Click here to switch to the map view.

The map label for this gene is 86748844

Identifier: 86748844

GI number: 86748844

Start: 1963173

End: 1963670

Strand: Reverse

Name: 86748844

Synonym: RPB_1721

Alternate gene names: NA

Gene position: 1963670-1963173 (Counterclockwise)

Preceding gene: 86748851

Following gene: 86748831

Centisome position: 36.83

GC content: 65.06

Gene sequence:

>498_bases
ATGAAACTGCTTCGGTCATCATCTTCGCTTCATGCCTTGAAGGCCGCCGGCGTCGCGGCGGCGATGCTGCTGTCGGCCTC
GGCCAGCTACGCAGAAGGACCGTTCGCCGGATTTGAAGGTGCATGGTCGGGCACTGGCACGGTCGCCTTGTCCGACGGCT
CCAAGGAGCGCATCCGTTGCAAGGCGACCTACAAGGTCGGCGGCGGCGGCAACCAGCTCGCGCAGACGCTGCGCTGCGCA
AGCGACAGCTACAAATTCGACCTGACCGCCGACGTCGCCAGCAACGGCGACCGGATCTCCGGCAACTGGAGCGAGGCCAG
CCGCAACATCAACGGCAATCTGCAGGGCAAGGCCGGCGGCGGCAATATCGAAGTCTTCGTCGAGGCCGCCGGTTTCGCCG
CCAGCATCTCGCTGACGACGCGCGGCAACAAGCAGTCGGTCGCGATCAGCTCCAAGGGCGACATCCGCGGCGTCAACATC
AGCATGACCAAGGGCTGA

Upstream 100 bases:

>100_bases
CCGAGATACTATTTGATTTGAACCTGTCGTTGCTCGACGACACTAACAGGCTGATGCGGCGGAGCGTCGTTTCGGCACGA
ATTTTCAGGGGTCAACAAGA

Downstream 100 bases:

>100_bases
TCCTCGATCGTCGATCAAAAACCCCTCGGACCGGCCGGTCCGAGGGGTTTTTTCATTTGAACCGCGTCGCGACGAACGAT
CTGCAGACGCGTCCCTTCCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MKLLRSSSSLHALKAAGVAAAMLLSASASYAEGPFAGFEGAWSGTGTVALSDGSKERIRCKATYKVGGGGNQLAQTLRCA
SDSYKFDLTADVASNGDRISGNWSEASRNINGNLQGKAGGGNIEVFVEAAGFAASISLTTRGNKQSVAISSKGDIRGVNI
SMTKG

Sequences:

>Translated_165_residues
MKLLRSSSSLHALKAAGVAAAMLLSASASYAEGPFAGFEGAWSGTGTVALSDGSKERIRCKATYKVGGGGNQLAQTLRCA
SDSYKFDLTADVASNGDRISGNWSEASRNINGNLQGKAGGGNIEVFVEAAGFAASISLTTRGNKQSVAISSKGDIRGVNI
SMTKG
>Mature_165_residues
MKLLRSSSSLHALKAAGVAAAMLLSASASYAEGPFAGFEGAWSGTGTVALSDGSKERIRCKATYKVGGGGNQLAQTLRCA
SDSYKFDLTADVASNGDRISGNWSEASRNINGNLQGKAGGGNIEVFVEAAGFAASISLTTRGNKQSVAISSKGDIRGVNI
SMTKG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16785; Mature: 16785

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: PS00639 THIOL_PROTEASE_HIS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLLRSSSSLHALKAAGVAAAMLLSASASYAEGPFAGFEGAWSGTGTVALSDGSKERIRC
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEE
KATYKVGGGGNQLAQTLRCASDSYKFDLTADVASNGDRISGNWSEASRNINGNLQGKAGG
EEEEEECCCHHHHHHHHHHCCCCEEEEEEEECCCCCCEECCCHHHHCCCCCCEEEECCCC
GNIEVFVEAAGFAASISLTTRGNKQSVAISSKGDIRGVNISMTKG
CCEEEEEEECCCEEEEEEEECCCCEEEEEECCCCEEEEEEEEECC
>Mature Secondary Structure
MKLLRSSSSLHALKAAGVAAAMLLSASASYAEGPFAGFEGAWSGTGTVALSDGSKERIRC
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEE
KATYKVGGGGNQLAQTLRCASDSYKFDLTADVASNGDRISGNWSEASRNINGNLQGKAGG
EEEEEECCCHHHHHHHHHHCCCCEEEEEEEECCCCCCEECCCHHHHCCCCCCEEEECCCC
GNIEVFVEAAGFAASISLTTRGNKQSVAISSKGDIRGVNISMTKG
CCEEEEEEECCCEEEEEEEECCCCEEEEEECCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA