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The map label for this gene is 86748902

Identifier: 86748902

GI number: 86748902

Start: 2040319

End: 2041293

Strand: Reverse

Name: 86748902

Synonym: RPB_1779

Alternate gene names: NA

Gene position: 2041293-2040319 (Counterclockwise)

Preceding gene: 86748903

Following gene: 86748900

Centisome position: 38.29

GC content: 64.62

Gene sequence:

>975_bases
ATGATCGACCTGCTGATCGAAAAATTTCACGACGCCCGCTTCATGACGATGCTGCTGGCGGCGATCGCCGTCAGCGCCAC
AGTGTATACGCTGGTGATGCCGCTGCTCGTCGGCGAGACCTTGGCCAAGCGGATGAAAGCGGTCGGCAGCGAGCGCGAGC
GGCTTCGCCAGCGCGAGCGCGACCGGCTCGCCAAGGCCGAACGGGTGTCGCTGCGGCAGGCACCCAAGCAGTTTGTCGCC
AAGATCGTCGACGACCTCAACCTCGGCAAGTGGGTGGCGCAGGAAAGCGCGCGCGACAAGCTGGTGATGGCCGGCTATCG
CGGCCAGGCGCCCTACATCACCTTCCTGTTCTTCCGCATGGTGATGCCGATCGCGTTCGGCCTCGCGGCGGCGCTCTACG
TGTTCGTGCTGTCGAACATGGATCAGTCGACGCCGATCAAGGTCGCTATCTGCATCGGCTGCGTGTTCCTCGGCATGCAG
GCGCCGATGCTGTTCCTGAAGAACGCCATCACCAAGCGCCAGCTCTCGATCCGGCGTGCGTTTCCGGACGCGCTCGACCT
GCTGCTGATCTGCATCGAATCCGGCATGTCGATCGAGGCGGCGTTCCGCAAGGTCGCGGTCGAGATCGGCACCCAGTCGA
TCCCGCTGGCGGAGGAATTCACGCTGACGACGGCGGAGCTGTCCTATCTGCCCGACCGCAAACAGGCCTATGAGAACCTG
GCGAAGCGCACCGGGCTGGACGGCGTCAAATCGGTCTGCCTGGCGCTGCAGCAGTCGGAACGCTACGGCACGCCGCTCAG
CCAGAGCATCCGGGTGATGGCGCAGGAAAACCGCGACATGCGGATGAACGAGGCCGAGAAGAAGGCCGCGGCCTTGCCGC
CGAAGCTGACGGTGCCGATGATCCTGTTCTTCCTGCCGGTGCTGTTCGTGGTGATCCTCGGGCCGACCGGGATCAGGGTC
GCAGCGATGCAGTGA

Upstream 100 bases:

>100_bases
CGACCGGCCGGCTGATGCTGGCCGGCTGCGTGGTGTGGATGTCGGCGGGCATCCTGGTGATGAAGAAGATGATCAATTTC
GACTTCTGAAGGCGGCTGCG

Downstream 100 bases:

>100_bases
ACGCTGCGTCGCACGACGACACGAGCGTGATGGTCGTGCTGGCGGTGGGGAATGATCAGTCGCCGGAGGCCAGCACGCCG
CGGCCGCGGCCGCGCGGGTC

Product: type II secretion system protein

Products: NA

Alternate protein names: Flp Pilus Assembly Protein TadC; Type II Secretion System F Domain Protein; Type II/IV Secretion System Protein TadC Subfamily; Flp Pilus Assembly Protein; Type II Secretion System F Domain-Containing Protein; TadC Protein; Tad Secretion System Secretion Accessory Protein; Bacterial Type II Secretion System Protein F Domain; Pilus Assembly Protein; Pilus Component Protein; TadC Pilus Assembly Protein; TadC Family Type II/IV Secretion System Protein; Tight Adherence TadC-Like Transmembrane Protein; Type II Secretion System; TadC Component Of Type IV Pilus; Tight Adherence TadC-Related Transmembrane Protein; Secretion System Protein TadC; Tyrosine Phenol-Lyase; Fimbriae-Related Membrane Protein; Pilus Assembly Protein TadC; Putative Tight Adherence TadC-Like Transmembrane Protein; Components Of Type IV Pilus TadC; Integral Membrane Protein; Pilus Assemble Protein; Component Of Type IV Pilus; Component Of Pilus Protein; Type II Secretion System F Domain; Components Of Type IV Pilus

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MIDLLIEKFHDARFMTMLLAAIAVSATVYTLVMPLLVGETLAKRMKAVGSERERLRQRERDRLAKAERVSLRQAPKQFVA
KIVDDLNLGKWVAQESARDKLVMAGYRGQAPYITFLFFRMVMPIAFGLAAALYVFVLSNMDQSTPIKVAICIGCVFLGMQ
APMLFLKNAITKRQLSIRRAFPDALDLLLICIESGMSIEAAFRKVAVEIGTQSIPLAEEFTLTTAELSYLPDRKQAYENL
AKRTGLDGVKSVCLALQQSERYGTPLSQSIRVMAQENRDMRMNEAEKKAAALPPKLTVPMILFFLPVLFVVILGPTGIRV
AAMQ

Sequences:

>Translated_324_residues
MIDLLIEKFHDARFMTMLLAAIAVSATVYTLVMPLLVGETLAKRMKAVGSERERLRQRERDRLAKAERVSLRQAPKQFVA
KIVDDLNLGKWVAQESARDKLVMAGYRGQAPYITFLFFRMVMPIAFGLAAALYVFVLSNMDQSTPIKVAICIGCVFLGMQ
APMLFLKNAITKRQLSIRRAFPDALDLLLICIESGMSIEAAFRKVAVEIGTQSIPLAEEFTLTTAELSYLPDRKQAYENL
AKRTGLDGVKSVCLALQQSERYGTPLSQSIRVMAQENRDMRMNEAEKKAAALPPKLTVPMILFFLPVLFVVILGPTGIRV
AAMQ
>Mature_324_residues
MIDLLIEKFHDARFMTMLLAAIAVSATVYTLVMPLLVGETLAKRMKAVGSERERLRQRERDRLAKAERVSLRQAPKQFVA
KIVDDLNLGKWVAQESARDKLVMAGYRGQAPYITFLFFRMVMPIAFGLAAALYVFVLSNMDQSTPIKVAICIGCVFLGMQ
APMLFLKNAITKRQLSIRRAFPDALDLLLICIESGMSIEAAFRKVAVEIGTQSIPLAEEFTLTTAELSYLPDRKQAYENL
AKRTGLDGVKSVCLALQQSERYGTPLSQSIRVMAQENRDMRMNEAEKKAAALPPKLTVPMILFFLPVLFVVILGPTGIRV
AAMQ

Specific function: Unknown

COG id: COG2064

COG function: function code NU; Flp pilus assembly protein TadC

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36138; Mature: 36138

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHCCCCCEEEECC
>Mature Secondary Structure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HHHHHHHHHHHHHCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA