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The map label for this gene is ybfA [H]

Identifier: 86748203

GI number: 86748203

Start: 1237480

End: 1238403

Strand: Reverse

Name: ybfA [H]

Synonym: RPB_1078

Alternate gene names: 86748203

Gene position: 1238403-1237480 (Counterclockwise)

Preceding gene: 86748204

Following gene: 86748198

Centisome position: 23.23

GC content: 69.05

Gene sequence:

>924_bases
ATGTCCAGCCCCGTCCCGCCCGATCAGGTCGACACCGTCCGCGGCTTCAACCGGTTCTACACCCGCCGGCTCGGCGTGCT
CGAGCAGCATCTGCTGAATACGCCTTTCTCGCTCACCGAAGCCCGCGTGCTGTACGAGCTGGCGTATCGCGAGGCCCCGC
TCGCCAAGGAAATCGGCGCAGAGCTGGGCATCGACGCCGGCTATCTCAGCCGGATCCTGCAGAGCTTCGACGATCAGGGC
CTGATCAGCCGCAAGCCGTCGCCGGACGACCGGCGGCAGTCGCGGATCGGCCTGACGGCGAAAGGCCGGACCACCTACGG
CCGGCTCGAGCAGCGCTCGCAACAGGAGATCGCGGCGATGCTCGCGGGCCTGCAGCCGTCCGAGCGATCGCGTCTGGTGG
CGTCGATGACGACCATCGAGCGGCTGCTCCGCGCAGCCCCGTCCCAAGGCCCGGTCCTGCGCGGCCCGCAGCCCGGCGAC
ATCGGCTGGGTGGTGCAGAGCCACGGCGCGTTCTACGCCGCCGAATACGGTTTCGACACCTCGTTCGAGGCGCTGGTCGC
CGAGATCGCCGGCCGGTTTCTCGCCTCGCACGATCCCAGGCGCGAGCGCTGCTGGATCGCCGAGCTCGACGGCGCGCAGG
CCGGCTCGCTGTTTCTGGTGCAGGCCAGCGACGAGGTCGCCAAGCTGCGGCTGCTGCTGGTGACGCCGCAGGCGCGCGGC
CACCGGCTCGGGCAACGGATGGTGCAGGAGGCGATCTGCTTCGCCCGGCAATGCGGCTATCGCAAAGTGACGCTGTGGAC
CCAGAGCATCCTCGTCGCCGCGCGAAAAATCTATCAGGACGCCGGCTTCATCCTGGTCGCGACCGAGCCGCATCGCAGCT
TCGGCACCGACCTGATCGGCGAGACCTGGGAGCTGACACTGTAA

Upstream 100 bases:

>100_bases
GGTGTCCGCTCGAGGCAACTCGACGGCCCAAGCCGCTTCGCAAAAATTACTTGCCATCGGCAACTATATATTTGACAATG
GCAACCATTGAGGAGTTGCC

Downstream 100 bases:

>100_bases
TGGCGCCGCGTCGCGACCAGTCGCGGCGCGTCACACCCGAACTGATCGCGTTCCACGCCCGGCGTGGGCGGGAGCTGCAA
CGCGTCGCGATCCATGCGGC

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 306

Protein sequence:

>307_residues
MSSPVPPDQVDTVRGFNRFYTRRLGVLEQHLLNTPFSLTEARVLYELAYREAPLAKEIGAELGIDAGYLSRILQSFDDQG
LISRKPSPDDRRQSRIGLTAKGRTTYGRLEQRSQQEIAAMLAGLQPSERSRLVASMTTIERLLRAAPSQGPVLRGPQPGD
IGWVVQSHGAFYAAEYGFDTSFEALVAEIAGRFLASHDPRRERCWIAELDGAQAGSLFLVQASDEVAKLRLLLVTPQARG
HRLGQRMVQEAICFARQCGYRKVTLWTQSILVAARKIYQDAGFILVATEPHRSFGTDLIGETWELTL

Sequences:

>Translated_307_residues
MSSPVPPDQVDTVRGFNRFYTRRLGVLEQHLLNTPFSLTEARVLYELAYREAPLAKEIGAELGIDAGYLSRILQSFDDQG
LISRKPSPDDRRQSRIGLTAKGRTTYGRLEQRSQQEIAAMLAGLQPSERSRLVASMTTIERLLRAAPSQGPVLRGPQPGD
IGWVVQSHGAFYAAEYGFDTSFEALVAEIAGRFLASHDPRRERCWIAELDGAQAGSLFLVQASDEVAKLRLLLVTPQARG
HRLGQRMVQEAICFARQCGYRKVTLWTQSILVAARKIYQDAGFILVATEPHRSFGTDLIGETWELTL
>Mature_306_residues
SSPVPPDQVDTVRGFNRFYTRRLGVLEQHLLNTPFSLTEARVLYELAYREAPLAKEIGAELGIDAGYLSRILQSFDDQGL
ISRKPSPDDRRQSRIGLTAKGRTTYGRLEQRSQQEIAAMLAGLQPSERSRLVASMTTIERLLRAAPSQGPVLRGPQPGDI
GWVVQSHGAFYAAEYGFDTSFEALVAEIAGRFLASHDPRRERCWIAELDGAQAGSLFLVQASDEVAKLRLLLVTPQARGH
RLGQRMVQEAICFARQCGYRKVTLWTQSILVAARKIYQDAGFILVATEPHRSFGTDLIGETWELTL

Specific function: Putative DNA-binding acetyltransferase (Potential) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 N-acetyltransferase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000182
- InterPro:   IPR016181
- InterPro:   IPR000835
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00583 Acetyltransf_1; PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 34187; Mature: 34056

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSPVPPDQVDTVRGFNRFYTRRLGVLEQHLLNTPFSLTEARVLYELAYREAPLAKEIGA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHH
ELGIDAGYLSRILQSFDDQGLISRKPSPDDRRQSRIGLTAKGRTTYGRLEQRSQQEIAAM
HCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCEECCCCHHHHHHHHHHHHHHHH
LAGLQPSERSRLVASMTTIERLLRAAPSQGPVLRGPQPGDIGWVVQSHGAFYAAEYGFDT
HHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCC
SFEALVAEIAGRFLASHDPRRERCWIAELDGAQAGSLFLVQASDEVAKLRLLLVTPQARG
HHHHHHHHHHHHHHHCCCCCHHCCEEEECCCCCCCCEEEEECCCCCEEEEEEEECCCHHH
HRLGQRMVQEAICFARQCGYRKVTLWTQSILVAARKIYQDAGFILVATEPHRSFGTDLIG
HHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHCCCEEEEEECCCHHHCHHHCC
ETWELTL
CCEEECC
>Mature Secondary Structure 
SSPVPPDQVDTVRGFNRFYTRRLGVLEQHLLNTPFSLTEARVLYELAYREAPLAKEIGA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHH
ELGIDAGYLSRILQSFDDQGLISRKPSPDDRRQSRIGLTAKGRTTYGRLEQRSQQEIAAM
HCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCEECCCCHHHHHHHHHHHHHHHH
LAGLQPSERSRLVASMTTIERLLRAAPSQGPVLRGPQPGDIGWVVQSHGAFYAAEYGFDT
HHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCC
SFEALVAEIAGRFLASHDPRRERCWIAELDGAQAGSLFLVQASDEVAKLRLLLVTPQARG
HHHHHHHHHHHHHHHCCCCCHHCCEEEECCCCCCCCEEEEECCCCCEEEEEEEECCCHHH
HRLGQRMVQEAICFARQCGYRKVTLWTQSILVAARKIYQDAGFILVATEPHRSFGTDLIG
HHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHCCCEEEEEECCCHHHCHHHCC
ETWELTL
CCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]