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The map label for this gene is 86748159

Identifier: 86748159

GI number: 86748159

Start: 1187399

End: 1189594

Strand: Direct

Name: 86748159

Synonym: RPB_1034

Alternate gene names: NA

Gene position: 1187399-1189594 (Clockwise)

Preceding gene: 86748157

Following gene: 86748162

Centisome position: 22.27

GC content: 67.76

Gene sequence:

>2196_bases
ATGCTGTCGGACGTGATCCCGCTATCAATTTCCGAAGACGCTGTCGCCGCAGCGGAATCGCCGTTCTACATTCCGATGAC
CGGGCCGTCGCGCCCGCGCACCGCCCTGAAACACGACGACACCTTCCTGGTGCTCGACAGCCACGGCGATATCGGCGCGG
CGGCCGGCGGCAGCGACGGGCTGTTCAACGCCGATACGCGCTATCTCGCGCGGCTGCAGCTCCGCCTCGACGACATGCAG
CCGCTGCTGCTCGGCTCCAATCTGCGCGACGACAATTCGGCGCTCACCGTCGACCTCACCAATCCGGACATCTATCGCGA
CGGCCGCCTGGTGCTGGCGAAGGATCTGCTGCACATCGTGCGCACGATCTTCCTGTGGCGCGGCACCGCGTTTCAACGGA
TCGGGCTGCAGAACCACGGCGACGCCGAAGCCAGCTTCGAGCTCTCGCTCGATTTCGACACCGACTTCGCCGATCTGTTC
GAGGTGCGCGGCAGCGTCCGGCCGCGGCGCGGCGAGCGCGCGAGCCGGCGGTTGTCGCCGTGCGATGTCGCGTTCGATTA
TCGCGGGCTCGACGACACCAGCCGTGGCACCGCGATGCACTTCGATCCGGCGCCGGCGCGGCTCGAGGTCAACCGCGCGG
TGTATCAGTTCACGCTGGCGCCGCAGCAGACGGCGTCGGTGTTCCTGGCCGTGAGTTGCAACAGGCCGGCGACGCAGCAG
CTGATGCCGTTCTTCCAGAGCCTGCTGGCGCATCGGCGCGAGATGCGGCAGGCGACGCTGGGCGTCACCACCGTCGAGAC
GTCGAACGACATTTTCAACGAGGTGCTGTGCCAGGCGATGGCCGACCTCAACATGCTGACGACGGAGACGCCGCAGGGCC
GCTATCCGTATGCGGGAATTCCCTGGTATTCGACCACGTTCGGCCGCGACGGGCTGATCACCGCGTTGCAGATGTTGTGG
ATCGATCCGCGGATCGCGCGCGGCGTGTTGCGGCGGCTCGCGGCGCATCAGGCGACGGCGGTCGATCCGCTCAACGACGC
CGAGCCGGGCAAGATCCTGCACGAGATGCGCGGCGGCGAGATGGCGGCGCTGCGCGAGGTGCCGTTCGCGCAATATTACG
GCAGCGTGGATTCGACGCCGCTGTTCGTGATGCTGGCGGGCCTCTATGTCGAGCGCACCGGCGACGACTCGACGTTGAAG
GAACTGTGGCCTGCGATCGAGAAGGCGATCGGCTGGATCGACGGACCCGGCGATCCGGATCGCGACGGCTTCGTCGAGTA
TCAGCGCGCCACCGATCAAGGTCTGCAGAACCAGGGCTGGAAGGACTCCTACGACGCGATTTTCCACGCCGACGGCAAGC
TCGCCGAGGGCAATATCGCGCTCGCCGAAGTGCAGGGCTATGTGTTCGCCGCCAAGCGGCTCGCCGCGCTCTGCGCCCAT
CGGCTGGGCCTGGTGGCGCGGGCCGAGCAGCTCGAGCAGCAGGCCGAGCAACTCGCCGCCCGGTTCGAGCGCGCATTCTG
GTGCGAGGAACTCGGCACCTATGCGGTCGCGCTCGACGGCGCCAAGCGGCCGTGCAAGGTGCGCAGCTCGAACGCCGGGC
AGTTGCTGTTCACCGGCATCGTCCGGCCCGATCGCGCGCGGCTGGTCGCGACCGATCTGATGCGGCCGCATTTCTTCTCC
GGCTGGGGCATCCGCACCATCGCCTGCGGCGAGGCGCGCTACAATCCGATGTCGTATCACGACGGCTCGATCTGGCCGCA
CGACAATGCGATCATCGTGCTCGGGCTGGCGCGTTACGGCTTCAAGGCCGCGGTCGAGAAGGTGTTCAAGGGGCTGTTCG
AGGCGGCGTCCTACATGGAGCTGCGCCGGCTGCCGGAACTGTTCTGCGGCTTCCAGCGCGAGCGGCGCCGCGGCCCGACG
CTGTATCCGGTGGCCTGCGCGCCGCAGGCCTGGGCCAGCGCCACGCCGTTCACGCTGGTCGAAGCTGCGCTCGGCGTGCA
GTTCAACGCCGACCGCCGCGAGATCCGTCTGGTCAATCCGCGGCTGCCGGCGTTCCTCAACGAAGTCGTGCTGCGCGATC
TGCGTCTCGGCGATTCCAGCGTCGATCTGCGGATCCGGCGGCACGGCGAGGGCGTCTCGATGGAGGTGCTGCGCACCGAC
GGACGGATTCAGGTTTCGATCGTCCTGGCCCGCTGA

Upstream 100 bases:

>100_bases
GCGCGATCGGCCGGGCTGGTGACGAACGGCGCCTGAAACCGTCGCGTTTGCGTCCCCGGCGACTTCGGTCGCATAGTCAA
GTCGCAGTTAGGGTCGATCG

Downstream 100 bases:

>100_bases
GGGCCGCTCGGATCTTCCTGGCCGTCACCGGCGTGTGGCCTGCCGATGCCGAAACATCCGGCAGGTCGAGCGCCCGCGCG
ACCGAGCCTCGGTCGACGCG

Product: Amylo-alpha-1,6-glucosidase

Products: NA

Alternate protein names: Amylo-Alpha-1 6-Glucosidase; Glycogen Debranching; Glycogen Debranching Protein; Amylo-Alpha-1 6-Glucosidase Family; Glycogen Debranching Family Protein; LOW QUALITY PROTEIN Amylo-Alpha-1 6-Glucosidase; Neutral Invertase; Glycoside Transferase; Amylo-Alpha-1 6-Glucosidase Protein; Amylo-Alpha-1 6-Glucosidase Family Protein

Number of amino acids: Translated: 731; Mature: 731

Protein sequence:

>731_residues
MLSDVIPLSISEDAVAAAESPFYIPMTGPSRPRTALKHDDTFLVLDSHGDIGAAAGGSDGLFNADTRYLARLQLRLDDMQ
PLLLGSNLRDDNSALTVDLTNPDIYRDGRLVLAKDLLHIVRTIFLWRGTAFQRIGLQNHGDAEASFELSLDFDTDFADLF
EVRGSVRPRRGERASRRLSPCDVAFDYRGLDDTSRGTAMHFDPAPARLEVNRAVYQFTLAPQQTASVFLAVSCNRPATQQ
LMPFFQSLLAHRREMRQATLGVTTVETSNDIFNEVLCQAMADLNMLTTETPQGRYPYAGIPWYSTTFGRDGLITALQMLW
IDPRIARGVLRRLAAHQATAVDPLNDAEPGKILHEMRGGEMAALREVPFAQYYGSVDSTPLFVMLAGLYVERTGDDSTLK
ELWPAIEKAIGWIDGPGDPDRDGFVEYQRATDQGLQNQGWKDSYDAIFHADGKLAEGNIALAEVQGYVFAAKRLAALCAH
RLGLVARAEQLEQQAEQLAARFERAFWCEELGTYAVALDGAKRPCKVRSSNAGQLLFTGIVRPDRARLVATDLMRPHFFS
GWGIRTIACGEARYNPMSYHDGSIWPHDNAIIVLGLARYGFKAAVEKVFKGLFEAASYMELRRLPELFCGFQRERRRGPT
LYPVACAPQAWASATPFTLVEAALGVQFNADRREIRLVNPRLPAFLNEVVLRDLRLGDSSVDLRIRRHGEGVSMEVLRTD
GRIQVSIVLAR

Sequences:

>Translated_731_residues
MLSDVIPLSISEDAVAAAESPFYIPMTGPSRPRTALKHDDTFLVLDSHGDIGAAAGGSDGLFNADTRYLARLQLRLDDMQ
PLLLGSNLRDDNSALTVDLTNPDIYRDGRLVLAKDLLHIVRTIFLWRGTAFQRIGLQNHGDAEASFELSLDFDTDFADLF
EVRGSVRPRRGERASRRLSPCDVAFDYRGLDDTSRGTAMHFDPAPARLEVNRAVYQFTLAPQQTASVFLAVSCNRPATQQ
LMPFFQSLLAHRREMRQATLGVTTVETSNDIFNEVLCQAMADLNMLTTETPQGRYPYAGIPWYSTTFGRDGLITALQMLW
IDPRIARGVLRRLAAHQATAVDPLNDAEPGKILHEMRGGEMAALREVPFAQYYGSVDSTPLFVMLAGLYVERTGDDSTLK
ELWPAIEKAIGWIDGPGDPDRDGFVEYQRATDQGLQNQGWKDSYDAIFHADGKLAEGNIALAEVQGYVFAAKRLAALCAH
RLGLVARAEQLEQQAEQLAARFERAFWCEELGTYAVALDGAKRPCKVRSSNAGQLLFTGIVRPDRARLVATDLMRPHFFS
GWGIRTIACGEARYNPMSYHDGSIWPHDNAIIVLGLARYGFKAAVEKVFKGLFEAASYMELRRLPELFCGFQRERRRGPT
LYPVACAPQAWASATPFTLVEAALGVQFNADRREIRLVNPRLPAFLNEVVLRDLRLGDSSVDLRIRRHGEGVSMEVLRTD
GRIQVSIVLAR
>Mature_731_residues
MLSDVIPLSISEDAVAAAESPFYIPMTGPSRPRTALKHDDTFLVLDSHGDIGAAAGGSDGLFNADTRYLARLQLRLDDMQ
PLLLGSNLRDDNSALTVDLTNPDIYRDGRLVLAKDLLHIVRTIFLWRGTAFQRIGLQNHGDAEASFELSLDFDTDFADLF
EVRGSVRPRRGERASRRLSPCDVAFDYRGLDDTSRGTAMHFDPAPARLEVNRAVYQFTLAPQQTASVFLAVSCNRPATQQ
LMPFFQSLLAHRREMRQATLGVTTVETSNDIFNEVLCQAMADLNMLTTETPQGRYPYAGIPWYSTTFGRDGLITALQMLW
IDPRIARGVLRRLAAHQATAVDPLNDAEPGKILHEMRGGEMAALREVPFAQYYGSVDSTPLFVMLAGLYVERTGDDSTLK
ELWPAIEKAIGWIDGPGDPDRDGFVEYQRATDQGLQNQGWKDSYDAIFHADGKLAEGNIALAEVQGYVFAAKRLAALCAH
RLGLVARAEQLEQQAEQLAARFERAFWCEELGTYAVALDGAKRPCKVRSSNAGQLLFTGIVRPDRARLVATDLMRPHFFS
GWGIRTIACGEARYNPMSYHDGSIWPHDNAIIVLGLARYGFKAAVEKVFKGLFEAASYMELRRLPELFCGFQRERRRGPT
LYPVACAPQAWASATPFTLVEAALGVQFNADRREIRLVNPRLPAFLNEVVLRDLRLGDSSVDLRIRRHGEGVSMEVLRTD
GRIQVSIVLAR

Specific function: Unknown

COG id: COG3408

COG function: function code G; Glycogen debranching enzyme

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 81301; Mature: 81301

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSDVIPLSISEDAVAAAESPFYIPMTGPSRPRTALKHDDTFLVLDSHGDIGAAAGGSDG
CCCCCCCCCCCCCHHHHCCCCEEEECCCCCCCCCHHCCCCEEEEEECCCCCCCCCCCCCC
LFNADTRYLARLQLRLDDMQPLLLGSNLRDDNSALTVDLTNPDIYRDGRLVLAKDLLHIV
CCCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCEEEEEECCCCEECCCCCHHHHHHHHHH
RTIFLWRGTAFQRIGLQNHGDAEASFELSLDFDTDFADLFEVRGSVRPRRGERASRRLSP
HHHHHHCCCHHHCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHCCCCCCCCCHHHHCCCC
CDVAFDYRGLDDTSRGTAMHFDPAPARLEVNRAVYQFTLAPQQTASVFLAVSCNRPATQQ
CCEEEECCCCCCCCCCCEEEECCCCCEEEECEEEEEEEECCCCCCEEEEEEECCCCCHHH
LMPFFQSLLAHRREMRQATLGVTTVETSNDIFNEVLCQAMADLNMLTTETPQGRYPYAGI
HHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHCCHHEECCCCCCCCCCCCC
PWYSTTFGRDGLITALQMLWIDPRIARGVLRRLAAHQATAVDPLNDAEPGKILHEMRGGE
CCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCC
MAALREVPFAQYYGSVDSTPLFVMLAGLYVERTGDDSTLKELWPAIEKAIGWIDGPGDPD
CHHHHHCCHHHHCCCCCCCHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHCCCCCCCCCC
RDGFVEYQRATDQGLQNQGWKDSYDAIFHADGKLAEGNIALAEVQGYVFAAKRLAALCAH
CCCHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEHHHHHHHHHHHHHHHHH
RLGLVARAEQLEQQAEQLAARFERAFWCEELGTYAVALDGAKRPCKVRSSNAGQLLFTGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCEECCCCCCEEEEEEC
VRPDRARLVATDLMRPHFFSGWGIRTIACGEARYNPMSYHDGSIWPHDNAIIVLGLARYG
CCCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEHHHHH
FKAAVEKVFKGLFEAASYMELRRLPELFCGFQRERRRGPTLYPVACAPQAWASATPFTLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCEEEEECCCHHHCCCCCHHHH
EAALGVQFNADRREIRLVNPRLPAFLNEVVLRDLRLGDSSVDLRIRRHGEGVSMEVLRTD
HHHHCCEECCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEECC
GRIQVSIVLAR
CEEEEEEEEEC
>Mature Secondary Structure
MLSDVIPLSISEDAVAAAESPFYIPMTGPSRPRTALKHDDTFLVLDSHGDIGAAAGGSDG
CCCCCCCCCCCCCHHHHCCCCEEEECCCCCCCCCHHCCCCEEEEEECCCCCCCCCCCCCC
LFNADTRYLARLQLRLDDMQPLLLGSNLRDDNSALTVDLTNPDIYRDGRLVLAKDLLHIV
CCCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCEEEEEECCCCEECCCCCHHHHHHHHHH
RTIFLWRGTAFQRIGLQNHGDAEASFELSLDFDTDFADLFEVRGSVRPRRGERASRRLSP
HHHHHHCCCHHHCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHCCCCCCCCCHHHHCCCC
CDVAFDYRGLDDTSRGTAMHFDPAPARLEVNRAVYQFTLAPQQTASVFLAVSCNRPATQQ
CCEEEECCCCCCCCCCCEEEECCCCCEEEECEEEEEEEECCCCCCEEEEEEECCCCCHHH
LMPFFQSLLAHRREMRQATLGVTTVETSNDIFNEVLCQAMADLNMLTTETPQGRYPYAGI
HHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHCCHHEECCCCCCCCCCCCC
PWYSTTFGRDGLITALQMLWIDPRIARGVLRRLAAHQATAVDPLNDAEPGKILHEMRGGE
CCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCC
MAALREVPFAQYYGSVDSTPLFVMLAGLYVERTGDDSTLKELWPAIEKAIGWIDGPGDPD
CHHHHHCCHHHHCCCCCCCHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHCCCCCCCCCC
RDGFVEYQRATDQGLQNQGWKDSYDAIFHADGKLAEGNIALAEVQGYVFAAKRLAALCAH
CCCHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEHHHHHHHHHHHHHHHHH
RLGLVARAEQLEQQAEQLAARFERAFWCEELGTYAVALDGAKRPCKVRSSNAGQLLFTGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCEECCCCCCEEEEEEC
VRPDRARLVATDLMRPHFFSGWGIRTIACGEARYNPMSYHDGSIWPHDNAIIVLGLARYG
CCCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEHHHHH
FKAAVEKVFKGLFEAASYMELRRLPELFCGFQRERRRGPTLYPVACAPQAWASATPFTLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCEEEEECCCHHHCCCCCHHHH
EAALGVQFNADRREIRLVNPRLPAFLNEVVLRDLRLGDSSVDLRIRRHGEGVSMEVLRTD
HHHHCCEECCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEECC
GRIQVSIVLAR
CEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA