| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is hpcG [H]
Identifier: 86748831
GI number: 86748831
Start: 1943317
End: 1944123
Strand: Reverse
Name: hpcG [H]
Synonym: RPB_1708
Alternate gene names: 86748831
Gene position: 1944123-1943317 (Counterclockwise)
Preceding gene: 86748844
Following gene: 86748830
Centisome position: 36.46
GC content: 64.31
Gene sequence:
>807_bases ATGGCGTTGTCGACGAACGAGATTCGCGCCGCAGCCGAACGGCTGCACCAGGCCGAAAAGACCAGAATTCAGATCCGGCA GCTCTCGCTCGACCATCCGGCGATCGACATCGGCGACGCCTACGCCATCCAGCACGCCTGGATTGATCTCAAGCGCGCCG AGGGTCGCACAATTCGCGGCCACAAGATCGGGCTGACCTCGAAAGCGATGCAGAGCCAGCTTTCGATCGACGAGCCGGAT TCCGGCGTGCTGCTCGACGACATGTTCTTCGCCGACGGCGGCACCGTACCCACCGACCATTTCATCGCCACGCGGATCGA GGCCGAGCTCGCCTTCGTCATCAGGCATCGCCTCGAAGGCCCGAATTGCACGATCTTCGACGTCCTCAACGCCACCGACT TCGTCGTTCCCGCACTGGAAATTCTCGATACCCGCGTGCAGCGCGTCGATCCGGACACCAAGGCGACGCGCAAGATCTAC GACACCATCGCCGACAATGCGGCGAATGCCGGCATCGTGCTCGGTGGCCGGCCGATCCGACCGCTCGACACGGATCTGCG TTGGATCGGCGCGCTGGTGAGCAGGAACGGCCAACTCGAAGAGACCGGGCTCGCCGCCGGCGTGCTCAACCATCCGGCCA CCGCGGTGGCATGGCTCGCCAACAAGATCGCAGCCTCGGGGCTGGCGCTGGAACCGGGGCAGACCGTGCTGGCAGGATCG TTCATCCGCGCTATCGAATGCCGCAAGGGCGACACGATTCAGGCCGACTACGGTCCCTACGGCACCGTGAGTTGCTACTT CGGCTGA
Upstream 100 bases:
>100_bases GTTTCGGTTTGAGCCCGATCATTTAACATGTTAATCAATTCTCGCGCGAGCGTTTTCGTGGACGCCGGCTCAGGGACGGA AATCGAGGCGGAAGCCGAAC
Downstream 100 bases:
>100_bases CCATCTGAGCGAGAGCGACCATGCCGCATTTCACCATCGAATATTCCGCCAATCTGGAGGACCGCGTCGAGATGGCGGCC GTCGTCGAACTGGTCCGCGG
Product: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase
Products: NA
Alternate protein names: OHED hydratase [H]
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MALSTNEIRAAAERLHQAEKTRIQIRQLSLDHPAIDIGDAYAIQHAWIDLKRAEGRTIRGHKIGLTSKAMQSQLSIDEPD SGVLLDDMFFADGGTVPTDHFIATRIEAELAFVIRHRLEGPNCTIFDVLNATDFVVPALEILDTRVQRVDPDTKATRKIY DTIADNAANAGIVLGGRPIRPLDTDLRWIGALVSRNGQLEETGLAAGVLNHPATAVAWLANKIAASGLALEPGQTVLAGS FIRAIECRKGDTIQADYGPYGTVSCYFG
Sequences:
>Translated_268_residues MALSTNEIRAAAERLHQAEKTRIQIRQLSLDHPAIDIGDAYAIQHAWIDLKRAEGRTIRGHKIGLTSKAMQSQLSIDEPD SGVLLDDMFFADGGTVPTDHFIATRIEAELAFVIRHRLEGPNCTIFDVLNATDFVVPALEILDTRVQRVDPDTKATRKIY DTIADNAANAGIVLGGRPIRPLDTDLRWIGALVSRNGQLEETGLAAGVLNHPATAVAWLANKIAASGLALEPGQTVLAGS FIRAIECRKGDTIQADYGPYGTVSCYFG >Mature_267_residues ALSTNEIRAAAERLHQAEKTRIQIRQLSLDHPAIDIGDAYAIQHAWIDLKRAEGRTIRGHKIGLTSKAMQSQLSIDEPDS GVLLDDMFFADGGTVPTDHFIATRIEAELAFVIRHRLEGPNCTIFDVLNATDFVVPALEILDTRVQRVDPDTKATRKIYD TIADNAANAGIVLGGRPIRPLDTDLRWIGALVSRNGQLEETGLAAGVLNHPATAVAWLANKIAASGLALEPGQTVLAGSF IRAIECRKGDTIQADYGPYGTVSCYFG
Specific function: Transforms 2-oxo-hept-3-ene-1,7-dioate (OHED) into 2,4- dihydoxy-hept-2-ene-1,7-dioic acid (HHED) [H]
COG id: COG3971
COG function: function code Q; 2-keto-4-pentenoate hydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hydratase/decarboxylase family [H]
Homologues:
Organism=Escherichia coli, GI87081722, Length=228, Percent_Identity=34.6491228070175, Blast_Score=142, Evalue=2e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002529 - InterPro: IPR011234 - InterPro: IPR012690 [H]
Pfam domain/function: PF01557 FAA_hydrolase [H]
EC number: 4.2.1.-
Molecular weight: Translated: 29051; Mature: 28920
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALSTNEIRAAAERLHQAEKTRIQIRQLSLDHPAIDIGDAYAIQHAWIDLKRAEGRTIRG CCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCCEECCCHHHHHHHHEEEECCCCCEECC HKIGLTSKAMQSQLSIDEPDSGVLLDDMFFADGGTVPTDHFIATRIEAELAFVIRHRLEG EEECCCHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCC PNCTIFDVLNATDFVVPALEILDTRVQRVDPDTKATRKIYDTIADNAANAGIVLGGRPIR CCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCC PLDTDLRWIGALVSRNGQLEETGLAAGVLNHPATAVAWLANKIAASGLALEPGQTVLAGS CCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCEEECCCCCHHHHH FIRAIECRKGDTIQADYGPYGTVSCYFG HHHHHCCCCCCEEEECCCCCCCEEEECC >Mature Secondary Structure ALSTNEIRAAAERLHQAEKTRIQIRQLSLDHPAIDIGDAYAIQHAWIDLKRAEGRTIRG CCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCCEECCCHHHHHHHHEEEECCCCCEECC HKIGLTSKAMQSQLSIDEPDSGVLLDDMFFADGGTVPTDHFIATRIEAELAFVIRHRLEG EEECCCHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCC PNCTIFDVLNATDFVVPALEILDTRVQRVDPDTKATRKIYDTIADNAANAGIVLGGRPIR CCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCC PLDTDLRWIGALVSRNGQLEETGLAAGVLNHPATAVAWLANKIAASGLALEPGQTVLAGS CCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCEEECCCCCHHHHH FIRAIECRKGDTIQADYGPYGTVSCYFG HHHHHCCCCCCEEEECCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7737515 [H]