| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86748204
Identifier: 86748204
GI number: 86748204
Start: 1238573
End: 1239136
Strand: Reverse
Name: 86748204
Synonym: RPB_1079
Alternate gene names: NA
Gene position: 1239136-1238573 (Counterclockwise)
Preceding gene: 86748208
Following gene: 86748203
Centisome position: 23.24
GC content: 71.81
Gene sequence:
>564_bases ATGCTGAGCGTCATCATTCCCACCGACGGAGTTGAGCGGACCGCGGTCGCCACCTTGGCGGCGCTGGTGCCTGGCGCTGC CGCCGGCGTCGTCCGCGAGGTGGTGCTGGTCGATCGCAAGAATGACGGGGTGATCGAGCGGGTCGCGGACGTCGCCGGCT GCGGCTTCCTCGCGGTGCAGGGCAGCCGCGCCGCGGCGCTGGCGGCGGGCGCGCGGCAGTCGCGGTCGCCATGGCTGATG TTCCTGCATGCCGGCGCGGTGCTGGACTCCGGCTGGATCGAGGAAACCTCGCAGTTCATCCAGGGCGTGTCGCTGAGCGG CCACCCCCGCGCGGGGATTTTCCGCTATGCGCGATCGCCCTATGCGGAGCCGAGCTGGCGCGAGACGTTCCGCAGCCTGC GCAGACAGATCGCGGGACCGCGGGCCGATCAGGGCCTACTGATCGCCCGCGACCACTACGACCAGCTCGGCGGTCACGAT CCGGAGCGCTCCGAGGCTCGGCTGCTGCGGCAGCTCGGCCGCTCGTCGCGCACCCTGCTGCGCAGCCGGATCGTGCTGGT CTGA
Upstream 100 bases:
>100_bases ACCGCCGCCTGCGATCTGTGCATCGCAATTCCCGGCTGATTTCGGCGGCACGAGGTGCTAAGCGTGCACCAAATGGTCGT AACCACGTCATTTGGCGGAC
Downstream 100 bases:
>100_bases CGGCAGCGCCGCTGCGCTTCCCTCCACGTTTCTATGAACTCTCTCCCCGCCCCGGCGCACCAGCCGAATGGTGTCCGCTC GAGGCAACTCGACGGCCCAA
Product: hypothetical protein
Products: NA
Alternate protein names: Glycosyl Transferase Family 2 Protein; Glycosyltransferase
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MLSVIIPTDGVERTAVATLAALVPGAAAGVVREVVLVDRKNDGVIERVADVAGCGFLAVQGSRAAALAAGARQSRSPWLM FLHAGAVLDSGWIEETSQFIQGVSLSGHPRAGIFRYARSPYAEPSWRETFRSLRRQIAGPRADQGLLIARDHYDQLGGHD PERSEARLLRQLGRSSRTLLRSRIVLV
Sequences:
>Translated_187_residues MLSVIIPTDGVERTAVATLAALVPGAAAGVVREVVLVDRKNDGVIERVADVAGCGFLAVQGSRAAALAAGARQSRSPWLM FLHAGAVLDSGWIEETSQFIQGVSLSGHPRAGIFRYARSPYAEPSWRETFRSLRRQIAGPRADQGLLIARDHYDQLGGHD PERSEARLLRQLGRSSRTLLRSRIVLV >Mature_187_residues MLSVIIPTDGVERTAVATLAALVPGAAAGVVREVVLVDRKNDGVIERVADVAGCGFLAVQGSRAAALAAGARQSRSPWLM FLHAGAVLDSGWIEETSQFIQGVSLSGHPRAGIFRYARSPYAEPSWRETFRSLRRQIAGPRADQGLLIARDHYDQLGGHD PERSEARLLRQLGRSSRTLLRSRIVLV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20234; Mature: 20234
Theoretical pI: Translated: 11.01; Mature: 11.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSVIIPTDGVERTAVATLAALVPGAAAGVVREVVLVDRKNDGVIERVADVAGCGFLAVQ CEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEC GSRAAALAAGARQSRSPWLMFLHAGAVLDSGWIEETSQFIQGVSLSGHPRAGIFRYARSP CCCHHHHHHCCCCCCCCEEEEEECCHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHCCC YAEPSWRETFRSLRRQIAGPRADQGLLIARDHYDQLGGHDPERSEARLLRQLGRSSRTLL CCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHCCCCCCHHHHHHHHHHCHHHHHHH RSRIVLV HHHHCCC >Mature Secondary Structure MLSVIIPTDGVERTAVATLAALVPGAAAGVVREVVLVDRKNDGVIERVADVAGCGFLAVQ CEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEC GSRAAALAAGARQSRSPWLMFLHAGAVLDSGWIEETSQFIQGVSLSGHPRAGIFRYARSP CCCHHHHHHCCCCCCCCEEEEEECCHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHCCC YAEPSWRETFRSLRRQIAGPRADQGLLIARDHYDQLGGHDPERSEARLLRQLGRSSRTLL CCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHCCCCCCHHHHHHHHHHCHHHHHHH RSRIVLV HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA