Click here to switch to the map view.

The map label for this gene is 86748789

Identifier: 86748789

GI number: 86748789

Start: 1894914

End: 1895831

Strand: Reverse

Name: 86748789

Synonym: RPB_1666

Alternate gene names: NA

Gene position: 1895831-1894914 (Counterclockwise)

Preceding gene: 86748790

Following gene: 86748788

Centisome position: 35.56

GC content: 70.81

Gene sequence:

>918_bases
ATGGCCGCCCCGCACCTCCTCACCCCGACCCGAGGACGCGCAGCGCAGGCGGCGATGCTGGCGGACGGCCGGCGCTTGCA
CTTACAGGACGGCCCGATCGACCTGATCATCGAGGCGACCGGCGACCCGCGCGCCGTCCGGCACGCTTATGCCGCCGCCG
CGCAGCGCTTCGCCGGCCTGCTGGATGCGCTGTGCGCCGAACTGCCTGCGCTGCGAAAGCCCGCCGGACGCGACGCGCTG
CCACTGGCCCACCCGGTCGCACAGCGCATGGCCGATGCGGTGGCACCGTTCGCCGATGAAGTTTTCATCACGCCGATGGC
GGCGGTGGCGGGCGCGGTCGCGGACGAGATCCTGAAAGCGCTGGTCTGCCCCGGCATCACCCGCGCCTATGTCAACAATG
GCGGCGATATCGCGGTGCATCTGGCGCAGGATGCAAGCTTCACCGTCGGGTTGATCGACCGCCCGGACCAGCCGCGCCTG
ATCGGCCGCGCCGAGATCGATGCCAGCAGCCCGGTGCGCGGCGTGGCGACCAGCGGCTGGCACGGGCGCAGCTTCTCGCT
CGGCATCGCCGACGCGGTGACCATCCTCGCGCCCACCGCCGCGATGGCTGACGCTGCCGCGACCGTGGTCGCCAACGCGG
TCGACCTGCCCGGCCATCGCGGTATTGTTCGTGAAGCCGCCAACGAGCTTCAACCGGACAGCGATCTGGGTACACTGCAG
GTCACCCGGCATGTGCCACGCCTCGGCCCGGCCGAGCGCGACGCAGCGCTGGTTGCAGGCGTGACGGTGGCACGCGCGCT
GCTGTCGCGCGGACTGATCTGTGCCGCGGCCCTGCATTTGCAGGGCGAGACCGCCAGCGTCGGCGACACAGCGGCGTTCC
TTTCCTTCGAACCACAACAAGAGCAACCCGATGCCTGA

Upstream 100 bases:

>100_bases
GTCGATCGCTCTGAACGACGGCCTGCAGACCGTGGGGCCTCATTCCGACAACCCGTGGCCGCTCGCTCCGAATGCGGCCA
AGCGTTTCTTCGGCTGATCG

Downstream 100 bases:

>100_bases
GGTCAAAATCCGCAAGAAGCTCCTGATCACCGAGGAGATCTTCCACGAGGGCGGCCCGGTGGCGGCCACCCCGCGCAAGC
GCGGCGCGATCATCGCGGTG

Product: hypothetical protein

Products: NA

Alternate protein names: ApbE Family Lipoprotein

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MAAPHLLTPTRGRAAQAAMLADGRRLHLQDGPIDLIIEATGDPRAVRHAYAAAAQRFAGLLDALCAELPALRKPAGRDAL
PLAHPVAQRMADAVAPFADEVFITPMAAVAGAVADEILKALVCPGITRAYVNNGGDIAVHLAQDASFTVGLIDRPDQPRL
IGRAEIDASSPVRGVATSGWHGRSFSLGIADAVTILAPTAAMADAAATVVANAVDLPGHRGIVREAANELQPDSDLGTLQ
VTRHVPRLGPAERDAALVAGVTVARALLSRGLICAAALHLQGETASVGDTAAFLSFEPQQEQPDA

Sequences:

>Translated_305_residues
MAAPHLLTPTRGRAAQAAMLADGRRLHLQDGPIDLIIEATGDPRAVRHAYAAAAQRFAGLLDALCAELPALRKPAGRDAL
PLAHPVAQRMADAVAPFADEVFITPMAAVAGAVADEILKALVCPGITRAYVNNGGDIAVHLAQDASFTVGLIDRPDQPRL
IGRAEIDASSPVRGVATSGWHGRSFSLGIADAVTILAPTAAMADAAATVVANAVDLPGHRGIVREAANELQPDSDLGTLQ
VTRHVPRLGPAERDAALVAGVTVARALLSRGLICAAALHLQGETASVGDTAAFLSFEPQQEQPDA
>Mature_304_residues
AAPHLLTPTRGRAAQAAMLADGRRLHLQDGPIDLIIEATGDPRAVRHAYAAAAQRFAGLLDALCAELPALRKPAGRDALP
LAHPVAQRMADAVAPFADEVFITPMAAVAGAVADEILKALVCPGITRAYVNNGGDIAVHLAQDASFTVGLIDRPDQPRLI
GRAEIDASSPVRGVATSGWHGRSFSLGIADAVTILAPTAAMADAAATVVANAVDLPGHRGIVREAANELQPDSDLGTLQV
TRHVPRLGPAERDAALVAGVTVARALLSRGLICAAALHLQGETASVGDTAAFLSFEPQQEQPDA

Specific function: Unknown

COG id: COG2122

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31457; Mature: 31326

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAPHLLTPTRGRAAQAAMLADGRRLHLQDGPIDLIIEATGDPRAVRHAYAAAAQRFAGL
CCCCCCCCCCCCCHHHHHHHCCCCEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
LDALCAELPALRKPAGRDALPLAHPVAQRMADAVAPFADEVFITPMAAVAGAVADEILKA
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
LVCPGITRAYVNNGGDIAVHLAQDASFTVGLIDRPDQPRLIGRAEIDASSPVRGVATSGW
HHCCCHHHHHHCCCCCEEEEEECCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCC
HGRSFSLGIADAVTILAPTAAMADAAATVVANAVDLPGHRGIVREAANELQPDSDLGTLQ
CCCEEECCHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHH
VTRHVPRLGPAERDAALVAGVTVARALLSRGLICAAALHLQGETASVGDTAAFLSFEPQQ
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCEEEEECCCCC
EQPDA
CCCCC
>Mature Secondary Structure 
AAPHLLTPTRGRAAQAAMLADGRRLHLQDGPIDLIIEATGDPRAVRHAYAAAAQRFAGL
CCCCCCCCCCCCHHHHHHHCCCCEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
LDALCAELPALRKPAGRDALPLAHPVAQRMADAVAPFADEVFITPMAAVAGAVADEILKA
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
LVCPGITRAYVNNGGDIAVHLAQDASFTVGLIDRPDQPRLIGRAEIDASSPVRGVATSGW
HHCCCHHHHHHCCCCCEEEEEECCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCC
HGRSFSLGIADAVTILAPTAAMADAAATVVANAVDLPGHRGIVREAANELQPDSDLGTLQ
CCCEEECCHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHH
VTRHVPRLGPAERDAALVAGVTVARALLSRGLICAAALHLQGETASVGDTAAFLSFEPQQ
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCEEEEECCCCC
EQPDA
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA