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The map label for this gene is 86748208

Identifier: 86748208

GI number: 86748208

Start: 1243046

End: 1243879

Strand: Reverse

Name: 86748208

Synonym: RPB_1083

Alternate gene names: NA

Gene position: 1243879-1243046 (Counterclockwise)

Preceding gene: 86748213

Following gene: 86748204

Centisome position: 23.33

GC content: 70.14

Gene sequence:

>834_bases
ATGACGCCCGAACCCGCGCCGAGTCTGAAGCAGCTGCTGGCATTCTATCTCGAGGCCGGGGTGGACTGCGCGCTGACCGA
CGAGCCGATCAACCGGATGCTCGACGACGAGACCGCCACGCCGGCCATAGCCGACGCGCCGGTCGCGCGGGCAGACACAA
TTCGGCCGCCGGCGCCGCGGCCGACAGCGTTGCCCGGCGTTGCGCCGCCGTCGCCGGAGGCCGCGATCGTGTCGGCCCGC
GAGGCCGCCGCCACCGCGCCGACGCTCGAAGCATTGCGCGCATTGATGGAGCAGTTCGAGGGTTGCGCGCTACGCTCGAC
GGCGACGCGGCTGGTGTTCGCCGACGGCAATCCGCAAGCGCGGCTGATGCTGGTCGGCGAAGCGCCGGGCCGCGAGGAGG
ATATCGAGGGGCTGCCCTTCGTCGGCCGCTCCGGCAAGCTGCTCGACCTGATGCTCGCGGCGATCGGCCTCGACCGCAGC
CAAGTCTACATCGCCAATGTGATCCCGTGGCGGCCGCCGGGCAATCGCACGCCGACGCCGCAGGAGACTCAGATCTGCCT
GCCGTTCATCAAGCGGCAGATCGAGCTCGTGAATCCCGCAATCCTGGTGACGCTCGGCAATCCCTCGACCCAGACGCTGC
TGTCCACCCGCGACGGCATCACCCGGACCCGCGGACGCTGGTTCGACTACGACAACGGCACGCGCATGATCCGCGCGATG
CCGACGCTGCACCCGGCCTATCTGTTGCGGCAGCCGACCTACAAGCGGCTGGCGTGGCAGGATCTTCGCGCGATCGCGAC
GGCGCTCGCGGCAAGCGAGTCGCCGGCGGACTGA

Upstream 100 bases:

>100_bases
GTTCCGGCTTTCATGCGGGGTTTTTCTCGGGCAGAGTCCGCTCTGCGAAACCGCCGGGCGCGTCCGGCCGTGCCCTCCCA
TCGCCGATCGACCGCCTATC

Downstream 100 bases:

>100_bases
TCGCGACGACAGCTACGGCGACGCCTTCGGCCGCACGATCGCCCAGCCGATCCGCAACGGCGGCTGGCGTCCGGCGATCA
TCCGCTCGAACGCGCGCGGC

Product: phage SPO1 DNA polymerase-related protein

Products: diphosphate; DNAn+1

Alternate protein names: Uracil-DNA Glycosylase; Phage SPO1 DNA Polymerase-Like Protein; DNA Polymerase; Uracil DNA Glycosylase Superfamily Protein; DNA Glycosylase; Uracil-DNA Glycosylase Family 4 Protein; Phage Spo1 DNA Polymerase-Related Protein; DNA-Directed DNA Polymerase; DNA Polymerase-Related Protein; Bacteriophage-Related DNA Polymerase; DNA Polymerase Bacteriophage-Type; N-Terminus Of Bacteriophage-Type DNA Polymerase; Bacteriophage-Type DNA Polymerase N-Terminal Domain Protein; DNA Polymerase Bacteriophage-Type Protein; Phage SPO1 DNA Polymerase Domain-Containing Protein; DNA Polymerase-Related Protein Bacteriophage-Type; Uracil-DNA Glycosylase C-Terminal; Phage SpO1 DNA Polymerase-Related Protein; DNA Polymerase Related Protein; Uracil-DNA Glycosylase Phage-Related Protein; Phage Shock Protein E; Phage DNA Polymerase; Phage Spo1 DNA Polymerase Domain Protein; Uracil-DNA Glycosylase C-Terminal Domain Protein; Uracil-DNA Glycosylase-Like Protein; Uracil-DNA Glycosylase-Related Protein; N-Terminus Of Phage SPO1 DNA Polymerase

Number of amino acids: Translated: 277; Mature: 276

Protein sequence:

>277_residues
MTPEPAPSLKQLLAFYLEAGVDCALTDEPINRMLDDETATPAIADAPVARADTIRPPAPRPTALPGVAPPSPEAAIVSAR
EAAATAPTLEALRALMEQFEGCALRSTATRLVFADGNPQARLMLVGEAPGREEDIEGLPFVGRSGKLLDLMLAAIGLDRS
QVYIANVIPWRPPGNRTPTPQETQICLPFIKRQIELVNPAILVTLGNPSTQTLLSTRDGITRTRGRWFDYDNGTRMIRAM
PTLHPAYLLRQPTYKRLAWQDLRAIATALAASESPAD

Sequences:

>Translated_277_residues
MTPEPAPSLKQLLAFYLEAGVDCALTDEPINRMLDDETATPAIADAPVARADTIRPPAPRPTALPGVAPPSPEAAIVSAR
EAAATAPTLEALRALMEQFEGCALRSTATRLVFADGNPQARLMLVGEAPGREEDIEGLPFVGRSGKLLDLMLAAIGLDRS
QVYIANVIPWRPPGNRTPTPQETQICLPFIKRQIELVNPAILVTLGNPSTQTLLSTRDGITRTRGRWFDYDNGTRMIRAM
PTLHPAYLLRQPTYKRLAWQDLRAIATALAASESPAD
>Mature_276_residues
TPEPAPSLKQLLAFYLEAGVDCALTDEPINRMLDDETATPAIADAPVARADTIRPPAPRPTALPGVAPPSPEAAIVSARE
AAATAPTLEALRALMEQFEGCALRSTATRLVFADGNPQARLMLVGEAPGREEDIEGLPFVGRSGKLLDLMLAAIGLDRSQ
VYIANVIPWRPPGNRTPTPQETQICLPFIKRQIELVNPAILVTLGNPSTQTLLSTRDGITRTRGRWFDYDNGTRMIRAMP
TLHPAYLLRQPTYKRLAWQDLRAIATALAASESPAD

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 29992; Mature: 29861

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPEPAPSLKQLLAFYLEAGVDCALTDEPINRMLDDETATPAIADAPVARADTIRPPAPR
CCCCCCHHHHHHHHHHHHHCCCEEECCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
PTALPGVAPPSPEAAIVSAREAAATAPTLEALRALMEQFEGCALRSTATRLVFADGNPQA
CCCCCCCCCCCCCHHEEEHHHHHHCCHHHHHHHHHHHHHCCCEEECCCEEEEEECCCCCE
RLMLVGEAPGREEDIEGLPFVGRSGKLLDLMLAAIGLDRSQVYIANVIPWRPPGNRTPTP
EEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCC
QETQICLPFIKRQIELVNPAILVTLGNPSTQTLLSTRDGITRTRGRWFDYDNGTRMIRAM
CCHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHCCCCHHCCCCEEECCCCCEEEEEC
PTLHPAYLLRQPTYKRLAWQDLRAIATALAASESPAD
CCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TPEPAPSLKQLLAFYLEAGVDCALTDEPINRMLDDETATPAIADAPVARADTIRPPAPR
CCCCCHHHHHHHHHHHHHCCCEEECCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
PTALPGVAPPSPEAAIVSAREAAATAPTLEALRALMEQFEGCALRSTATRLVFADGNPQA
CCCCCCCCCCCCCHHEEEHHHHHHCCHHHHHHHHHHHHHCCCEEECCCEEEEEECCCCCE
RLMLVGEAPGREEDIEGLPFVGRSGKLLDLMLAAIGLDRSQVYIANVIPWRPPGNRTPTP
EEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCC
QETQICLPFIKRQIELVNPAILVTLGNPSTQTLLSTRDGITRTRGRWFDYDNGTRMIRAM
CCHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHCCCCHHCCCCEEECCCCCEEEEEC
PTLHPAYLLRQPTYKRLAWQDLRAIATALAASESPAD
CCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA