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The map label for this gene is gspE [C]

Identifier: 86748904

GI number: 86748904

Start: 2042291

End: 2043694

Strand: Reverse

Name: gspE [C]

Synonym: RPB_1781

Alternate gene names: 86748904

Gene position: 2043694-2042291 (Counterclockwise)

Preceding gene: 86748905

Following gene: 86748903

Centisome position: 38.33

GC content: 67.38

Gene sequence:

>1404_bases
GTGAGCCCGGCTCCGGAGCCGATGTCACGCGCGCCCGAGGCGCCGTCCGCGGTCGCCTCGCCGCCGCTCGCACCGAACCG
CGCGCCGCCGCCGCCGCCCCAGGCCGAAGCCCGCCGCTCCGACAATTACTACCAGGTCAAGGCGACGATCTTCGGCGCGC
TGATCGAGGCGATCGACCTGGCGCAGCTCGCCAAGCTCGACGCCGAATCCGCGCGCGAAGAAATCCGCGACATCGTCAAC
GAGATCATCGCGATCAAGAACATCGTGATGTCGATCTCCGAGCAGGAGGAACTGCTCGACGACATCTGCAACGACGTGCT
CGGCTACGGCCCGCTGGAGCCGCTGCTGTCGCGCGACGACATCTCCGACATCATGGTCAACGGCGCCGGCACGGTGTTCA
TCGAAGTCGCCGGCCGGATCCAGCGCACCGGCATCCGCTTCCGCGACAATCAGCAGCTCCTCAACATCTGCCAGCGCATC
GTCAGCCAGGTCGGCCGGCGCGTCGACGAATCCTCGCCGATCTGCGACGCCCGCCTCGCCGACGGCAGCCGCGTCAACGC
CATCGTGCCGCCGCTGGCGATCGACGGCCCCGCGCTCACCATCCGCAAATTCAAGAAGGACAAGCTGACGCTCGACCAGC
TCGTCAAATTCGGCGCGATCACGCCGGAGGGCGCGCAGATCCTGCAGATCATCGGCCGCACCCGCTGCAACGTGCTGATC
TCCGGCGGCACCGGCTCCGGCAAGACCACGCTGCTGAACTGCCTGACCAACTACATCGACGACGACGAGCGCATCATCAC
CTGCGAAGACGCCGCCGAACTGCAGCTGCAGCAGCCGCACGTGGTGCGCCTCGAAACCCGGCCGCCGAACATCGAGGGCG
AAGGCCAGGTGACGATGCGCGAACTGGTGCGCAACTGCCTGCGTATGCGGCCGGAACGGATCATCGTCGGCGAAGTCCGC
GGACCGGAGGCGTTCGACCTGTTGCAGGCGATGAACACCGGCCACGACGGTTCGATGGGCACGCTGCACGCCAACAACCC
GCGCGAGGCGCTGTCGCGCTGCGAGTCCATGATCACCATGGGCGGCTTCTCGCTGCCCTCGCGCACCATCCGCGAGATGA
TCTGCGCCTCGATCGACGTCATCATCCAGGCCGCACGGCTGCGCGACGGCTCGCGCCGGATCACCCACATCACCGAGGTG
ATGGGGATGGAAGGCGACACCATCATCACCCAGGATCTGTTCATCTACGACATCATCGGCGAGGACGCCAACGGCCACAT
CGTCGGCCGGCATCGCTCGACCGGGATCGGCAGGCCGCGGTTCTGGGAACGCGCGCGCTATTACGGCGAGGAAAAGCGGC
TCGCCGCGGCGCTCGACGCCGCCGAAGTCGCAGCCGTCACCTGA

Upstream 100 bases:

>100_bases
GCCGATCCTGGAGAAGCTGCGGGCGAAATAAGTCGCCCATCGGAGTATCGTCGTGTTCGGTAAGCGTAGCGGTTCAGATC
AAGAGGTGCGTTCGAAGCCG

Downstream 100 bases:

>100_bases
GGGAGCGATCCATGGAGATGCAATCGCTAGCCCTCGGTTTCCTCGCCGCCGTCTCCGTCGGCGGGCTGGCCTGGGTCTTC
ATCTATCCGCTGCTGTCCGG

Product: type II secretion system protein E

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 467; Mature: 466

Protein sequence:

>467_residues
MSPAPEPMSRAPEAPSAVASPPLAPNRAPPPPPQAEARRSDNYYQVKATIFGALIEAIDLAQLAKLDAESAREEIRDIVN
EIIAIKNIVMSISEQEELLDDICNDVLGYGPLEPLLSRDDISDIMVNGAGTVFIEVAGRIQRTGIRFRDNQQLLNICQRI
VSQVGRRVDESSPICDARLADGSRVNAIVPPLAIDGPALTIRKFKKDKLTLDQLVKFGAITPEGAQILQIIGRTRCNVLI
SGGTGSGKTTLLNCLTNYIDDDERIITCEDAAELQLQQPHVVRLETRPPNIEGEGQVTMRELVRNCLRMRPERIIVGEVR
GPEAFDLLQAMNTGHDGSMGTLHANNPREALSRCESMITMGGFSLPSRTIREMICASIDVIIQAARLRDGSRRITHITEV
MGMEGDTIITQDLFIYDIIGEDANGHIVGRHRSTGIGRPRFWERARYYGEEKRLAAALDAAEVAAVT

Sequences:

>Translated_467_residues
MSPAPEPMSRAPEAPSAVASPPLAPNRAPPPPPQAEARRSDNYYQVKATIFGALIEAIDLAQLAKLDAESAREEIRDIVN
EIIAIKNIVMSISEQEELLDDICNDVLGYGPLEPLLSRDDISDIMVNGAGTVFIEVAGRIQRTGIRFRDNQQLLNICQRI
VSQVGRRVDESSPICDARLADGSRVNAIVPPLAIDGPALTIRKFKKDKLTLDQLVKFGAITPEGAQILQIIGRTRCNVLI
SGGTGSGKTTLLNCLTNYIDDDERIITCEDAAELQLQQPHVVRLETRPPNIEGEGQVTMRELVRNCLRMRPERIIVGEVR
GPEAFDLLQAMNTGHDGSMGTLHANNPREALSRCESMITMGGFSLPSRTIREMICASIDVIIQAARLRDGSRRITHITEV
MGMEGDTIITQDLFIYDIIGEDANGHIVGRHRSTGIGRPRFWERARYYGEEKRLAAALDAAEVAAVT
>Mature_466_residues
SPAPEPMSRAPEAPSAVASPPLAPNRAPPPPPQAEARRSDNYYQVKATIFGALIEAIDLAQLAKLDAESAREEIRDIVNE
IIAIKNIVMSISEQEELLDDICNDVLGYGPLEPLLSRDDISDIMVNGAGTVFIEVAGRIQRTGIRFRDNQQLLNICQRIV
SQVGRRVDESSPICDARLADGSRVNAIVPPLAIDGPALTIRKFKKDKLTLDQLVKFGAITPEGAQILQIIGRTRCNVLIS
GGTGSGKTTLLNCLTNYIDDDERIITCEDAAELQLQQPHVVRLETRPPNIEGEGQVTMRELVRNCLRMRPERIIVGEVRG
PEAFDLLQAMNTGHDGSMGTLHANNPREALSRCESMITMGGFSLPSRTIREMICASIDVIIQAARLRDGSRRITHITEVM
GMEGDTIITQDLFIYDIIGEDANGHIVGRHRSTGIGRPRFWERARYYGEEKRLAAALDAAEVAAVT

Specific function: Involved In A General Secretion Pathway (Gsp) For The Export Of Proteins (By Similarity). [C]

COG id: COG4962

COG function: function code U; Flp pilus assembly protein, ATPase CpaF

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022399
- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E [H]

EC number: NA

Molecular weight: Translated: 51255; Mature: 51124

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: PS00227 TUBULIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPAPEPMSRAPEAPSAVASPPLAPNRAPPPPPQAEARRSDNYYQVKATIFGALIEAIDL
CCCCCCHHHCCCCCCCHHCCCCCCCCCCCCCCCCHHHCCCCCEEEEHHHHHHHHHHHHHH
AQLAKLDAESAREEIRDIVNEIIAIKNIVMSISEQEELLDDICNDVLGYGPLEPLLSRDD
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCC
ISDIMVNGAGTVFIEVAGRIQRTGIRFRDNQQLLNICQRIVSQVGRRVDESSPICDARLA
HHHHHCCCCCEEEEEECCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
DGSRVNAIVPPLAIDGPALTIRKFKKDKLTLDQLVKFGAITPEGAQILQIIGRTRCNVLI
CCCCCCEECCCCCCCCCCHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHCCCCCEEEE
SGGTGSGKTTLLNCLTNYIDDDERIITCEDAAELQLQQPHVVRLETRPPNIEGEGQVTMR
ECCCCCCHHHHHHHHHHHCCCCCEEEEECCHHHCEECCCCEEEEECCCCCCCCCCCHHHH
ELVRNCLRMRPERIIVGEVRGPEAFDLLQAMNTGHDGSMGTLHANNPREALSRCESMITM
HHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHH
GGFSLPSRTIREMICASIDVIIQAARLRDGSRRITHITEVMGMEGDTIITQDLFIYDIIG
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEECCEEEEEEEC
EDANGHIVGRHRSTGIGRPRFWERARYYGEEKRLAAALDAAEVAAVT
CCCCCCEEECCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SPAPEPMSRAPEAPSAVASPPLAPNRAPPPPPQAEARRSDNYYQVKATIFGALIEAIDL
CCCCCHHHCCCCCCCHHCCCCCCCCCCCCCCCCHHHCCCCCEEEEHHHHHHHHHHHHHH
AQLAKLDAESAREEIRDIVNEIIAIKNIVMSISEQEELLDDICNDVLGYGPLEPLLSRDD
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCC
ISDIMVNGAGTVFIEVAGRIQRTGIRFRDNQQLLNICQRIVSQVGRRVDESSPICDARLA
HHHHHCCCCCEEEEEECCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
DGSRVNAIVPPLAIDGPALTIRKFKKDKLTLDQLVKFGAITPEGAQILQIIGRTRCNVLI
CCCCCCEECCCCCCCCCCHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHCCCCCEEEE
SGGTGSGKTTLLNCLTNYIDDDERIITCEDAAELQLQQPHVVRLETRPPNIEGEGQVTMR
ECCCCCCHHHHHHHHHHHCCCCCEEEEECCHHHCEECCCCEEEEECCCCCCCCCCCHHHH
ELVRNCLRMRPERIIVGEVRGPEAFDLLQAMNTGHDGSMGTLHANNPREALSRCESMITM
HHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHH
GGFSLPSRTIREMICASIDVIIQAARLRDGSRRITHITEVMGMEGDTIITQDLFIYDIIG
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEECCEEEEEEEC
EDANGHIVGRHRSTGIGRPRFWERARYYGEEKRLAAALDAAEVAAVT
CCCCCCEEECCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12218036; 9634230 [H]