| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is cyp130 [H]
Identifier: 86748187
GI number: 86748187
Start: 1216446
End: 1217681
Strand: Direct
Name: cyp130 [H]
Synonym: RPB_1062
Alternate gene names: 86748187
Gene position: 1216446-1217681 (Clockwise)
Preceding gene: 86748186
Following gene: 86748195
Centisome position: 22.82
GC content: 67.48
Gene sequence:
>1236_bases ATGACGCGGTGGGAGGTGCAGCCGCATCAACACCCGAGGAATCGCCCGATGTTCAGCTTCGATCCCTACTCCCCCGCGGT CGATGCCGACCCCTTTCCGCTGTACAAGACCCTGCGCGACGAGCATCCGGTGTATTGGAGCGAACCGGCGCAGATGTGGG TGCTGTCGCGCTACATCGACGTCGCCTCCGCCGGCACCAATTGGCAGGTGTTCTCCTCGGCCAAGGGCAATCTGATGACC GAGCTGCCGGGCCGCGCCGGCGCCACGCTCGGCACCACCGACCCGCCGCGCCACGACCGGCTGCGCGGTCTCGTCCAGCA CGCCTTCATGAAGCGCAATCTCGAGGCGCTGGCCGAGCCGATGCGCGACATCGCGCGCGAGGCGGCCGAGGCGCTGCGCG GCCGCGAGCAGTTCGACTTCATCGCCGACTTCTCGTCGAAATTCACCGTGCGGGTGCTGTTCGCCGCCTTGGGCCTGCCG CTCGGCGACGAGCAGACGGTGCGCGACAAGGCGGTGCTGATGGTGCAGAGCGACCCGGTCAGCCGCGCCAAGGGGCCGGA ACATCTCGCCGCCTATGCGTGGATGCAGGACTACGCGGCCAAGGTGATCGCGCAGCGGCGCGCCGAACCACAGAACGACC TGATCTCGCATTTCAGCATGGCGGAGATCGACGGCGACAAATTGGACGAGCGCGAGGTGCTGCTGACGACGACGACGCTG ATCATGGCCGGGATCGAATCGCTCGGCGGCTTCATGAGCATGCTGGCGCTGAATCTCGCCGACTATGCCGATGCCCGCCG CGCGGTGGTCGCCGATCCGGCGCGGCTGCCGGACGCGGTCGAGGAGTCGCTGCGCTACAACACCTCGGCGCAGCGCTTCA AACGCTGCCTGCAGACCGACCTGACGCTGCACGGCGTCACCATGAAGGCCGGCGATTTCGTCTGCCTCGCCTACGGCTCC GCCAATCGCGACGAGCGGCAGTTTCCCAATCCGGACGTCTACGATCTGGCGCGCAAGCCGAAGGGCCATCTCGGCTTCGG CGGCGGCGTCCACGGCTGCCTCGGCTCGGCGATCGCCAGAATGGCGATCAAAATCGCGTTCGACGAGTTTCACAAGGTGG TGCCGGACTACACGCGGGTGCAGCCGCGGCTCGACTGGATGCCGTCCTCGACCTTCCGCAGCCCGCTGCGGCTGGAGATG GCGGTCGAGCGTGCAGAATCACGCAACGCGGCGTAG
Upstream 100 bases:
>100_bases TCGCCCAACCAACCACCGTCATGCCCGGGCTTGACCCGGGCATCCACGAAGCCAAGCAGCGCGGTGCCTGTTGACGTCGA TGGCCGGGTCAAGCCCGGCC
Downstream 100 bases:
>100_bases CGCCGTGCGATCGCGTCATTGCGAGGAGCGGAGCGACGAAGCAATCCAGCGCCGTGCATAGCGTCTCTGGATTGCTTCGC TGCGCGCGCAATGACGTTCA
Product: cytochrome P450
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 411; Mature: 410
Protein sequence:
>411_residues MTRWEVQPHQHPRNRPMFSFDPYSPAVDADPFPLYKTLRDEHPVYWSEPAQMWVLSRYIDVASAGTNWQVFSSAKGNLMT ELPGRAGATLGTTDPPRHDRLRGLVQHAFMKRNLEALAEPMRDIAREAAEALRGREQFDFIADFSSKFTVRVLFAALGLP LGDEQTVRDKAVLMVQSDPVSRAKGPEHLAAYAWMQDYAAKVIAQRRAEPQNDLISHFSMAEIDGDKLDEREVLLTTTTL IMAGIESLGGFMSMLALNLADYADARRAVVADPARLPDAVEESLRYNTSAQRFKRCLQTDLTLHGVTMKAGDFVCLAYGS ANRDERQFPNPDVYDLARKPKGHLGFGGGVHGCLGSAIARMAIKIAFDEFHKVVPDYTRVQPRLDWMPSSTFRSPLRLEM AVERAESRNAA
Sequences:
>Translated_411_residues MTRWEVQPHQHPRNRPMFSFDPYSPAVDADPFPLYKTLRDEHPVYWSEPAQMWVLSRYIDVASAGTNWQVFSSAKGNLMT ELPGRAGATLGTTDPPRHDRLRGLVQHAFMKRNLEALAEPMRDIAREAAEALRGREQFDFIADFSSKFTVRVLFAALGLP LGDEQTVRDKAVLMVQSDPVSRAKGPEHLAAYAWMQDYAAKVIAQRRAEPQNDLISHFSMAEIDGDKLDEREVLLTTTTL IMAGIESLGGFMSMLALNLADYADARRAVVADPARLPDAVEESLRYNTSAQRFKRCLQTDLTLHGVTMKAGDFVCLAYGS ANRDERQFPNPDVYDLARKPKGHLGFGGGVHGCLGSAIARMAIKIAFDEFHKVVPDYTRVQPRLDWMPSSTFRSPLRLEM AVERAESRNAA >Mature_410_residues TRWEVQPHQHPRNRPMFSFDPYSPAVDADPFPLYKTLRDEHPVYWSEPAQMWVLSRYIDVASAGTNWQVFSSAKGNLMTE LPGRAGATLGTTDPPRHDRLRGLVQHAFMKRNLEALAEPMRDIAREAAEALRGREQFDFIADFSSKFTVRVLFAALGLPL GDEQTVRDKAVLMVQSDPVSRAKGPEHLAAYAWMQDYAAKVIAQRRAEPQNDLISHFSMAEIDGDKLDEREVLLTTTTLI MAGIESLGGFMSMLALNLADYADARRAVVADPARLPDAVEESLRYNTSAQRFKRCLQTDLTLHGVTMKAGDFVCLAYGSA NRDERQFPNPDVYDLARKPKGHLGFGGGVHGCLGSAIARMAIKIAFDEFHKVVPDYTRVQPRLDWMPSSTFRSPLRLEMA VERAESRNAA
Specific function: Unknown
COG id: COG2124
COG function: function code Q; Cytochrome P450
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome P450 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001128 - InterPro: IPR002397 - InterPro: IPR017972 [H]
Pfam domain/function: PF00067 p450 [H]
EC number: NA
Molecular weight: Translated: 46041; Mature: 45910
Theoretical pI: Translated: 6.92; Mature: 6.92
Prosite motif: PS00086 CYTOCHROME_P450
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRWEVQPHQHPRNRPMFSFDPYSPAVDADPFPLYKTLRDEHPVYWSEPAQMWVLSRYID CCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHCCCCCEEECCHHHHHHHHHHHH VASAGTNWQVFSSAKGNLMTELPGRAGATLGTTDPPRHDRLRGLVQHAFMKRNLEALAEP HHCCCCCCEEECCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH MRDIAREAAEALRGREQFDFIADFSSKFTVRVLFAALGLPLGDEQTVRDKAVLMVQSDPV HHHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHCCCEEEEEECCCC SRAKGPEHLAAYAWMQDYAAKVIAQRRAEPQNDLISHFSMAEIDGDKLDEREVLLTTTTL CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH IMAGIESLGGFMSMLALNLADYADARRAVVADPARLPDAVEESLRYNTSAQRFKRCLQTD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHC LTLHGVTMKAGDFVCLAYGSANRDERQFPNPDVYDLARKPKGHLGFGGGVHGCLGSAIAR CEEEEEEEECCCEEEEEECCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHH MAIKIAFDEFHKVVPDYTRVQPRLDWMPSSTFRSPLRLEMAVERAESRNAA HHHHHHHHHHHHHCCCHHHCCCCCCCCCCHHHCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure TRWEVQPHQHPRNRPMFSFDPYSPAVDADPFPLYKTLRDEHPVYWSEPAQMWVLSRYID CCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHCCCCCEEECCHHHHHHHHHHHH VASAGTNWQVFSSAKGNLMTELPGRAGATLGTTDPPRHDRLRGLVQHAFMKRNLEALAEP HHCCCCCCEEECCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH MRDIAREAAEALRGREQFDFIADFSSKFTVRVLFAALGLPLGDEQTVRDKAVLMVQSDPV HHHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHCCCEEEEEECCCC SRAKGPEHLAAYAWMQDYAAKVIAQRRAEPQNDLISHFSMAEIDGDKLDEREVLLTTTTL CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH IMAGIESLGGFMSMLALNLADYADARRAVVADPARLPDAVEESLRYNTSAQRFKRCLQTD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHC LTLHGVTMKAGDFVCLAYGSANRDERQFPNPDVYDLARKPKGHLGFGGGVHGCLGSAIAR CEEEEEEEECCCEEEEEECCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHH MAIKIAFDEFHKVVPDYTRVQPRLDWMPSSTFRSPLRLEMAVERAESRNAA HHHHHHHHHHHHHCCCHHHCCCCCCCCCCHHHCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]