGCTGGCGATCGGCGGCGTGCCGATGGGCCGCCAGGTCCGCTCGCTGATGCAGGGCGTGGAAG TGCTGGTCGCCACCCCGGGCCGCCTGCTCGACCTCGTGCAGAGCAACGCGCTGCGCCTCGGCCAGGTCGAGTTCCTGGTG CTCGACGAAGCCGACCGCATGCTCGACATGGGCTTCATCAACGACATCCGGAAGATCGTCGCGAAACTCCCGATCAAGCG CCAGACGCTGTTCTTCTCGGCCACCATGCCGAAGGACATCGCCGACCTCGCCGAGCAGATGCTGCGCGATCCGGCCCGCG TCGCGGTGACGCCGGTGGCCTCCACCGTCGAGCGCATCAACCAGCGCGTGATCCATCTCGATCACTCCGCCAAGCCGGCG ATGCTCGCCACCATCCTGCAGCAGGACGGCGTCAACCAGGCGCTGGTGTTCACGCGCACCAAGCACGGCGCCGACAAGGT GGTGAAGGGCCTGCAGCGCGCCGGCATCACCGCCGACGCCATCCACGGCAACAAATCGCAGAACTATCGCGAGCGCGTGC TCGCGGCGTTCCGTACCGGCGAACTGCGCACGCTGGTCGCCACCGATATCGCCGCCCGCGGCATCGATGTCGACGGCGTC TCCCACGTCGTCAATTTCGACCTGCCGAACATTCCCGAGACCTACGTCCACCGGATCGGCCGCACCGCGCGCGCCGGCGC CGAGGGCACCGCGATCTCGCTGTGCGCCGGCGGCGAAGAGACCGGCTATCTGCGCGACATCGAGAAGCTGATCCGGATCG CGCTGCCGAAGGAAGACCATCGCACCCCGGGCGCGAAGCCCGCGCCGTCCACCGCGCCGCAGCGTGGCGGCCAGCGCAAC GGCCAGCAGCGCAATGGCCAGCAGCGCAGCGGCGGCCAGCGCAACGGCGCCGCACCGCACGCGGCCCGCGGCGACGCTGC TCCCGGATCGAACGACCCGCGCCGCCCGCGACGCGCCGGCGGCCCGAATGCCGGACGCAACCCGGACGCGGCCCGGCACG AACCGGCGGTACGGCCCCAGCACGGCGGACAGGCCGAAGGCCTGCAGGGCGTCGCATTTTTGCAGCGCAAGAATGATCGC CCCGCAAAGACCACCAATCAACGCCCGCAACGCTGA
Upstream 100 bases:
>100_bases TCTGGCTCGTCTTTCAGCCGATTAGAGCCGACGCTCCAAACACGCGAGCGTCCCGGTTTGCGCAGCACCCGACCAAAGCC GTCGGGCGGCTGCTTTCACC
Downstream 100 bases:
>100_bases TCAAGACCGATCTGGAGATCACGATGGCTAAAGAAGAGCTGATCCAGTTCGAAGGACTGGTGACCGAAATCCTTCCCGAC GCGCGGTATCGTGTCCAGCT
Product: DEAD/DEAH box helicase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 491; Mature: 491
Protein sequence:
>491_residues MERTNLLTSFQDFGLADPISRALQEENYTVPTPIQAQTIPLALAGRDVVGIAQTGTGKTASFALPILHRILENRIKPQPK TCRVLVLSPTRELSGQILDSFNAYGRHIRLSATLAIGGVPMGRQVRSLMQGVEVLVATPGRLLDLVQSNALRLGQVEFLV LDEADRMLDMGFINDIRKIVAKLPIKRQTLFFSATMPKDIADLAEQMLRDPARVAVTPVASTVERINQRVIHLDHSAKPA MLATILQQDGVNQALVFTRTKHGADKVVKGLQRAGITADAIHGNKSQNYRERVLAAFRTGELRTLVATDIAARGIDVDGV SHVVNFDLPNIPETYVHRIGRTARAGAEGTAISLCAGGEETGYLRDIEKLIRIALPKEDHRTPGAKPAPSTAPQRGGQRN GQQRNGQQRSGGQRNGAAPHAARGDAAPGSNDPRRPRRAGGPNAGRNPDAARHEPAVRPQHGGQAEGLQGVAFLQRKNDR PAKTTNQRPQR
Sequences:
>Translated_491_residues MERTNLLTSFQDFGLADPISRALQEENYTVPTPIQAQTIPLALAGRDVVGIAQTGTGKTASFALPILHRILENRIKPQPK TCRVLVLSPTRELSGQILDSFNAYGRHIRLSATLAIGGVPMGRQVRSLMQGVEVLVATPGRLLDLVQSNALRLGQVEFLV LDEADRMLDMGFINDIRKIVAKLPIKRQTLFFSATMPKDIADLAEQMLRDPARVAVTPVASTVERINQRVIHLDHSAKPA MLATILQQDGVNQALVFTRTKHGADKVVKGLQRAGITADAIHGNKSQNYRERVLAAFRTGELRTLVATDIAARGIDVDGV SHVVNFDLPNIPETYVHRIGRTARAGAEGTAISLCAGGEETGYLRDIEKLIRIALPKEDHRTPGAKPAPSTAPQRGGQRN GQQRNGQQRSGGQRNGAAPHAARGDAAPGSNDPRRPRRAGGPNAGRNPDAARHEPAVRPQHGGQAEGLQGVAFLQRKNDR PAKTTNQRPQR >Mature_491_residues MERTNLLTSFQDFGLADPISRALQEENYTVPTPIQAQTIPLALAGRDVVGIAQTGTGKTASFALPILHRILENRIKPQPK TCRVLVLSPTRELSGQILDSFNAYGRHIRLSATLAIGGVPMGRQVRSLMQGVEVLVATPGRLLDLVQSNALRLGQVEFLV LDEADRMLDMGFINDIRKIVAKLPIKRQTLFFSATMPKDIADLAEQMLRDPARVAVTPVASTVERINQRVIHLDHSAKPA MLATILQQDGVNQALVFTRTKHGADKVVKGLQRAGITADAIHGNKSQNYRERVLAAFRTGELRTLVATDIAARGIDVDGV SHVVNFDLPNIPETYVHRIGRTARAGAEGTAISLCAGGEETGYLRDIEKLIRIALPKEDHRTPGAKPAPSTAPQRGGQRN GQQRNGQQRSGGQRNGAAPHAARGDAAPGSNDPRRPRRAGGPNAGRNPDAARHEPAVRPQHGGQAEGLQGVAFLQRKNDR PAKTTNQRPQR
Specific function: Acts as an ATP-dependent RNA helicase, able to unwind ds-RNA [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI148613856, Length=375, Percent_Identity=43.2, Blast_Score=286, Evalue=4e-77, Organism=Homo sapiens, GI38201710, Length=375, Percent_Identity=43.2, Blast_Score=286, Evalue=4e-77, Organism=Homo sapiens, GI301171467, Length=369, Percent_Identity=42.5474254742547, Blast_Score=271, Evalue=7e-73, Organism=Homo sapiens, GI87196351, Length=369, Percent_Identity=42.5474254742547, Blast_Score=271, Evalue=8e-73, Organism=Homo sapiens, GI301171475, Length=369, Percent_Identity=42.5474254742547, Blast_Score=271, Evalue=1e-72, Organism=Homo sapiens, GI4758138, Length=356, Percent_Identity=41.5730337078652, Blast_Score=271, Evalue=2e-72, Organism=Homo sapiens, GI169881239, Length=366, Percent_Identity=42.3497267759563, Blast_Score=268, Evalue=1e-71, Organism=Homo sapiens, GI13514809, Length=366, Percent_Identity=42.3497267759563, Blast_Score=268, Evalue=1e-71, Organism=Homo sapiens, GI216548263, Length=359, Percent_Identity=40.1114206128134, Blast_Score=267, Evalue=2e-71, Organism=Homo sapiens, GI13518015, Length=359, Percent_Identity=40.1114206128134, Blast_Score=267, Evalue=2e-71, Organism=Homo sapiens, GI262231852, Length=359, Percent_Identity=40.1114206128134, Blast_Score=267, Evalue=2e-71, Organism=Homo sapiens, GI262118318, Length=359, Percent_Identity=40.1114206128134, Blast_Score=266, Evalue=3e-71, Organism=Homo sapiens, GI20149629, Length=369, Percent_Identity=39.2953929539295, Blast_Score=264, Evalue=1e-70, Organism=Homo sapiens, GI41327771, Length=380, Percent_Identity=37.6315789473684, Blast_Score=259, Evalue=5e-69, Organism=Homo sapiens, GI224593278, Length=366, Percent_Identity=39.6174863387978, Blast_Score=257, Evalue=2e-68, Organism=Homo sapiens, GI45446747, Length=350, Percent_Identity=38.2857142857143, Blast_Score=257, Evalue=2e-68, Organism=Homo sapiens, GI45446743, Length=350, Percent_Identity=38.2857142857143, Blast_Score=257, Evalue=2e-68, Organism=Homo sapiens, GI21071032, Length=375, Percent_Identity=38.9333333333333, Blast_Score=255, Evalue=7e-68, Organism=Homo sapiens, GI222352149, Length=353, Percent_Identity=39.6600566572238, Blast_Score=249, Evalue=4e-66, Organism=Homo sapiens, GI164419743, Length=367, Percent_Identity=36.7847411444142, Blast_Score=241, Evalue=1e-63, Organism=Homo sapiens, GI51094101, Length=367, Percent_Identity=36.7847411444142, Blast_Score=241, Evalue=1e-63, Organism=Homo sapiens, GI7661920, Length=369, Percent_Identity=34.6883468834688, Blast_Score=238, Evalue=1e-62, Organism=Homo sapiens, GI188035877, Length=375, Percent_Identity=36.5333333333333, Blast_Score=237, Evalue=2e-62, Organism=Homo sapiens, GI41327773, Length=374, Percent_Identity=35.5614973262032, Blast_Score=234, Evalue=2e-61, Organism=Homo sapiens, GI31542656, Length=356, Percent_Identity=37.3595505617978, Blast_Score=230, Evalue=2e-60, Organism=Homo sapiens, GI41327776, Length=369, Percent_Identity=35.7723577235772, Blast_Score=223, Evalue=4e-58, Organism=Homo sapiens, GI55749865, Length=327, Percent_Identity=37.0030581039755, Blast_Score=221, Evalue=2e-57, Organism=Homo sapiens, GI13514831, Length=366, Percent_Identity=37.7049180327869, Blast_Score=221, Evalue=2e-57, Organism=Homo sapiens, GI164664518, Length=361, Percent_Identity=32.409972299169, Blast_Score=220, Evalue=2e-57, Organism=Homo sapiens, GI4503529, Length=374, Percent_Identity=35.8288770053476, Blast_Score=217, Evalue=2e-56, Organism=Homo sapiens, GI83700235, Length=371, Percent_Identity=35.5795148247978, Blast_Score=210, Evalue=2e-54, Organism=Homo sapiens, GI38327634, Length=354, Percent_Identity=35.0282485875706, Blast_Score=200, Evalue=2e-51, Organism=Homo sapiens, GI50659095, Length=395, Percent_Identity=34.4303797468354, Blast_Score=200, Evalue=2e-51, Organism=Homo sapiens, GI13129006, Length=376, Percent_Identity=34.0425531914894, Blast_Score=199, Evalue=6e-51, Organism=Homo sapiens, GI256223453, Length=392, Percent_Identity=32.3979591836735, Blast_Score=198, Evalue=1e-50, Organism=Homo sapiens, GI41327779, Length=357, Percent_Identity=35.5742296918768, Blast_Score=188, Evalue=1e-47, Organism=Homo sapiens, GI21040371, Length=378, Percent_Identity=30.6878306878307, Blast_Score=186, Evalue=6e-47, Organism=Homo sapiens, GI38569505, Length=355, Percent_Identity=31.830985915493, Blast_Score=181, Evalue=1e-45, Organism=Homo sapiens, GI38569503, Length=355, Percent_Identity=31.830985915493, Blast_Score=180, Evalue=2e-45, Organism=Homo sapiens, GI4758112, Length=378, Percent_Identity=28.5714285714286, Blast_Score=176, Evalue=4e-44, Organism=Homo sapiens, GI18375623, Length=378, Percent_Identity=28.5714285714286, Blast_Score=176, Evalue=4e-44, Organism=Homo sapiens, GI164419732, Length=338, Percent_Identity=30.7692307692308, Blast_Score=158, Evalue=1e-38, Organism=Homo sapiens, GI4826686, Length=346, Percent_Identity=30.635838150289, Blast_Score=156, Evalue=5e-38, Organism=Homo sapiens, GI17505907, Length=389, Percent_Identity=30.5912596401028, Blast_Score=155, Evalue=7e-38, Organism=Homo sapiens, GI9506931, Length=400, Percent_Identity=29.5, Blast_Score=155, Evalue=1e-37, Organism=Homo sapiens, GI6005743, Length=379, Percent_Identity=28.7598944591029, Blast_Score=154, Evalue=3e-37, Organism=Homo sapiens, GI8922886, Length=377, Percent_Identity=28.6472148541114, Blast_Score=153, Evalue=3e-37, Organism=Homo sapiens, GI154759257, Length=405, Percent_Identity=28.641975308642, Blast_Score=151, Evalue=1e-36, Organism=Homo sapiens, GI62241022, Length=358, Percent_Identity=29.608938547486, Blast_Score=150, Evalue=2e-36, Organism=Homo sapiens, GI256773275, Length=394, Percent_Identity=32.994923857868, Blast_Score=145, Evalue=6e-35, Organism=Homo sapiens, GI9966805, Length=341, Percent_Identity=31.9648093841642, Blast_Score=142, Evalue=7e-34, Organism=Homo sapiens, GI62241024, Length=338, Percent_Identity=29.2899408284024, Blast_Score=141, Evalue=1e-33, Organism=Homo sapiens, GI20336298, Length=196, Percent_Identity=36.2244897959184, Blast_Score=114, Evalue=3e-25, Organism=Escherichia coli, GI1787016, Length=386, Percent_Identity=50, Blast_Score=365, Evalue=1e-102, Organism=Escherichia coli, GI87082221, Length=371, Percent_Identity=41.5094339622642, Blast_Score=285, Evalue=7e-78, Organism=Escherichia coli, GI1790214, Length=428, Percent_Identity=37.8504672897196, Blast_Score=261, Evalue=8e-71, Organism=Escherichia coli, GI1788930, Length=355, Percent_Identity=42.2535211267606, Blast_Score=244, Evalue=8e-66, Organism=Escherichia coli, GI1787605, Length=387, Percent_Identity=38.7596899224806, Blast_Score=236, Evalue=2e-63, Organism=Escherichia coli, GI48994977, Length=377, Percent_Identity=26.790450928382, Blast_Score=74, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17555296, Length=356, Percent_Identity=40.1685393258427, Blast_Score=263, Evalue=2e-70, Organism=Caenorhabditis elegans, GI32565321, Length=399, Percent_Identity=37.844611528822, Blast_Score=261, Evalue=4e-70, Organism=Caenorhabditis elegans, GI17510307, Length=382, Percent_Identity=42.1465968586387, Blast_Score=258, Evalue=4e-69, Organism=Caenorhabditis elegans, GI17510309, Length=382, Percent_Identity=42.1465968586387, Blast_Score=258, Evalue=4e-69, Organism=Caenorhabditis elegans, GI71995514, Length=382, Percent_Identity=42.1465968586387, Blast_Score=258, Evalue=5e-69, Organism=Caenorhabditis elegans, GI115533224, Length=332, Percent_Identity=41.566265060241, Blast_Score=252, Evalue=4e-67, Organism=Caenorhabditis elegans, GI17507945, Length=373, Percent_Identity=38.6058981233244, Blast_Score=251, Evalue=9e-67, Organism=Caenorhabditis elegans, GI71995718, Length=369, Percent_Identity=40.1084010840108, Blast_Score=243, Evalue=2e-64, Organism=Caenorhabditis elegans, GI17507121, Length=369, Percent_Identity=35.7723577235772, Blast_Score=241, Evalue=5e-64, Organism=Caenorhabditis elegans, GI17510559, Length=393, Percent_Identity=36.1323155216285, Blast_Score=241, Evalue=7e-64, Organism=Caenorhabditis elegans, GI71995724, Length=369, Percent_Identity=35.7723577235772, Blast_Score=240, Evalue=1e-63, Organism=Caenorhabditis elegans, GI86570094, Length=353, Percent_Identity=37.3937677053824, Blast_Score=236, Evalue=1e-62, Organism=Caenorhabditis elegans, GI71987143, Length=373, Percent_Identity=34.8525469168901, Blast_Score=232, Evalue=3e-61, Organism=Caenorhabditis elegans, GI17537549, Length=391, Percent_Identity=37.0843989769821, Blast_Score=228, Evalue=5e-60, Organism=Caenorhabditis elegans, GI71999644, Length=365, Percent_Identity=35.8904109589041, Blast_Score=226, Evalue=2e-59, Organism=Caenorhabditis elegans, GI71999646, Length=365, Percent_Identity=35.8904109589041, Blast_Score=226, Evalue=2e-59, Organism=Caenorhabditis elegans, GI17552114, Length=365, Percent_Identity=32.3287671232877, Blast_Score=222, Evalue=3e-58, Organism=Caenorhabditis elegans, GI115532548, Length=355, Percent_Identity=35.4929577464789, Blast_Score=219, Evalue=2e-57, Organism=Caenorhabditis elegans, GI17552642, Length=502, Percent_Identity=32.8685258964143, Blast_Score=219, Evalue=2e-57, Organism=Caenorhabditis elegans, GI17509811, Length=365, Percent_Identity=34.2465753424658, Blast_Score=219, Evalue=3e-57, Organism=Caenorhabditis elegans, GI115532546, Length=372, Percent_Identity=34.6774193548387, Blast_Score=219, Evalue=3e-57, Organism=Caenorhabditis elegans, GI17507881, Length=368, Percent_Identity=35.054347826087, Blast_Score=218, Evalue=6e-57, Organism=Caenorhabditis elegans, GI17507879, Length=390, Percent_Identity=33.5897435897436, Blast_Score=213, Evalue=2e-55, Organism=Caenorhabditis elegans, GI17507877, Length=368, Percent_Identity=33.695652173913, Blast_Score=208, Evalue=5e-54, Organism=Caenorhabditis elegans, GI71982858, Length=374, Percent_Identity=29.6791443850267, Blast_Score=189, Evalue=2e-48, Organism=Caenorhabditis elegans, GI193208216, Length=379, Percent_Identity=33.245382585752, Blast_Score=182, Evalue=3e-46, Organism=Caenorhabditis elegans, GI71990816, Length=354, Percent_Identity=32.4858757062147, Blast_Score=179, Evalue=3e-45, Organism=Caenorhabditis elegans, GI17505370, Length=353, Percent_Identity=34.5609065155807, Blast_Score=178, Evalue=7e-45, Organism=Caenorhabditis elegans, GI193206561, Length=350, Percent_Identity=32.2857142857143, Blast_Score=173, Evalue=1e-43, Organism=Caenorhabditis elegans, GI17508543, Length=386, Percent_Identity=30.3108808290155, Blast_Score=172, Evalue=5e-43, Organism=Caenorhabditis elegans, GI17556951, Length=371, Percent_Identity=30.4582210242588, Blast_Score=163, Evalue=2e-40, Organism=Caenorhabditis elegans, GI17536101, Length=403, Percent_Identity=29.0322580645161, Blast_Score=154, Evalue=7e-38, Organism=Caenorhabditis elegans, GI17536099, Length=403, Percent_Identity=29.0322580645161, Blast_Score=154, Evalue=8e-38, Organism=Caenorhabditis elegans, GI17536103, Length=400, Percent_Identity=29.25, Blast_Score=154, Evalue=1e-37, Organism=Caenorhabditis elegans, GI17507641, Length=393, Percent_Identity=29.0076335877863, Blast_Score=153, Evalue=2e-37, Organism=Caenorhabditis elegans, GI32564046, Length=380, Percent_Identity=29.2105263157895, Blast_Score=146, Evalue=2e-35, Organism=Caenorhabditis elegans, GI25148203, Length=401, Percent_Identity=27.1820448877805, Blast_Score=145, Evalue=4e-35, Organism=Caenorhabditis elegans, GI17553716, Length=379, Percent_Identity=27.7044854881267, Blast_Score=142, Evalue=3e-34, Organism=Caenorhabditis elegans, GI25148291, Length=336, Percent_Identity=26.7857142857143, Blast_Score=132, Evalue=6e-31, Organism=Caenorhabditis elegans, GI71997889, Length=395, Percent_Identity=27.3417721518987, Blast_Score=121, Evalue=8e-28, Organism=Caenorhabditis elegans, GI71982862, Length=206, Percent_Identity=31.5533980582524, Blast_Score=115, Evalue=5e-26, Organism=Caenorhabditis elegans, GI17557982, Length=381, Percent_Identity=25.7217847769029, Blast_Score=94, Evalue=2e-19, Organism=Caenorhabditis elegans, GI71987152, Length=78, Percent_Identity=48.7179487179487, Blast_Score=82, Evalue=6e-16, Organism=Saccharomyces cerevisiae, GI6324217, Length=392, Percent_Identity=43.6224489795918, Blast_Score=288, Evalue=1e-78, Organism=Saccharomyces cerevisiae, GI6324778, Length=426, Percent_Identity=37.5586854460094, Blast_Score=269, Evalue=7e-73, Organism=Saccharomyces cerevisiae, GI6325138, Length=355, Percent_Identity=40.8450704225352, Blast_Score=267, Evalue=3e-72, Organism=Saccharomyces cerevisiae, GI6321856, Length=372, Percent_Identity=39.5161290322581, Blast_Score=257, Evalue=3e-69, Organism=Saccharomyces cerevisiae, GI6321360, Length=362, Percent_Identity=40.0552486187845, Blast_Score=246, Evalue=8e-66, Organism=Saccharomyces cerevisiae, GI6320224, Length=372, Percent_Identity=35.4838709677419, Blast_Score=238, Evalue=1e-63, Organism=Saccharomyces cerevisiae, GI6323021, Length=364, Percent_Identity=35.7142857142857, Blast_Score=233, Evalue=3e-62, Organism=Saccharomyces cerevisiae, GI6320173, Length=418, Percent_Identity=33.0143540669856, Blast_Score=230, Evalue=3e-61, Organism=Saccharomyces cerevisiae, GI6320041, Length=346, Percent_Identity=34.393063583815, Blast_Score=226, Evalue=6e-60, Organism=Saccharomyces cerevisiae, GI6320449, Length=395, Percent_Identity=34.1772151898734, Blast_Score=214, Evalue=3e-56, Organism=Saccharomyces cerevisiae, GI6323947, Length=373, Percent_Identity=34.0482573726542, Blast_Score=212, Evalue=9e-56, Organism=Saccharomyces cerevisiae, GI6322427, Length=367, Percent_Identity=34.6049046321526, Blast_Score=211, Evalue=1e-55, Organism=Saccharomyces cerevisiae, GI6322912, Length=366, Percent_Identity=34.1530054644809, Blast_Score=198, Evalue=2e-51, Organism=Saccharomyces cerevisiae, GI6322323, Length=366, Percent_Identity=34.1530054644809, Blast_Score=198, Evalue=2e-51, Organism=Saccharomyces cerevisiae, GI6320119, Length=380, Percent_Identity=31.3157894736842, Blast_Score=192, Evalue=8e-50, Organism=Saccharomyces cerevisiae, GI6319714, Length=385, Percent_Identity=30.9090909090909, Blast_Score=185, Evalue=1e-47, Organism=Saccharomyces cerevisiae, GI6321267, Length=361, Percent_Identity=32.409972299169, Blast_Score=184, Evalue=2e-47, Organism=Saccharomyces cerevisiae, GI6321963, Length=366, Percent_Identity=33.3333333333333, Blast_Score=181, Evalue=2e-46, Organism=Saccharomyces cerevisiae, GI6324620, Length=374, Percent_Identity=30.2139037433155, Blast_Score=179, Evalue=1e-45, Organism=Saccharomyces cerevisiae, GI6319618, Length=427, Percent_Identity=29.9765807962529, Blast_Score=176, Evalue=6e-45, Organism=Saccharomyces cerevisiae, GI6321111, Length=373, Percent_Identity=31.0991957104558, Blast_Score=174, Evalue=2e-44, Organism=Saccharomyces cerevisiae, GI6323306, Length=422, Percent_Identity=29.1469194312796, Blast_Score=164, Evalue=3e-41, Organism=Saccharomyces cerevisiae, GI6320400, Length=410, Percent_Identity=28.5365853658537, Blast_Score=157, Evalue=4e-39, Organism=Saccharomyces cerevisiae, GI6322876, Length=428, Percent_Identity=27.5700934579439, Blast_Score=122, Evalue=2e-28, Organism=Saccharomyces cerevisiae, GI6324366, Length=362, Percent_Identity=25.414364640884, Blast_Score=116, Evalue=6e-27, Organism=Saccharomyces cerevisiae, GI6321374, Length=436, Percent_Identity=21.3302752293578, Blast_Score=92, Evalue=2e-19, Organism=Drosophila melanogaster, GI28574962, Length=355, Percent_Identity=42.2535211267606, Blast_Score=273, Evalue=3e-73, Organism=Drosophila melanogaster, GI24644479, Length=356, Percent_Identity=40.4494382022472, Blast_Score=270, Evalue=2e-72, Organism=Drosophila melanogaster, GI24644483, Length=356, Percent_Identity=40.4494382022472, Blast_Score=269, Evalue=3e-72, Organism=Drosophila melanogaster, GI281361218, Length=356, Percent_Identity=40.4494382022472, Blast_Score=268, Evalue=4e-72, Organism=Drosophila melanogaster, GI24644481, Length=356, Percent_Identity=40.4494382022472, Blast_Score=268, Evalue=4e-72, Organism=Drosophila melanogaster, GI24644487, Length=356, Percent_Identity=40.4494382022472, Blast_Score=268, Evalue=5e-72, Organism=Drosophila melanogaster, GI45551833, Length=356, Percent_Identity=40.4494382022472, Blast_Score=268, Evalue=5e-72, Organism=Drosophila melanogaster, GI24644485, Length=356, Percent_Identity=40.4494382022472, Blast_Score=268, Evalue=5e-72, Organism=Drosophila melanogaster, GI17985987, Length=369, Percent_Identity=41.7344173441734, Blast_Score=268, Evalue=8e-72, Organism=Drosophila melanogaster, GI24585582, Length=364, Percent_Identity=39.5604395604396, Blast_Score=265, Evalue=5e-71, Organism=Drosophila melanogaster, GI18857967, Length=431, Percent_Identity=37.5870069605568, Blast_Score=260, Evalue=1e-69, Organism=Drosophila melanogaster, GI24584399, Length=352, Percent_Identity=38.6363636363636, Blast_Score=258, Evalue=7e-69, Organism=Drosophila melanogaster, GI24584994, Length=426, Percent_Identity=35.2112676056338, Blast_Score=258, Evalue=7e-69, Organism=Drosophila melanogaster, GI17977678, Length=372, Percent_Identity=37.6344086021505, Blast_Score=255, Evalue=4e-68, Organism=Drosophila melanogaster, GI21356161, Length=373, Percent_Identity=39.4101876675603, Blast_Score=254, Evalue=8e-68, Organism=Drosophila melanogaster, GI24662330, Length=351, Percent_Identity=39.8860398860399, Blast_Score=252, Evalue=4e-67, Organism=Drosophila melanogaster, GI24642151, Length=368, Percent_Identity=35.5978260869565, Blast_Score=239, Evalue=3e-63, Organism=Drosophila melanogaster, GI21355075, Length=331, Percent_Identity=38.368580060423, Blast_Score=239, Evalue=4e-63, Organism=Drosophila melanogaster, GI24645031, Length=369, Percent_Identity=35.230352303523, Blast_Score=238, Evalue=1e-62, Organism=Drosophila melanogaster, GI28575014, Length=364, Percent_Identity=35.989010989011, Blast_Score=236, Evalue=2e-62, Organism=Drosophila melanogaster, GI281365720, Length=316, Percent_Identity=40.5063291139241, Blast_Score=226, Evalue=2e-59, Organism=Drosophila melanogaster, GI24583279, Length=345, Percent_Identity=33.9130434782609, Blast_Score=226, Evalue=3e-59, Organism=Drosophila melanogaster, GI24583281, Length=346, Percent_Identity=33.8150289017341, Blast_Score=226, Evalue=4e-59, Organism=Drosophila melanogaster, GI24582080, Length=363, Percent_Identity=35.2617079889807, Blast_Score=218, Evalue=6e-57, Organism=Drosophila melanogaster, GI24582078, Length=363, Percent_Identity=35.2617079889807, Blast_Score=218, Evalue=6e-57, Organism=Drosophila melanogaster, GI17136248, Length=363, Percent_Identity=35.2617079889807, Blast_Score=218, Evalue=6e-57, Organism=Drosophila melanogaster, GI24582075, Length=363, Percent_Identity=35.2617079889807, Blast_Score=218, Evalue=6e-57, Organism=Drosophila melanogaster, GI17136814, Length=383, Percent_Identity=35.2480417754569, Blast_Score=207, Evalue=2e-53, Organism=Drosophila melanogaster, GI28571808, Length=355, Percent_Identity=35.4929577464789, Blast_Score=195, Evalue=5e-50, Organism=Drosophila melanogaster, GI28571809, Length=355, Percent_Identity=35.4929577464789, Blast_Score=195, Evalue=5e-50, Organism=Drosophila melanogaster, GI24642822, Length=390, Percent_Identity=32.3076923076923, Blast_Score=192, Evalue=3e-49, Organism=Drosophila melanogaster, GI24666101, Length=372, Percent_Identity=34.1397849462366, Blast_Score=185, Evalue=8e-47, Organism=Drosophila melanogaster, GI21355559, Length=368, Percent_Identity=35.8695652173913, Blast_Score=182, Evalue=6e-46, Organism=Drosophila melanogaster, GI24581954, Length=379, Percent_Identity=30.0791556728232, Blast_Score=181, Evalue=1e-45, Organism=Drosophila melanogaster, GI24581952, Length=379, Percent_Identity=30.0791556728232, Blast_Score=181, Evalue=1e-45, Organism=Drosophila melanogaster, GI24581956, Length=379, Percent_Identity=30.0791556728232, Blast_Score=181, Evalue=1e-45, Organism=Drosophila melanogaster, GI17647335, Length=387, Percent_Identity=30.2325581395349, Blast_Score=181, Evalue=1e-45, Organism=Drosophila melanogaster, GI20130173, Length=456, Percent_Identity=28.0701754385965, Blast_Score=164, Evalue=2e-40, Organism=Drosophila melanogaster, GI24643725, Length=382, Percent_Identity=28.7958115183246, Blast_Score=162, Evalue=5e-40, Organism=Drosophila melanogaster, GI19920478, Length=353, Percent_Identity=29.4617563739377, Blast_Score=147, Evalue=2e-35, Organism=Drosophila melanogaster, GI24668515, Length=333, Percent_Identity=28.2282282282282, Blast_Score=140, Evalue=2e-33, Organism=Drosophila melanogaster, GI24640164, Length=348, Percent_Identity=27.0114942528736, Blast_Score=127, Evalue=2e-29, Organism=Drosophila melanogaster, GI17136666, Length=466, Percent_Identity=26.3948497854077, Blast_Score=122, Evalue=4e-28, Organism=Drosophila melanogaster, GI18859659, Length=204, Percent_Identity=31.3725490196078, Blast_Score=105, Evalue=9e-23, Organism=Drosophila melanogaster, GI28571338, Length=204, Percent_Identity=31.3725490196078, Blast_Score=105, Evalue=9e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 53196; Mature: 53196
Theoretical pI: Translated: 11.12; Mature: 11.12
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERTNLLTSFQDFGLADPISRALQEENYTVPTPIQAQTIPLALAGRDVVGIAQTGTGKTA CCCHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCH SFALPILHRILENRIKPQPKTCRVLVLSPTRELSGQILDSFNAYGRHIRLSATLAIGGVP HHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEEEECCCC MGRQVRSLMQGVEVLVATPGRLLDLVQSNALRLGQVEFLVLDEADRMLDMGFINDIRKIV CCHHHHHHHHHHHEECCCCHHHHHHHHHCCEEECCEEEEEECCHHHHHHHHHHHHHHHHH AKLPIKRQTLFFSATMPKDIADLAEQMLRDPARVAVTPVASTVERINQRVIHLDHSAKPA HHCCCCCEEEEEECCCCHHHHHHHHHHHCCCHHEEECHHHHHHHHHHHHEEEECCCCCHH MLATILQQDGVNQALVFTRTKHGADKVVKGLQRAGITADAIHGNKSQNYRERVLAAFRTG HHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHCC ELRTLVATDIAARGIDVDGVSHVVNFDLPNIPETYVHRIGRTARAGAEGTAISLCAGGEE CHHHHHHHHHHHCCCCCCCHHHEEECCCCCCCHHHHHHCCCHHCCCCCCCEEEEECCCCC TGYLRDIEKLIRIALPKEDHRTPGAKPAPSTAPQRGGQRNGQQRNGQQRSGGQRNGAAPH CCHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCC AARGDAAPGSNDPRRPRRAGGPNAGRNPDAARHEPAVRPQHGGQAEGLQGVAFLQRKNDR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCC PAKTTNQRPQR CCCCCCCCCCC >Mature Secondary Structure MERTNLLTSFQDFGLADPISRALQEENYTVPTPIQAQTIPLALAGRDVVGIAQTGTGKTA CCCHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCH SFALPILHRILENRIKPQPKTCRVLVLSPTRELSGQILDSFNAYGRHIRLSATLAIGGVP HHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEEEECCCC MGRQVRSLMQGVEVLVATPGRLLDLVQSNALRLGQVEFLVLDEADRMLDMGFINDIRKIV CCHHHHHHHHHHHEECCCCHHHHHHHHHCCEEECCEEEEEECCHHHHHHHHHHHHHHHHH AKLPIKRQTLFFSATMPKDIADLAEQMLRDPARVAVTPVASTVERINQRVIHLDHSAKPA HHCCCCCEEEEEECCCCHHHHHHHHHHHCCCHHEEECHHHHHHHHHHHHEEEECCCCCHH MLATILQQDGVNQALVFTRTKHGADKVVKGLQRAGITADAIHGNKSQNYRERVLAAFRTG HHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHCC ELRTLVATDIAARGIDVDGVSHVVNFDLPNIPETYVHRIGRTARAGAEGTAISLCAGGEE CHHHHHHHHHHHCCCCCCCHHHEEECCCCCCCHHHHHHCCCHHCCCCCCCEEEEECCCCC TGYLRDIEKLIRIALPKEDHRTPGAKPAPSTAPQRGGQRNGQQRNGQQRSGGQRNGAAPH CCHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCC AARGDAAPGSNDPRRPRRAGGPNAGRNPDAARHEPAVRPQHGGQAEGLQGVAFLQRKNDR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCC PAKTTNQRPQR CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8037924; 8905232; 9278503; 1931833; 10361280 [H]