Definition | Rhodopseudomonas palustris HaA2, complete genome. |
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Accession | NC_007778 |
Length | 5,331,656 |
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The map label for this gene is 86748758
Identifier: 86748758
GI number: 86748758
Start: 1844387
End: 1844653
Strand: Reverse
Name: 86748758
Synonym: RPB_1635
Alternate gene names: NA
Gene position: 1844653-1844387 (Counterclockwise)
Preceding gene: 86748770
Following gene: 86748755
Centisome position: 34.6
GC content: 55.06
Gene sequence:
>267_bases TTGGCGAGAAATTCACACAACAACCGCGCCAACGATCCGACGGGGACTCGGTCCATGCCAGATCTTTTCAAACGCGCGCC GCCTGAATTGGCATCGCCTTCTCGCGACAGCAAACAGGCGTTACTCACGGAGAATGATCGGCTGCGAGAAACGGTTGCAG AGATCGTTCTGCAACTCGATGCGCTATGGGAAAAATTGGATCCCGCAGACCTTCAATGCCGGCAGGAATTCGAGTTCCGC ATCACGACGTTTCACCGCGACAACTAG
Upstream 100 bases:
>100_bases CAATCGTGTTTTTAGCCATGAAATTGAAATCGTATTTATGTCTAATTGTTAGCAAGATCGCGCCAACCCATTTTAGCAGC CGCATTCGTTGACTTAACAT
Downstream 100 bases:
>100_bases GCTAGTCGCAGCTAGCGGGCGCGCATCACTCGCTTCGCCGACAGGGGTCACCCTTGTCGGCGGTATCATGATGGCGACGC CCGACAAAATTCACACGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 88; Mature: 87
Protein sequence:
>88_residues MARNSHNNRANDPTGTRSMPDLFKRAPPELASPSRDSKQALLTENDRLRETVAEIVLQLDALWEKLDPADLQCRQEFEFR ITTFHRDN
Sequences:
>Translated_88_residues MARNSHNNRANDPTGTRSMPDLFKRAPPELASPSRDSKQALLTENDRLRETVAEIVLQLDALWEKLDPADLQCRQEFEFR ITTFHRDN >Mature_87_residues ARNSHNNRANDPTGTRSMPDLFKRAPPELASPSRDSKQALLTENDRLRETVAEIVLQLDALWEKLDPADLQCRQEFEFRI TTFHRDN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10207; Mature: 10076
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARNSHNNRANDPTGTRSMPDLFKRAPPELASPSRDSKQALLTENDRLRETVAEIVLQLD CCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHH ALWEKLDPADLQCRQEFEFRITTFHRDN HHHHHCCCCCCHHHHCCCEEEEEEECCC >Mature Secondary Structure ARNSHNNRANDPTGTRSMPDLFKRAPPELASPSRDSKQALLTENDRLRETVAEIVLQLD CCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHH ALWEKLDPADLQCRQEFEFRITTFHRDN HHHHHCCCCCCHHHHCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA