Click here to switch to the map view.

The map label for this gene is 86748755

Identifier: 86748755

GI number: 86748755

Start: 1837107

End: 1838771

Strand: Reverse

Name: 86748755

Synonym: RPB_1632

Alternate gene names: NA

Gene position: 1838771-1837107 (Counterclockwise)

Preceding gene: 86748758

Following gene: 86748754

Centisome position: 34.49

GC content: 62.7

Gene sequence:

>1665_bases
ATGTTCCAGCGTGTCCTGAACTCCATTGCGGGCGTCGATCACGAGACACTGGCGAGTTGTCCGCCGACGGATCGGATCTG
GGCCGCGCATCTCGGCGCAATGCTGTGCATCTCGTTCATCGTGGTGTTCGGCATCAGCTTCCACGCGATGGGATACATGA
TCGCCGATGTCGGGTTGCAGGTCGCGACCTCGCTGGTGATCGCCACAGTCGTGTTCATGTTCGACCGCGCGCTGTACCAG
TCGGATTGGTTCTATCAAGGTCTGCTGCGAAGGAGTGAAGACGGCATCGAGACCGAGCGCAGTTGGGGGCAGACGCTGTG
GCGGTTGCTGCGCGTCTCGGCGCGGTTGACGATTTCCTTCGGCCTCGCCTGGGTCATTGCAACGTTCTTGGAACTGGCGA
TCTTCTCCGATTCGATCAGCGAACGGATCGAACAAAATCGCGTCGCCGCCAATGTACCGATTGTGCAGAAGGTCGAACTG
TTCGAGGCCCAGCTCGCCGCTGAAATCGAGCGCCGCAGGACCAGTATCGAAGCGATGGAAACGGCGCTGCGCAACGACTT
TGTGACGGCTCCTGCGGTCGACCAGTCCGTCAGCGTCCGCTCGGACGAGTTCGAGCAGCGCATCAAAGCCTTGGATGCCG
AAGAACAGGGATTGCGCGCCGAATTGAAAGAAATCGACAAGGGCATCCTGAGATACGCGGCAGAAGAGAACGCGGAAGAG
ACCGGTCAAAAGATCAGCGAGACCAACAGCGGGAAATCAGGAATCGGTCCGCGGTACCAGTTCGCTCGGCGTCAGCGTGA
AAGTCTCGAACGACAGCGCGATTCGCGGCTGAGCGAGGTCGCGCAGTTGAACGCCAAGCGCGACGAATTGCGATCCGCGC
AAGCGCGCATCACGTCGGAAGCTGCCGTCATTCGCGAACAGCAAATCGCCGGAGCCAAATCAAAACGCGAATCGCTGCAG
CGGCAGATCGACGAAGCGCGGGCGGATCTGCGGCAGGTCGAGGCCCGCAAGGAGGCGAGGATCGATGCGTTCCGGCGAGA
GGTGATGACGAATTCTCACTTTCAGGCACGAACAAAGAACGATCCGCTGTCGCGCATGACCGCGTATCAGGAGATGAAGA
AGGATGCCGACGACGGCTCCACAATCGTACTGTTTTCATGGATGACGAAGCTGTTCGTGATTTTTCTCGAGGTGGTCCCG
GTGCTTGCGAAGATGTTCTTTGCACCGCCCAGCGGCTACGCGGCGCGGGTTCAGGCCCGGGTGAGCAGCGATCGTCTGAG
TTCTCAGCTTCCGAAGGCGCCTCCCGTTGAGGCGCGCCGGCCGCCGGTCGCGCCGCGCCTGACCGTCACTCCTGCGGTGG
CGGCACGGCCGGTGGGCACCGTCGGCGTGGCCCGGGCACAATCTGGTCCAACCGCAGCGGGTGCTGCCGTTCAACCCTTG
CGGTCGCCCCCGCCGCCACGGCCGGCGCAGCCGGCAGAGACCACCATTCCCCCGATCGCAGCGGCCAAACCGGCCCCCAG
CGCCGCGCCGGCCCGGCAACTCAGCGTGCCCGTACAATCGATCGCCGCGCAAGAGGAGGCCTTGGGTGCGGACATGGAGC
GGTTGGTTCGCGAAGCGCAGGAACGACAGGCCGGAGCAATCGGAAGCCGTGTCGCGGTGACATGA

Upstream 100 bases:

>100_bases
GGAACGTTTGCCGAACTGGCGCCTTCTGGCTGCGGCGAGAGACTGATAGGTTTCATCAGTTACGTATTGTTAACCACGAC
ACCGACTTCGCGGAGTGATC

Downstream 100 bases:

>100_bases
AGCGACGCACGCCCGGCAAGGTCGTCCGTCCAATCGGCCGGGACTTGGCTTCGCGCGGAACATGCTGGCGGTGGGCCGAG
GCCTAGAATCGGCCGTCCAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 554; Mature: 554

Protein sequence:

>554_residues
MFQRVLNSIAGVDHETLASCPPTDRIWAAHLGAMLCISFIVVFGISFHAMGYMIADVGLQVATSLVIATVVFMFDRALYQ
SDWFYQGLLRRSEDGIETERSWGQTLWRLLRVSARLTISFGLAWVIATFLELAIFSDSISERIEQNRVAANVPIVQKVEL
FEAQLAAEIERRRTSIEAMETALRNDFVTAPAVDQSVSVRSDEFEQRIKALDAEEQGLRAELKEIDKGILRYAAEENAEE
TGQKISETNSGKSGIGPRYQFARRQRESLERQRDSRLSEVAQLNAKRDELRSAQARITSEAAVIREQQIAGAKSKRESLQ
RQIDEARADLRQVEARKEARIDAFRREVMTNSHFQARTKNDPLSRMTAYQEMKKDADDGSTIVLFSWMTKLFVIFLEVVP
VLAKMFFAPPSGYAARVQARVSSDRLSSQLPKAPPVEARRPPVAPRLTVTPAVAARPVGTVGVARAQSGPTAAGAAVQPL
RSPPPPRPAQPAETTIPPIAAAKPAPSAAPARQLSVPVQSIAAQEEALGADMERLVREAQERQAGAIGSRVAVT

Sequences:

>Translated_554_residues
MFQRVLNSIAGVDHETLASCPPTDRIWAAHLGAMLCISFIVVFGISFHAMGYMIADVGLQVATSLVIATVVFMFDRALYQ
SDWFYQGLLRRSEDGIETERSWGQTLWRLLRVSARLTISFGLAWVIATFLELAIFSDSISERIEQNRVAANVPIVQKVEL
FEAQLAAEIERRRTSIEAMETALRNDFVTAPAVDQSVSVRSDEFEQRIKALDAEEQGLRAELKEIDKGILRYAAEENAEE
TGQKISETNSGKSGIGPRYQFARRQRESLERQRDSRLSEVAQLNAKRDELRSAQARITSEAAVIREQQIAGAKSKRESLQ
RQIDEARADLRQVEARKEARIDAFRREVMTNSHFQARTKNDPLSRMTAYQEMKKDADDGSTIVLFSWMTKLFVIFLEVVP
VLAKMFFAPPSGYAARVQARVSSDRLSSQLPKAPPVEARRPPVAPRLTVTPAVAARPVGTVGVARAQSGPTAAGAAVQPL
RSPPPPRPAQPAETTIPPIAAAKPAPSAAPARQLSVPVQSIAAQEEALGADMERLVREAQERQAGAIGSRVAVT
>Mature_554_residues
MFQRVLNSIAGVDHETLASCPPTDRIWAAHLGAMLCISFIVVFGISFHAMGYMIADVGLQVATSLVIATVVFMFDRALYQ
SDWFYQGLLRRSEDGIETERSWGQTLWRLLRVSARLTISFGLAWVIATFLELAIFSDSISERIEQNRVAANVPIVQKVEL
FEAQLAAEIERRRTSIEAMETALRNDFVTAPAVDQSVSVRSDEFEQRIKALDAEEQGLRAELKEIDKGILRYAAEENAEE
TGQKISETNSGKSGIGPRYQFARRQRESLERQRDSRLSEVAQLNAKRDELRSAQARITSEAAVIREQQIAGAKSKRESLQ
RQIDEARADLRQVEARKEARIDAFRREVMTNSHFQARTKNDPLSRMTAYQEMKKDADDGSTIVLFSWMTKLFVIFLEVVP
VLAKMFFAPPSGYAARVQARVSSDRLSSQLPKAPPVEARRPPVAPRLTVTPAVAARPVGTVGVARAQSGPTAAGAAVQPL
RSPPPPRPAQPAETTIPPIAAAKPAPSAAPARQLSVPVQSIAAQEEALGADMERLVREAQERQAGAIGSRVAVT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61111; Mature: 61111

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFQRVLNSIAGVDHETLASCPPTDRIWAAHLGAMLCISFIVVFGISFHAMGYMIADVGLQ
CHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VATSLVIATVVFMFDRALYQSDWFYQGLLRRSEDGIETERSWGQTLWRLLRVSARLTISF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
GLAWVIATFLELAIFSDSISERIEQNRVAANVPIVQKVELFEAQLAAEIERRRTSIEAME
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TALRNDFVTAPAVDQSVSVRSDEFEQRIKALDAEEQGLRAELKEIDKGILRYAAEENAEE
HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHH
TGQKISETNSGKSGIGPRYQFARRQRESLERQRDSRLSEVAQLNAKRDELRSAQARITSE
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAVIREQQIAGAKSKRESLQRQIDEARADLRQVEARKEARIDAFRREVMTNSHFQARTKN
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
DPLSRMTAYQEMKKDADDGSTIVLFSWMTKLFVIFLEVVPVLAKMFFAPPSGYAARVQAR
CHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
VSSDRLSSQLPKAPPVEARRPPVAPRLTVTPAVAARPVGTVGVARAQSGPTAAGAAVQPL
HHHHHHHHHCCCCCCCCCCCCCCCCCEEECCHHHHCCCCHHHHHHCCCCCCCCCHHHCCC
RSPPPPRPAQPAETTIPPIAAAKPAPSAAPARQLSVPVQSIAAQEEALGADMERLVREAQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHCHHHHHHHHHHH
ERQAGAIGSRVAVT
HHHHHCCCCCCCCC
>Mature Secondary Structure
MFQRVLNSIAGVDHETLASCPPTDRIWAAHLGAMLCISFIVVFGISFHAMGYMIADVGLQ
CHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VATSLVIATVVFMFDRALYQSDWFYQGLLRRSEDGIETERSWGQTLWRLLRVSARLTISF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
GLAWVIATFLELAIFSDSISERIEQNRVAANVPIVQKVELFEAQLAAEIERRRTSIEAME
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TALRNDFVTAPAVDQSVSVRSDEFEQRIKALDAEEQGLRAELKEIDKGILRYAAEENAEE
HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHH
TGQKISETNSGKSGIGPRYQFARRQRESLERQRDSRLSEVAQLNAKRDELRSAQARITSE
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAVIREQQIAGAKSKRESLQRQIDEARADLRQVEARKEARIDAFRREVMTNSHFQARTKN
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
DPLSRMTAYQEMKKDADDGSTIVLFSWMTKLFVIFLEVVPVLAKMFFAPPSGYAARVQAR
CHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
VSSDRLSSQLPKAPPVEARRPPVAPRLTVTPAVAARPVGTVGVARAQSGPTAAGAAVQPL
HHHHHHHHHCCCCCCCCCCCCCCCCCEEECCHHHHCCCCHHHHHHCCCCCCCCCHHHCCC
RSPPPPRPAQPAETTIPPIAAAKPAPSAAPARQLSVPVQSIAAQEEALGADMERLVREAQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHCHHHHHHHHHHH
ERQAGAIGSRVAVT
HHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA