Definition | Rhodopseudomonas palustris HaA2, complete genome. |
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Accession | NC_007778 |
Length | 5,331,656 |
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The map label for this gene is livK [C]
Identifier: 86748786
GI number: 86748786
Start: 1892458
End: 1893654
Strand: Reverse
Name: livK [C]
Synonym: RPB_1663
Alternate gene names: 86748786
Gene position: 1893654-1892458 (Counterclockwise)
Preceding gene: 86748787
Following gene: 86748785
Centisome position: 35.52
GC content: 63.91
Gene sequence:
>1197_bases ATGAAACACGTCGCACGACTGGCTTTGACGGCACTGCTTTTCGCCTCCGGCGCTGCCTATGCGCAGCAAGGCGAGATCAA GGTGGGAGAGATCAACTCCTATTCGGCACTCCCCGGCTTCACCGAGCCATACCGCAAGGGCATGGAACTGGCGCTGAAGC AGATCAACGATGCCGGCGGCATCAAGGGCAAGAAGCTCGTCGTCATCACCAAGGACGACGGCGGCAAGCCGGGCGACGCG CTGACCGCCGCCAACGAGCTGGTGTCGCGCGACGGCGTGGTGATGATCGCCGGCGGCTTCCTGTCGAATATCGGCCTGGC GCTGTCCGACTTCGCCAAGCAGAAGAAGGTGCTCTACGTCGCCGCCGAGCCGCTGACCGACGCCATCGTCTGGTCGAAGG GCAACGACTATACTTTCCGGCTGCGCACATCGAACTATATGCAGGCCTCGATGCTGGCGGAGGAAGCCGCCAAGCTGCCG GCCAAGAAGTGGGCGACGATTGCGCCCAACTACGAATTCGGCCAGTCGTTCGTCGCCGCGTTCAAGGAGATTCTCAGCAA GAAGCGTCCCGACGTCGAGTTCGTCGCCGAGCAATGGCCGCCGCTGAACAAGATCGACGCCGGCCCGGTGCTGCAGGCGA TCGACGCCGCCAAGCCCGACGCCATCCTCAACGCCACCTTCGCCGGCGACCTGGTCAAGCTGGTGCGCGAGGGCAATACC CGCGGCGTGTTCAAGGATCGCGCGGTGGTGAGCTATCTCACCGGCGAGCCGGAATATCTCGACCCGCTGAAGACCGAAAC GCCGGAGGGCTGGATCGTCACCGGCTATCCCTGGTACGCGATCAGCACGCCGGAGCATCAGGCTTTCCTCGACGCTTACC AACAGCTCAACAAGGACTATCCGCGGCTCGGCTCGGTGGTCGGCTACGCCACCGTGAAGACCATCGCCGCCGTGCTGACC GCCACCGACGATCACTCCACCGACGGCCTGGTCAAGGCGATGAAGAACCTGAAGGTCGACACCCCGTTCGGCGCGGTCGT CTACCGCGCCGGCGATCATCAGTCGACGATGGGCGCCTATGTCGGCAAGACCACGCAGAAGGACGGCAAGGGCATCATGA CCGACATCAAGTTCAAGAAGGGCGCCGACTATCTACCGCCCGAGGCCGAGGCCGCCAAGCTGCGTCCGGCGAACTGA
Upstream 100 bases:
>100_bases AGAAACTGCGTTTTCGAGCGAAGTGGCGACCGCTTCGCGTGAAGACGACGGATCTAGACGACGAGTGGCTGAGGTTGGTT CAAACAGAGGGCATGAGCGT
Downstream 100 bases:
>100_bases GGCCCGGGGCGGCATGAGGCCGCCCGCACGGCTGCTTCCTCTCTTGCGAACGTCCGCCGCTGACATCAGCGGCGGACACC AGACCCAACCCGCTCCTCCT
Product: extracellular ligand-binding receptor
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 398; Mature: 398
Protein sequence:
>398_residues MKHVARLALTALLFASGAAYAQQGEIKVGEINSYSALPGFTEPYRKGMELALKQINDAGGIKGKKLVVITKDDGGKPGDA LTAANELVSRDGVVMIAGGFLSNIGLALSDFAKQKKVLYVAAEPLTDAIVWSKGNDYTFRLRTSNYMQASMLAEEAAKLP AKKWATIAPNYEFGQSFVAAFKEILSKKRPDVEFVAEQWPPLNKIDAGPVLQAIDAAKPDAILNATFAGDLVKLVREGNT RGVFKDRAVVSYLTGEPEYLDPLKTETPEGWIVTGYPWYAISTPEHQAFLDAYQQLNKDYPRLGSVVGYATVKTIAAVLT ATDDHSTDGLVKAMKNLKVDTPFGAVVYRAGDHQSTMGAYVGKTTQKDGKGIMTDIKFKKGADYLPPEAEAAKLRPAN
Sequences:
>Translated_398_residues MKHVARLALTALLFASGAAYAQQGEIKVGEINSYSALPGFTEPYRKGMELALKQINDAGGIKGKKLVVITKDDGGKPGDA LTAANELVSRDGVVMIAGGFLSNIGLALSDFAKQKKVLYVAAEPLTDAIVWSKGNDYTFRLRTSNYMQASMLAEEAAKLP AKKWATIAPNYEFGQSFVAAFKEILSKKRPDVEFVAEQWPPLNKIDAGPVLQAIDAAKPDAILNATFAGDLVKLVREGNT RGVFKDRAVVSYLTGEPEYLDPLKTETPEGWIVTGYPWYAISTPEHQAFLDAYQQLNKDYPRLGSVVGYATVKTIAAVLT ATDDHSTDGLVKAMKNLKVDTPFGAVVYRAGDHQSTMGAYVGKTTQKDGKGIMTDIKFKKGADYLPPEAEAAKLRPAN >Mature_398_residues MKHVARLALTALLFASGAAYAQQGEIKVGEINSYSALPGFTEPYRKGMELALKQINDAGGIKGKKLVVITKDDGGKPGDA LTAANELVSRDGVVMIAGGFLSNIGLALSDFAKQKKVLYVAAEPLTDAIVWSKGNDYTFRLRTSNYMQASMLAEEAAKLP AKKWATIAPNYEFGQSFVAAFKEILSKKRPDVEFVAEQWPPLNKIDAGPVLQAIDAAKPDAILNATFAGDLVKLVREGNT RGVFKDRAVVSYLTGEPEYLDPLKTETPEGWIVTGYPWYAISTPEHQAFLDAYQQLNKDYPRLGSVVGYATVKTIAAVLT ATDDHSTDGLVKAMKNLKVDTPFGAVVYRAGDHQSTMGAYVGKTTQKDGKGIMTDIKFKKGADYLPPEAEAAKLRPAN
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
None
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 43019; Mature: 43019
Theoretical pI: Translated: 9.10; Mature: 9.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHVARLALTALLFASGAAYAQQGEIKVGEINSYSALPGFTEPYRKGMELALKQINDAGG CCHHHHHHHHHHHHHCCCCHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC IKGKKLVVITKDDGGKPGDALTAANELVSRDGVVMIAGGFLSNIGLALSDFAKQKKVLYV CCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHCCEEEEE AAEPLTDAIVWSKGNDYTFRLRTSNYMQASMLAEEAAKLPAKKWATIAPNYEFGQSFVAA ECCCCCCEEEEECCCCEEEEEECCCHHHHHHHHHHHHHCCHHHCEEECCCHHHHHHHHHH FKEILSKKRPDVEFVAEQWPPLNKIDAGPVLQAIDAAKPDAILNATFAGDLVKLVREGNT HHHHHHCCCCCHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCEEEHHHHHHHHHHHHCCCC RGVFKDRAVVSYLTGEPEYLDPLKTETPEGWIVTGYPWYAISTPEHQAFLDAYQQLNKDY CCEECCCHHEEEECCCCHHCCCCCCCCCCCEEEECCCEEEECCCCHHHHHHHHHHHCCCC PRLGSVVGYATVKTIAAVLTATDDHSTDGLVKAMKNLKVDTPFGAVVYRAGDHQSTMGAY HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHH VGKTTQKDGKGIMTDIKFKKGADYLPPEAEAAKLRPAN HCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKHVARLALTALLFASGAAYAQQGEIKVGEINSYSALPGFTEPYRKGMELALKQINDAGG CCHHHHHHHHHHHHHCCCCHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC IKGKKLVVITKDDGGKPGDALTAANELVSRDGVVMIAGGFLSNIGLALSDFAKQKKVLYV CCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHCCEEEEE AAEPLTDAIVWSKGNDYTFRLRTSNYMQASMLAEEAAKLPAKKWATIAPNYEFGQSFVAA ECCCCCCEEEEECCCCEEEEEECCCHHHHHHHHHHHHHCCHHHCEEECCCHHHHHHHHHH FKEILSKKRPDVEFVAEQWPPLNKIDAGPVLQAIDAAKPDAILNATFAGDLVKLVREGNT HHHHHHCCCCCHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCEEEHHHHHHHHHHHHCCCC RGVFKDRAVVSYLTGEPEYLDPLKTETPEGWIVTGYPWYAISTPEHQAFLDAYQQLNKDY CCEECCCHHEEEECCCCHHCCCCCCCCCCCEEEECCCEEEECCCCHHHHHHHHHHHCCCC PRLGSVVGYATVKTIAAVLTATDDHSTDGLVKAMKNLKVDTPFGAVVYRAGDHQSTMGAY HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHH VGKTTQKDGKGIMTDIKFKKGADYLPPEAEAAKLRPAN HCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11756688 [H]