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The map label for this gene is 86748903

Identifier: 86748903

GI number: 86748903

Start: 2041305

End: 2042279

Strand: Reverse

Name: 86748903

Synonym: RPB_1780

Alternate gene names: NA

Gene position: 2042279-2041305 (Counterclockwise)

Preceding gene: 86748904

Following gene: 86748902

Centisome position: 38.3

GC content: 65.23

Gene sequence:

>975_bases
ATGGAGATGCAATCGCTAGCCCTCGGTTTCCTCGCCGCCGTCTCCGTCGGCGGGCTGGCCTGGGTCTTCATCTATCCGCT
GCTGTCCGGCGAGAAGCAGGCCGAACAACGCCGCACCTCGGTCGCGCGGACGACGCCGGCGGTGCGACAGATCGAGAAAT
CGCAACGGTCGCGCCGCGAGCAGGTCGAAGGATCGCTGCGCGAGATCGAGGCGCGCAGCCAGAAGCAGAAGAACGTCTCG
CTCGGCACCAAACTGACCCAGGCCGGGCTCGACTGGACGCCGAACAAGTTCATCGGCGTGTCGGCGGGGCTCGGCACCGT
CGCGTTCGCCACCACCATGATCCTCGGCGGCGGATTGCTCGCGGCGGTCGGACTGGCCTTCGCGGCCGGCTTCGGCTTGC
CGCGCTGGGTGCTGGGCTTTTTGAAGAAGCGCCGTGAAAAGAAATTCATCAATGCGCTGCCGGACGCCGTCGACGTCATC
GTGCGCGGCATCAAGGCCGGCCTGCCGCTGTTCGACTCGCTCAAGGTGGTCGCGGCGGATTCGCCGGAGCCGCTGAAGAG
CGAATTCAACGCCATCATCGAAACCCAGGCGATCGGCATGCCGCTCGGCGAGGCCTGCGCCCGGCTGTACGACCGGATGC
CGCTGCCGGAAGCCAACTTCTTCGGCATCGTGATCTCGATTCAGCAGAAGTCCGGCGGCAATCTGTCGGAAGCGCTCGGC
AACCTCTCCAAGGTGCTGCGCGACCGCAAGAAGATGGCCGAGAAGATCCAGGCGATGTCGATGGAGGCTAAGGCCTCGGC
CGCGATCATCGGCTCGCTGCCGCCGATCGTGATGCTGCTCGTCTACCTGTCGACGCCGGACTACATCGCGCTGCTGTGGA
CCCACCCGACCGGCCGGCTGATGCTGGCCGGCTGCGTGGTGTGGATGTCGGCGGGCATCCTGGTGATGAAGAAGATGATC
AATTTCGACTTCTGA

Upstream 100 bases:

>100_bases
CGCGGTTCTGGGAACGCGCGCGCTATTACGGCGAGGAAAAGCGGCTCGCCGCGGCGCTCGACGCCGCCGAAGTCGCAGCC
GTCACCTGAGGGAGCGATCC

Downstream 100 bases:

>100_bases
AGGCGGCTGCGATGATCGACCTGCTGATCGAAAAATTTCACGACGCCCGCTTCATGACGATGCTGCTGGCGGCGATCGCC
GTCAGCGCCACAGTGTATAC

Product: type II secretion system protein

Products: NA

Alternate protein names: Flp Pilus Assembly Protein TadB; Type II Secretion System F Domain Protein; Pilus Assembly Protein; Type II Secretion System F Domain-Containing Protein; Flp Pilus Assembly Protein; Type II Secretion System Protein F; Bacterial Type II Secretion System Protein F Domain; Pilus Assembly Protein TadB; Type II/IV Secretion System Protein TadC Subfamily; TadB Protein; Integral Membrane Protein; Type II Secretion System F Domain; Type II Secretion System; Type II Secretion System Protein F Domain; Tad Secretion System Pilus Assembly Protein; Bacterial Type II Secretion System Protein F; Secretion System Protein; MaoC Protein; Flp Pilus Assembly Protein Tadb; Secretion System Protein TadB; Sercretion System Protein; Tight Adherence TadB-Related Transmembrane Protein; Tight Adherence Protein B; Bacterial Type II Secretion System Protein F Domain Protein; Flp Pilus Assembly Protein TadC; TadB-Like Pilus Assembly Protein; Type II/IV Secretion System Membrane Protein; Tad Secretion System Secretion Accessory Protein; Component Of Type IV Pilus; Type II Secretion System Integral Membrane Subunit; Tight Adherence TadB-Like Transmembrane Protein; Tight Adherance Operon Protein; Components Of Type IV Pilus; TadC Family Type II/IV Secretion System Protein

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MEMQSLALGFLAAVSVGGLAWVFIYPLLSGEKQAEQRRTSVARTTPAVRQIEKSQRSRREQVEGSLREIEARSQKQKNVS
LGTKLTQAGLDWTPNKFIGVSAGLGTVAFATTMILGGGLLAAVGLAFAAGFGLPRWVLGFLKKRREKKFINALPDAVDVI
VRGIKAGLPLFDSLKVVAADSPEPLKSEFNAIIETQAIGMPLGEACARLYDRMPLPEANFFGIVISIQQKSGGNLSEALG
NLSKVLRDRKKMAEKIQAMSMEAKASAAIIGSLPPIVMLLVYLSTPDYIALLWTHPTGRLMLAGCVVWMSAGILVMKKMI
NFDF

Sequences:

>Translated_324_residues
MEMQSLALGFLAAVSVGGLAWVFIYPLLSGEKQAEQRRTSVARTTPAVRQIEKSQRSRREQVEGSLREIEARSQKQKNVS
LGTKLTQAGLDWTPNKFIGVSAGLGTVAFATTMILGGGLLAAVGLAFAAGFGLPRWVLGFLKKRREKKFINALPDAVDVI
VRGIKAGLPLFDSLKVVAADSPEPLKSEFNAIIETQAIGMPLGEACARLYDRMPLPEANFFGIVISIQQKSGGNLSEALG
NLSKVLRDRKKMAEKIQAMSMEAKASAAIIGSLPPIVMLLVYLSTPDYIALLWTHPTGRLMLAGCVVWMSAGILVMKKMI
NFDF
>Mature_324_residues
MEMQSLALGFLAAVSVGGLAWVFIYPLLSGEKQAEQRRTSVARTTPAVRQIEKSQRSRREQVEGSLREIEARSQKQKNVS
LGTKLTQAGLDWTPNKFIGVSAGLGTVAFATTMILGGGLLAAVGLAFAAGFGLPRWVLGFLKKRREKKFINALPDAVDVI
VRGIKAGLPLFDSLKVVAADSPEPLKSEFNAIIETQAIGMPLGEACARLYDRMPLPEANFFGIVISIQQKSGGNLSEALG
NLSKVLRDRKKMAEKIQAMSMEAKASAAIIGSLPPIVMLLVYLSTPDYIALLWTHPTGRLMLAGCVVWMSAGILVMKKMI
NFDF

Specific function: Unknown

COG id: COG4965

COG function: function code U; Flp pilus assembly protein TadB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35065; Mature: 35065

Theoretical pI: Translated: 10.50; Mature: 10.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEMQSLALGFLAAVSVGGLAWVFIYPLLSGEKQAEQRRTSVARTTPAVRQIEKSQRSRRE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
QVEGSLREIEARSQKQKNVSLGTKLTQAGLDWTPNKFIGVSAGLGTVAFATTMILGGGLL
HHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHHHHHHCCHHH
AAVGLAFAAGFGLPRWVLGFLKKRREKKFINALPDAVDVIVRGIKAGLPLFDSLKVVAAD
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHCCEEEECC
SPEPLKSEFNAIIETQAIGMPLGEACARLYDRMPLPEANFFGIVISIQQKSGGNLSEALG
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCHHHHHH
NLSKVLRDRKKMAEKIQAMSMEAKASAAIIGSLPPIVMLLVYLSTPDYIALLWTHPTGRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEECCCCHH
MLAGCVVWMSAGILVMKKMINFDF
HHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MEMQSLALGFLAAVSVGGLAWVFIYPLLSGEKQAEQRRTSVARTTPAVRQIEKSQRSRRE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
QVEGSLREIEARSQKQKNVSLGTKLTQAGLDWTPNKFIGVSAGLGTVAFATTMILGGGLL
HHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHHHHHHCCHHH
AAVGLAFAAGFGLPRWVLGFLKKRREKKFINALPDAVDVIVRGIKAGLPLFDSLKVVAAD
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHCCEEEECC
SPEPLKSEFNAIIETQAIGMPLGEACARLYDRMPLPEANFFGIVISIQQKSGGNLSEALG
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCHHHHHH
NLSKVLRDRKKMAEKIQAMSMEAKASAAIIGSLPPIVMLLVYLSTPDYIALLWTHPTGRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEECCCCHH
MLAGCVVWMSAGILVMKKMINFDF
HHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA