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The map label for this gene is 86748222

Identifier: 86748222

GI number: 86748222

Start: 1258733

End: 1260013

Strand: Reverse

Name: 86748222

Synonym: RPB_1097

Alternate gene names: NA

Gene position: 1260013-1258733 (Counterclockwise)

Preceding gene: 86748230

Following gene: 86748213

Centisome position: 23.63

GC content: 68.31

Gene sequence:

>1281_bases
ATGATTGCGACGCCGTCTGTTCATAGTCTCGGCCTGCTGCTGCTGTTGAGTTTTTTTCTCGGCTTCGCGTTCGAGGATTT
CTTCGCGAAGACCAGCTCCGCACGGCCGGGCGGCATCCGCACCTTCCCGCTGCTCTCGCTCGGCGGCGGCATCCTTTATC
TGTTCGATCCGACACACCTGATCGCCTTCACTGGCGGACTGCTCGTGCTCGGCGCCTGGCTGGCGATGTTCTACGGCGTC
CATCTGCGCGAGCGCGACGAGAAAGGCGAGCGCAATGCCGGGCTGGTGGTGCTGCTGCTGAACGTGCACGCCTATCTGCT
CGGCGCGGTCGCGCTGGCGCTGCCGCATTGGATCGCGGTCGGCGTCACCGTGGTCGCGGTGCTGCTGCTGACCGGGCGCG
ACCGGCTGCACACGCTGGCGCGCCGCATCGACATGAAGGAAATCACCACGGCCGGTCAGTTCCTGATTCTGACCGGTGTG
GTGCTGCCGCTGCTGCCGGCCGAGCCGGTGACGACCCTCACCAGCATCACGCCGCGGCAGGCCTGGCTGGCGCTGACGCT
GGTCTGCACCCTGTCCTATGCGAGCTATCTGGCGCAGCGCTACTGGCCGCGGGCGGCGCGCGGGCTGTGGATGCCGGCGC
TGGGCGGGCTGTATTCGTCGACGGCCACCACCGTGGTGCTGGCGCGGCAGGCGAATGCCGACCCGGCCTCGCGACGGCAG
GCGCTGGCCGGGATCACGCTCGCCACCGGCATCATGTATCTGCGCATTCTGGCGATCATCGCGGTGTTCAATCTGGCGCT
GGCGCGCCAGCTCGTGGTGCCGATGGCCGGCCTCGCCGCCTTGGCGCTGTCGATCGCCGCGCTGCAATACTGGCTGATCA
AGGCGCCGGCCGCCGAAGCGCATGACGCAGCGGGGCGCGGCAACCCGCTCGAACTCGGCACCGCCGCGGCGTTCGCGGCG
ATGTTCGTGCTGATCTCGCTGGCCTCGACCTGGGTGAAGACGGAATTCGGCACCGAAGGCATCTATTGGCTGGCGGCGAT
CGTCGGCTTTGCCGACATCGATCCCTTCGTCCTCAATCTGGCGCAGGGCGGCACCGCCGGGATCGGCGACCACGCGGTCG
CGATCGCGGTGCTGATCGCGGCGTCGTCCAACAACATCCTGAAGGCGACCTACGCGCTGTCGTTCGGCGGCCGCGCGACG
CTGCAGAGCGCGCTGATGCTGGTGATACTGGCCGGGATCGGCGTCGTGCTCGCTGTGCTGCTCGCGCGCGGGACGCTCTG
A

Upstream 100 bases:

>100_bases
CAGTCCCGCATGTGCTGCTACAGTGCTGGATCGCCGAGCCGATCCCTGGTTCGGCAGCCGTTGATCGCGCTGGCCTCGCC
ACCGCATCGGCCGGGCCCCC

Downstream 100 bases:

>100_bases
GCCCCGCTCAACCGCCCTTCAGCATCGACAGCAGCGACGTGGTCGCCTTGTAGCTCTGCACCGCATTGTCGCGGAACGTC
GTCGTCCAGTTCGTCGCGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 426; Mature: 426

Protein sequence:

>426_residues
MIATPSVHSLGLLLLLSFFLGFAFEDFFAKTSSARPGGIRTFPLLSLGGGILYLFDPTHLIAFTGGLLVLGAWLAMFYGV
HLRERDEKGERNAGLVVLLLNVHAYLLGAVALALPHWIAVGVTVVAVLLLTGRDRLHTLARRIDMKEITTAGQFLILTGV
VLPLLPAEPVTTLTSITPRQAWLALTLVCTLSYASYLAQRYWPRAARGLWMPALGGLYSSTATTVVLARQANADPASRRQ
ALAGITLATGIMYLRILAIIAVFNLALARQLVVPMAGLAALALSIAALQYWLIKAPAAEAHDAAGRGNPLELGTAAAFAA
MFVLISLASTWVKTEFGTEGIYWLAAIVGFADIDPFVLNLAQGGTAGIGDHAVAIAVLIAASSNNILKATYALSFGGRAT
LQSALMLVILAGIGVVLAVLLARGTL

Sequences:

>Translated_426_residues
MIATPSVHSLGLLLLLSFFLGFAFEDFFAKTSSARPGGIRTFPLLSLGGGILYLFDPTHLIAFTGGLLVLGAWLAMFYGV
HLRERDEKGERNAGLVVLLLNVHAYLLGAVALALPHWIAVGVTVVAVLLLTGRDRLHTLARRIDMKEITTAGQFLILTGV
VLPLLPAEPVTTLTSITPRQAWLALTLVCTLSYASYLAQRYWPRAARGLWMPALGGLYSSTATTVVLARQANADPASRRQ
ALAGITLATGIMYLRILAIIAVFNLALARQLVVPMAGLAALALSIAALQYWLIKAPAAEAHDAAGRGNPLELGTAAAFAA
MFVLISLASTWVKTEFGTEGIYWLAAIVGFADIDPFVLNLAQGGTAGIGDHAVAIAVLIAASSNNILKATYALSFGGRAT
LQSALMLVILAGIGVVLAVLLARGTL
>Mature_426_residues
MIATPSVHSLGLLLLLSFFLGFAFEDFFAKTSSARPGGIRTFPLLSLGGGILYLFDPTHLIAFTGGLLVLGAWLAMFYGV
HLRERDEKGERNAGLVVLLLNVHAYLLGAVALALPHWIAVGVTVVAVLLLTGRDRLHTLARRIDMKEITTAGQFLILTGV
VLPLLPAEPVTTLTSITPRQAWLALTLVCTLSYASYLAQRYWPRAARGLWMPALGGLYSSTATTVVLARQANADPASRRQ
ALAGITLATGIMYLRILAIIAVFNLALARQLVVPMAGLAALALSIAALQYWLIKAPAAEAHDAAGRGNPLELGTAAAFAA
MFVLISLASTWVKTEFGTEGIYWLAAIVGFADIDPFVLNLAQGGTAGIGDHAVAIAVLIAASSNNILKATYALSFGGRAT
LQSALMLVILAGIGVVLAVLLARGTL

Specific function: Unknown

COG id: COG3174

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To P.aeruginosa PA0043 and M.thermoautotrophicum MTH1451 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44888; Mature: 44888

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIATPSVHSLGLLLLLSFFLGFAFEDFFAKTSSARPGGIRTFPLLSLGGGILYLFDPTHL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECHHHHCCCCEEEEECCHHH
IAFTGGLLVLGAWLAMFYGVHLRERDEKGERNAGLVVLLLNVHAYLLGAVALALPHWIAV
HHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHH
GVTVVAVLLLTGRDRLHTLARRIDMKEITTAGQFLILTGVVLPLLPAEPVTTLTSITPRQ
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHCCCHHH
AWLALTLVCTLSYASYLAQRYWPRAARGLWMPALGGLYSSTATTVVLARQANADPASRRQ
HHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHEEEEECCCCCHHHHHH
ALAGITLATGIMYLRILAIIAVFNLALARQLVVPMAGLAALALSIAALQYWLIKAPAAEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
HDAAGRGNPLELGTAAAFAAMFVLISLASTWVKTEFGTEGIYWLAAIVGFADIDPFVLNL
HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHH
AQGGTAGIGDHAVAIAVLIAASSNNILKATYALSFGGRATLQSALMLVILAGIGVVLAVL
HCCCCCCCCHHHHHHHHHHEECCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
LARGTL
HHCCCC
>Mature Secondary Structure
MIATPSVHSLGLLLLLSFFLGFAFEDFFAKTSSARPGGIRTFPLLSLGGGILYLFDPTHL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECHHHHCCCCEEEEECCHHH
IAFTGGLLVLGAWLAMFYGVHLRERDEKGERNAGLVVLLLNVHAYLLGAVALALPHWIAV
HHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHH
GVTVVAVLLLTGRDRLHTLARRIDMKEITTAGQFLILTGVVLPLLPAEPVTTLTSITPRQ
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHCCCHHH
AWLALTLVCTLSYASYLAQRYWPRAARGLWMPALGGLYSSTATTVVLARQANADPASRRQ
HHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHEEEEECCCCCHHHHHH
ALAGITLATGIMYLRILAIIAVFNLALARQLVVPMAGLAALALSIAALQYWLIKAPAAEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
HDAAGRGNPLELGTAAAFAAMFVLISLASTWVKTEFGTEGIYWLAAIVGFADIDPFVLNL
HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHH
AQGGTAGIGDHAVAIAVLIAASSNNILKATYALSFGGRATLQSALMLVILAGIGVVLAVL
HCCCCCCCCHHHHHHHHHHEECCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
LARGTL
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]